RNA–Protein interactions for RNA: ENST00000314134.3

SLC35C1-201, Transcript of solute carrier family 35 member C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35C1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1-201ENST00000314134 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
SLC35C1-201ENST00000314134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
SLC35C1-201ENST00000314134 CUX2O14529 1486 aa20.48■□□□□ 0.87
SLC35C1-201ENST00000314134 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
SLC35C1-201ENST00000314134 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
SLC35C1-201ENST00000314134 MRS2Q9HD23 443 aa20.45■□□□□ 0.86
SLC35C1-201ENST00000314134 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
SLC35C1-201ENST00000314134 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
SLC35C1-201ENST00000314134 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
SLC35C1-201ENST00000314134 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
SLC35C1-201ENST00000314134 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
SLC35C1-201ENST00000314134 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
SLC35C1-201ENST00000314134 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
SLC35C1-201ENST00000314134 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
SLC35C1-201ENST00000314134 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
SLC35C1-201ENST00000314134 TMC1Q8TDI8 760 aa20.32■□□□□ 0.84
SLC35C1-201ENST00000314134 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
SLC35C1-201ENST00000314134 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
SLC35C1-201ENST00000314134 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
SLC35C1-201ENST00000314134 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
SLC35C1-201ENST00000314134 FOXD1Q16676 465 aa20.29■□□□□ 0.84
SLC35C1-201ENST00000314134 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
SLC35C1-201ENST00000314134 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
SLC35C1-201ENST00000314134 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
SLC35C1-201ENST00000314134 RAB3GAP2Q9H2M9 1393 aa20.26■□□□□ 0.83
SLC35C1-201ENST00000314134 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
SLC35C1-201ENST00000314134 NBR1Q14596 966 aa20.22■□□□□ 0.83
SLC35C1-201ENST00000314134 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
SLC35C1-201ENST00000314134 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
SLC35C1-201ENST00000314134 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
SLC35C1-201ENST00000314134 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
SLC35C1-201ENST00000314134 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
SLC35C1-201ENST00000314134 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
SLC35C1-201ENST00000314134 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
SLC35C1-201ENST00000314134 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
SLC35C1-201ENST00000314134 FHOD3Q2V2M9 1422 aa20.14■□□□□ 0.81
SLC35C1-201ENST00000314134 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
SLC35C1-201ENST00000314134 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
SLC35C1-201ENST00000314134 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
SLC35C1-201ENST00000314134 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
SLC35C1-201ENST00000314134 CARD11Q9BXL7 1154 aa20.07■□□□□ 0.8
SLC35C1-201ENST00000314134 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
SLC35C1-201ENST00000314134 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
SLC35C1-201ENST00000314134 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
SLC35C1-201ENST00000314134 DEKP35659 375 aaKnown RBP20.04■□□□□ 0.8
SLC35C1-201ENST00000314134 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
SLC35C1-201ENST00000314134 ERICH6BQ5W0A0 696 aa20.02■□□□□ 0.8
SLC35C1-201ENST00000314134 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
SLC35C1-201ENST00000314134 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
SLC35C1-201ENST00000314134 B4GALNT3Q6L9W6 998 aa20■□□□□ 0.79
SLC35C1-201ENST00000314134 EIF5BO60841 1220 aaKnown RBP19.99■□□□□ 0.79
SLC35C1-201ENST00000314134 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
SLC35C1-201ENST00000314134 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
SLC35C1-201ENST00000314134 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
SLC35C1-201ENST00000314134 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
SLC35C1-201ENST00000314134 IGF1RP08069 1367 aa19.94■□□□□ 0.78
SLC35C1-201ENST00000314134 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
SLC35C1-201ENST00000314134 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLC35C1-201ENST00000314134 PKD2Q13563 968 aa19.93■□□□□ 0.78
SLC35C1-201ENST00000314134 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
SLC35C1-201ENST00000314134 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
SLC35C1-201ENST00000314134 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
SLC35C1-201ENST00000314134 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
SLC35C1-201ENST00000314134 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
SLC35C1-201ENST00000314134 KIF21BO75037 1637 aa19.87■□□□□ 0.77
SLC35C1-201ENST00000314134 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
SLC35C1-201ENST00000314134 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
SLC35C1-201ENST00000314134 NEFMP07197 916 aa19.82■□□□□ 0.76
SLC35C1-201ENST00000314134 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
SLC35C1-201ENST00000314134 NEUROD2Q15784 382 aa19.82■□□□□ 0.76
SLC35C1-201ENST00000314134 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
SLC35C1-201ENST00000314134 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
SLC35C1-201ENST00000314134 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
SLC35C1-201ENST00000314134 TNNT2P45379 298 aaPredicted RBP19.8■□□□□ 0.76
SLC35C1-201ENST00000314134 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
SLC35C1-201ENST00000314134 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
SLC35C1-201ENST00000314134 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
SLC35C1-201ENST00000314134 DDRGK1Q96HY6 314 aa19.76■□□□□ 0.75
SLC35C1-201ENST00000314134 HNRNPMP52272 730 aaKnown RBP eCLIP19.75■□□□□ 0.75
SLC35C1-201ENST00000314134 GLIPR1L2Q4G1C9 344 aa19.75■□□□□ 0.75
SLC35C1-201ENST00000314134 NUP155O75694 1391 aa19.74■□□□□ 0.75
SLC35C1-201ENST00000314134 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
SLC35C1-201ENST00000314134 ESF1Q9H501 851 aaKnown RBP19.72■□□□□ 0.75
SLC35C1-201ENST00000314134 ARXQ96QS3 562 aa19.71■□□□□ 0.75
SLC35C1-201ENST00000314134 RTN4Q9NQC3 1192 aaKnown RBP19.7■□□□□ 0.74
SLC35C1-201ENST00000314134 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.69■□□□□ 0.74
SLC35C1-201ENST00000314134 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
SLC35C1-201ENST00000314134 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
SLC35C1-201ENST00000314134 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
SLC35C1-201ENST00000314134 IPO9Q96P70 1041 aaKnown RBP19.65■□□□□ 0.74
SLC35C1-201ENST00000314134 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
SLC35C1-201ENST00000314134 RGS3P49796 1198 aa19.65■□□□□ 0.74
SLC35C1-201ENST00000314134 SAFB2Q14151 953 aaKnown RBP eCLIP19.62■□□□□ 0.73
SLC35C1-201ENST00000314134 CCDC18Q5T9S5 1454 aa19.62■□□□□ 0.73
SLC35C1-201ENST00000314134 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
SLC35C1-201ENST00000314134 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
SLC35C1-201ENST00000314134 LRRC9Q6ZRR7 1453 aa19.59■□□□□ 0.73
SLC35C1-201ENST00000314134 NESP48681 1621 aa19.59■□□□□ 0.73
SLC35C1-201ENST00000314134 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
SLC35C1-201ENST00000314134 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms