RNA–Protein interactions for RNA: ENST00000315073.9

TRIM41-201, Transcript of tripartite motif containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM41, Length 3,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-201ENST00000315073 NESP48681 1621 aa21.03■□□□□ 0.96
TRIM41-201ENST00000315073 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
TRIM41-201ENST00000315073 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
TRIM41-201ENST00000315073 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
TRIM41-201ENST00000315073 NEFLP07196 543 aa20.97■□□□□ 0.95
TRIM41-201ENST00000315073 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
TRIM41-201ENST00000315073 FKBP8Q14318 412 aa20.91■□□□□ 0.94
TRIM41-201ENST00000315073 ARHGAP35Q9NRY4 1499 aa20.91■□□□□ 0.94
TRIM41-201ENST00000315073 CCNB3Q8WWL7 1395 aa20.88■□□□□ 0.93
TRIM41-201ENST00000315073 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
TRIM41-201ENST00000315073 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
TRIM41-201ENST00000315073 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
TRIM41-201ENST00000315073 TOPBP1Q92547 1522 aa20.83■□□□□ 0.92
TRIM41-201ENST00000315073 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
TRIM41-201ENST00000315073 FHOD3Q2V2M9 1422 aa20.8■□□□□ 0.92
TRIM41-201ENST00000315073 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
TRIM41-201ENST00000315073 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
TRIM41-201ENST00000315073 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
TRIM41-201ENST00000315073 FBLN2P98095 1184 aa20.73■□□□□ 0.91
TRIM41-201ENST00000315073 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
TRIM41-201ENST00000315073 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
TRIM41-201ENST00000315073 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
TRIM41-201ENST00000315073 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
TRIM41-201ENST00000315073 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
TRIM41-201ENST00000315073 RRBP1Q9P2E9 1410 aaKnown RBP20.64■□□□□ 0.9
TRIM41-201ENST00000315073 RAB3GAP2Q9H2M9 1393 aa20.64■□□□□ 0.89
TRIM41-201ENST00000315073 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
TRIM41-201ENST00000315073 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
TRIM41-201ENST00000315073 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
TRIM41-201ENST00000315073 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
TRIM41-201ENST00000315073 FMN1Q68DA7 1419 aa20.59■□□□□ 0.89
TRIM41-201ENST00000315073 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
TRIM41-201ENST00000315073 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
TRIM41-201ENST00000315073 SETD5Q9C0A6 1442 aa20.56■□□□□ 0.88
TRIM41-201ENST00000315073 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.885e-7■■■■□ 25.2
TRIM41-201ENST00000315073 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
TRIM41-201ENST00000315073 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
TRIM41-201ENST00000315073 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
TRIM41-201ENST00000315073 KCNH8Q96L42 1107 aa20.54■□□□□ 0.88
TRIM41-201ENST00000315073 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
TRIM41-201ENST00000315073 ANO8Q9HCE9 1232 aaPredicted RBP20.51■□□□□ 0.87
TRIM41-201ENST00000315073 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
TRIM41-201ENST00000315073 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
TRIM41-201ENST00000315073 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
TRIM41-201ENST00000315073 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
TRIM41-201ENST00000315073 MSH5O43196 834 aa20.48■□□□□ 0.87
TRIM41-201ENST00000315073 PCF11O94913 1555 aaKnown RBP20.48■□□□□ 0.87
TRIM41-201ENST00000315073 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
TRIM41-201ENST00000315073 NBR1Q14596 966 aa20.47■□□□□ 0.87
TRIM41-201ENST00000315073 CUL7Q14999 1698 aa20.45■□□□□ 0.86
TRIM41-201ENST00000315073 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
TRIM41-201ENST00000315073 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
TRIM41-201ENST00000315073 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
TRIM41-201ENST00000315073 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
TRIM41-201ENST00000315073 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
TRIM41-201ENST00000315073 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
TRIM41-201ENST00000315073 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
TRIM41-201ENST00000315073 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
TRIM41-201ENST00000315073 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
TRIM41-201ENST00000315073 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
TRIM41-201ENST00000315073 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
TRIM41-201ENST00000315073 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
TRIM41-201ENST00000315073 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
TRIM41-201ENST00000315073 RTN4Q9NQC3 1192 aaKnown RBP20.31■□□□□ 0.84
TRIM41-201ENST00000315073 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
TRIM41-201ENST00000315073 NCOA2Q15596 1464 aa20.29■□□□□ 0.84
TRIM41-201ENST00000315073 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
TRIM41-201ENST00000315073 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
TRIM41-201ENST00000315073 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
TRIM41-201ENST00000315073 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
TRIM41-201ENST00000315073 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
TRIM41-201ENST00000315073 ANP32CO43423 234 aa20.23■□□□□ 0.83
TRIM41-201ENST00000315073 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
TRIM41-201ENST00000315073 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
TRIM41-201ENST00000315073 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
TRIM41-201ENST00000315073 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
TRIM41-201ENST00000315073 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
TRIM41-201ENST00000315073 CFDP1Q9UEE9 299 aaPredicted RBP20.21■□□□□ 0.83
TRIM41-201ENST00000315073 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
TRIM41-201ENST00000315073 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
TRIM41-201ENST00000315073 FOXD1Q16676 465 aa20.19■□□□□ 0.82
TRIM41-201ENST00000315073 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
TRIM41-201ENST00000315073 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
TRIM41-201ENST00000315073 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
TRIM41-201ENST00000315073 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
TRIM41-201ENST00000315073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.821e-10■■□□□ 14
TRIM41-201ENST00000315073 ZNF644Q9H582 1327 aaPredicted RBP20.15■□□□□ 0.82
TRIM41-201ENST00000315073 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
TRIM41-201ENST00000315073 MAPKBP1O60336 1514 aa20.14■□□□□ 0.82
TRIM41-201ENST00000315073 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.82
TRIM41-201ENST00000315073 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.82
TRIM41-201ENST00000315073 WDR97A6NE52 1622 aa20.14■□□□□ 0.82
TRIM41-201ENST00000315073 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.81
TRIM41-201ENST00000315073 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
TRIM41-201ENST00000315073 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
TRIM41-201ENST00000315073 EPRSP07814 1512 aaKnown RBP20.12■□□□□ 0.81
TRIM41-201ENST00000315073 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRIM41-201ENST00000315073 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
TRIM41-201ENST00000315073 EHBP1L1Q8N3D4 1523 aa20.11■□□□□ 0.81
TRIM41-201ENST00000315073 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms