RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 BRPF3Q9ULD4 1205 aa14.62□□□□□ -0.07
GGA2-201ENST00000309859 IPO9Q96P70 1041 aaKnown RBP14.6□□□□□ -0.07
GGA2-201ENST00000309859 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.07
GGA2-201ENST00000309859 TONSLQ96HA7 1378 aa14.58□□□□□ -0.07
GGA2-201ENST00000309859 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
GGA2-201ENST00000309859 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
GGA2-201ENST00000309859 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
GGA2-201ENST00000309859 A0A0U1RQG5 324 aaPredicted RBP14.56□□□□□ -0.08
GGA2-201ENST00000309859 UBE2Q2Q8WVN8 375 aa14.47□□□□□ -0.09
GGA2-201ENST00000309859 HSP90AA1P07900 732 aaKnown RBP14.46□□□□□ -0.09
GGA2-201ENST00000309859 DDRGK1Q96HY6 314 aa14.46□□□□□ -0.09
GGA2-201ENST00000309859 PODXL2Q9NZ53 605 aa14.46□□□□□ -0.1
GGA2-201ENST00000309859 CLIP1P30622 1438 aa14.46□□□□□ -0.1
GGA2-201ENST00000309859 TMC1Q8TDI8 760 aa14.45□□□□□ -0.1
GGA2-201ENST00000309859 SPRYD3Q8NCJ5 442 aa14.44□□□□□ -0.1
GGA2-201ENST00000309859 RGS3P49796 1198 aa14.44□□□□□ -0.1
GGA2-201ENST00000309859 GZF1Q9H116 711 aaPredicted RBP14.44□□□□□ -0.1
GGA2-201ENST00000309859 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
GGA2-201ENST00000309859 HSP90AA2PQ14568 343 aaPredicted RBP14.43□□□□□ -0.1
GGA2-201ENST00000309859 CANXP27824 592 aaKnown RBP14.42□□□□□ -0.1
GGA2-201ENST00000309859 GSE1Q14687 1217 aa14.42□□□□□ -0.1
GGA2-201ENST00000309859 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
GGA2-201ENST00000309859 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
GGA2-201ENST00000309859 TRIM44Q96DX7 344 aaPredicted RBP14.4□□□□□ -0.1
GGA2-201ENST00000309859 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
GGA2-201ENST00000309859 PNNQ9H307 717 aaKnown RBP14.38□□□□□ -0.11
GGA2-201ENST00000309859 SOGA1O94964 1423 aa14.36□□□□□ -0.11
GGA2-201ENST00000309859 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
GGA2-201ENST00000309859 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
GGA2-201ENST00000309859 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
GGA2-201ENST00000309859 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
GGA2-201ENST00000309859 FRAT1Q92837 279 aaPredicted RBP14.35□□□□□ -0.11
GGA2-201ENST00000309859 ANP32BQ92688 251 aaKnown RBP14.35□□□□□ -0.11
GGA2-201ENST00000309859 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
GGA2-201ENST00000309859 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
GGA2-201ENST00000309859 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
GGA2-201ENST00000309859 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
GGA2-201ENST00000309859 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
GGA2-201ENST00000309859 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.121e-15■■■■■ 40.5
GGA2-201ENST00000309859 PDE4AP27815 886 aa14.28□□□□□ -0.12
GGA2-201ENST00000309859 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
GGA2-201ENST00000309859 PLEKHG5O94827 1062 aa14.27□□□□□ -0.12
GGA2-201ENST00000309859 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
GGA2-201ENST00000309859 NFKBIBQ15653 356 aa14.26□□□□□ -0.13
GGA2-201ENST00000309859 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
GGA2-201ENST00000309859 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
GGA2-201ENST00000309859 HSPA5P11021 654 aaKnown RBP14.23□□□□□ -0.13
GGA2-201ENST00000309859 BECN1Q14457 450 aa14.22□□□□□ -0.13
GGA2-201ENST00000309859 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
GGA2-201ENST00000309859 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
GGA2-201ENST00000309859 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
GGA2-201ENST00000309859 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
GGA2-201ENST00000309859 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
GGA2-201ENST00000309859 PLIN1O60240 522 aa14.19□□□□□ -0.14
GGA2-201ENST00000309859 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
GGA2-201ENST00000309859 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
GGA2-201ENST00000309859 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
GGA2-201ENST00000309859 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
GGA2-201ENST00000309859 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
GGA2-201ENST00000309859 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
GGA2-201ENST00000309859 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
GGA2-201ENST00000309859 DNTTIP2Q5QJE6 756 aaKnown RBP14.16□□□□□ -0.14
GGA2-201ENST00000309859 KDM2AQ9Y2K7 1162 aa14.16□□□□□ -0.14
GGA2-201ENST00000309859 CCNB3Q8WWL7 1395 aa14.16□□□□□ -0.14
GGA2-201ENST00000309859 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
GGA2-201ENST00000309859 CCDC184Q52MB2 194 aa14.15□□□□□ -0.14
GGA2-201ENST00000309859 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
GGA2-201ENST00000309859 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
GGA2-201ENST00000309859 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.151e-7■■■■■ 66.8
GGA2-201ENST00000309859 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■□□□□ 9.8
GGA2-201ENST00000309859 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
GGA2-201ENST00000309859 FOXD1Q16676 465 aa14.11□□□□□ -0.15
GGA2-201ENST00000309859 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
GGA2-201ENST00000309859 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
GGA2-201ENST00000309859 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
GGA2-201ENST00000309859 FAM13BQ9NYF5 915 aa14.1□□□□□ -0.15
GGA2-201ENST00000309859 CDK11BP21127 795 aaKnown RBP14.09□□□□□ -0.15
GGA2-201ENST00000309859 RBM10P98175 930 aaKnown RBP14.09□□□□□ -0.15
GGA2-201ENST00000309859 VPS8Q8N3P4 1428 aa14.08□□□□□ -0.16
GGA2-201ENST00000309859 MSNP26038 577 aaKnown RBP14.08□□□□□ -0.16
GGA2-201ENST00000309859 PTMAP06454 111 aaKnown RBP14.08□□□□□ -0.16
GGA2-201ENST00000309859 FAM43AQ8N2R8 423 aa14.08□□□□□ -0.16
GGA2-201ENST00000309859 EEA1Q15075 1411 aa14.06□□□□□ -0.16
GGA2-201ENST00000309859 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
GGA2-201ENST00000309859 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
GGA2-201ENST00000309859 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
GGA2-201ENST00000309859 ZBED9Q6R2W3 1325 aa14.03□□□□□ -0.16
GGA2-201ENST00000309859 MYH16Q9H6N6 1097 aa14.03□□□□□ -0.16
GGA2-201ENST00000309859 C11orf95C9JLR9 678 aaPredicted RBP14.03□□□□□ -0.16
GGA2-201ENST00000309859 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
GGA2-201ENST00000309859 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.17
GGA2-201ENST00000309859 CRBNQ96SW2 442 aa14.01□□□□□ -0.17
GGA2-201ENST00000309859 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
GGA2-201ENST00000309859 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
GGA2-201ENST00000309859 CEP164Q9UPV0 1460 aa14□□□□□ -0.17
GGA2-201ENST00000309859 PLCB2Q00722 1185 aa14□□□□□ -0.17
GGA2-201ENST00000309859 POGKQ9P215 609 aa14□□□□□ -0.17
GGA2-201ENST00000309859 RRP1P56182 461 aaKnown RBP14□□□□□ -0.17
GGA2-201ENST00000309859 CECR2Q9BXF3 1484 aa14□□□□□ -0.17
GGA2-201ENST00000309859 NEUROD2Q15784 382 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms