RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.97
SMCO3-201ENST00000316048 DCAF8Q5TAQ9 597 aa9.01□□□□□ -0.97
SMCO3-201ENST00000316048 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
SMCO3-201ENST00000316048 GSE1Q14687 1217 aa9□□□□□ -0.97
SMCO3-201ENST00000316048 AKT1S1Q96B36 256 aa9□□□□□ -0.97
SMCO3-201ENST00000316048 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
SMCO3-201ENST00000316048 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
SMCO3-201ENST00000316048 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
SMCO3-201ENST00000316048 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
SMCO3-201ENST00000316048 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
SMCO3-201ENST00000316048 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.98
SMCO3-201ENST00000316048 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
SMCO3-201ENST00000316048 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
SMCO3-201ENST00000316048 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
SMCO3-201ENST00000316048 STK25O00506 426 aa8.91□□□□□ -0.98
SMCO3-201ENST00000316048 PITPNM1O00562 1244 aa8.9□□□□□ -0.98
SMCO3-201ENST00000316048 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.99
SMCO3-201ENST00000316048 PYGBP11216 843 aa8.89□□□□□ -0.99
SMCO3-201ENST00000316048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.86□□□□□ -0.99
SMCO3-201ENST00000316048 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
SMCO3-201ENST00000316048 ZFP91Q96JP5 570 aaPredicted RBP8.86□□□□□ -0.99
SMCO3-201ENST00000316048 BCL11BQ9C0K0 894 aaPredicted RBP8.85□□□□□ -0.99
SMCO3-201ENST00000316048 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
SMCO3-201ENST00000316048 STK24Q9Y6E0 443 aa8.84□□□□□ -0.99
SMCO3-201ENST00000316048 CHRM1P11229 460 aaPredicted RBP8.83□□□□□ -1
SMCO3-201ENST00000316048 NBR1Q14596 966 aa8.78□□□□□ -1
SMCO3-201ENST00000316048 TSPYL2Q9H2G4 693 aaPredicted RBP8.78□□□□□ -1
SMCO3-201ENST00000316048 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
SMCO3-201ENST00000316048 PCDHB8Q9UN66 801 aa8.72□□□□□ -1.01
SMCO3-201ENST00000316048 PCDHB13Q9Y5F0 798 aa8.72□□□□□ -1.01
SMCO3-201ENST00000316048 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.01
SMCO3-201ENST00000316048 CADPS2Q86UW7 1296 aa8.69□□□□□ -1.02
SMCO3-201ENST00000316048 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
SMCO3-201ENST00000316048 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
SMCO3-201ENST00000316048 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
SMCO3-201ENST00000316048 PDAP1Q13442 181 aaKnown RBP8.65□□□□□ -1.03
SMCO3-201ENST00000316048 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.03
SMCO3-201ENST00000316048 MFRPQ9BY79 579 aa8.63□□□□□ -1.03
SMCO3-201ENST00000316048 PSEN1P49768 467 aa8.62□□□□□ -1.03
SMCO3-201ENST00000316048 KCNV2Q8TDN2 545 aa8.6□□□□□ -1.03
SMCO3-201ENST00000316048 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
SMCO3-201ENST00000316048 FXR2P51116 673 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMCO3-201ENST00000316048 PPP1R37O75864 691 aa8.59□□□□□ -1.03
SMCO3-201ENST00000316048 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
SMCO3-201ENST00000316048 MAP3K13O43283 966 aa8.57□□□□□ -1.04
SMCO3-201ENST00000316048 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
SMCO3-201ENST00000316048 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
SMCO3-201ENST00000316048 CABP2Q9NPB3 220 aa8.54□□□□□ -1.04
SMCO3-201ENST00000316048 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
SMCO3-201ENST00000316048 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
SMCO3-201ENST00000316048 FBXO22Q8NEZ5 403 aa8.53□□□□□ -1.04
SMCO3-201ENST00000316048 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
SMCO3-201ENST00000316048 WDR70Q9NW82 654 aa8.52□□□□□ -1.05
SMCO3-201ENST00000316048 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
SMCO3-201ENST00000316048 PAK3O75914 559 aaPredicted RBP8.5□□□□□ -1.05
SMCO3-201ENST00000316048 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
SMCO3-201ENST00000316048 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
SMCO3-201ENST00000316048 NLRP6P59044 892 aa8.46□□□□□ -1.06
SMCO3-201ENST00000316048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMCO3-201ENST00000316048 ZRANB1Q9UGI0 708 aa8.46□□□□□ -1.06
SMCO3-201ENST00000316048 MS4A4AQ96JQ5 239 aa8.45□□□□□ -1.06
SMCO3-201ENST00000316048 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
SMCO3-201ENST00000316048 NCKAP5LQ9HCH0 1330 aa8.45□□□□□ -1.06
SMCO3-201ENST00000316048 SOX12O15370 315 aa8.44□□□□□ -1.06
SMCO3-201ENST00000316048 CD44P16070 742 aaKnown RBP8.44□□□□□ -1.06
SMCO3-201ENST00000316048 SEMA3EO15041 775 aa8.41□□□□□ -1.06
SMCO3-201ENST00000316048 E2F4Q16254 413 aa8.41□□□□□ -1.06
SMCO3-201ENST00000316048 POTEHQ6S545 545 aa8.4□□□□□ -1.06
SMCO3-201ENST00000316048 ARHGEF1Q92888 912 aaKnown RBP8.39□□□□□ -1.07
SMCO3-201ENST00000316048 MS4A3Q96HJ5 214 aa8.38□□□□□ -1.07
SMCO3-201ENST00000316048 LARP6Q9BRS8 491 aaKnown RBP8.38□□□□□ -1.07
SMCO3-201ENST00000316048 TMEM106CQ9BVX2 250 aa8.38□□□□□ -1.07
SMCO3-201ENST00000316048 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
SMCO3-201ENST00000316048 TULP1O00294 542 aaPredicted RBP8.35□□□□□ -1.07
SMCO3-201ENST00000316048 CRISPLD2Q9H0B8 497 aa8.35□□□□□ -1.07
SMCO3-201ENST00000316048 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
SMCO3-201ENST00000316048 ZC3H15Q8WU90 426 aaKnown RBP8.33□□□□□ -1.08
SMCO3-201ENST00000316048 GOLGA2Q08379 1002 aa8.33□□□□□ -1.08
SMCO3-201ENST00000316048 MFSD10Q14728 455 aa8.33□□□□□ -1.08
SMCO3-201ENST00000316048 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
SMCO3-201ENST00000316048 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
SMCO3-201ENST00000316048 PDE4AP27815 886 aa8.3□□□□□ -1.08
SMCO3-201ENST00000316048 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
SMCO3-201ENST00000316048 MKRN3Q13064 507 aaKnown RBP8.29□□□□□ -1.08
SMCO3-201ENST00000316048 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
SMCO3-201ENST00000316048 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
SMCO3-201ENST00000316048 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
SMCO3-201ENST00000316048 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
SMCO3-201ENST00000316048 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
SMCO3-201ENST00000316048 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
SMCO3-201ENST00000316048 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
SMCO3-201ENST00000316048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMCO3-201ENST00000316048 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
SMCO3-201ENST00000316048 ILDR1Q86SU0 546 aaPredicted RBP8.24□□□□□ -1.09
SMCO3-201ENST00000316048 GALR2O43603 387 aaPredicted RBP8.24□□□□□ -1.09
SMCO3-201ENST00000316048 TIE1P35590 1138 aa8.23□□□□□ -1.09
SMCO3-201ENST00000316048 TRIM35Q9UPQ4 493 aa8.23□□□□□ -1.09
SMCO3-201ENST00000316048 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
SMCO3-201ENST00000316048 PPP1R15BQ5SWA1 713 aa8.23□□□□□ -1.09
SMCO3-201ENST00000316048 RBM26Q5T8P6 1007 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms