RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 IGF1RP08069 1367 aa7.47□□□□□ -1.21
CAST-201ENST00000309190 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
CAST-201ENST00000309190 POLA1P09884 1462 aaPredicted RBP7.46□□□□□ -1.22
CAST-201ENST00000309190 TOP2BQ02880 1626 aa7.46□□□□□ -1.22
CAST-201ENST00000309190 SLC4A1APQ9BWU0 796 aaKnown RBP7.46□□□□□ -1.22
CAST-201ENST00000309190 OSCARQ8IYS5 282 aa7.45□□□□□ -1.22
CAST-201ENST00000309190 TOPBP1Q92547 1522 aa7.45□□□□□ -1.22
CAST-201ENST00000309190 HMGXB3Q12766 1538 aa7.44□□□□□ -1.22
CAST-201ENST00000309190 CLIP1P30622 1438 aa7.43□□□□□ -1.22
CAST-201ENST00000309190 EEA1Q15075 1411 aa7.43□□□□□ -1.22
CAST-201ENST00000309190 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
CAST-201ENST00000309190 FHOD3Q2V2M9 1422 aa7.43□□□□□ -1.22
CAST-201ENST00000309190 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
CAST-201ENST00000309190 NPM1P06748 294 aaKnown RBP eCLIP7.42□□□□□ -1.22
CAST-201ENST00000309190 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
CAST-201ENST00000309190 GAPVD1Q14C86 1478 aa7.41□□□□□ -1.22
CAST-201ENST00000309190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.41□□□□□ -1.229e-7■■■□□ 17.1
CAST-201ENST00000309190 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
CAST-201ENST00000309190 MLECQ14165 292 aa7.41□□□□□ -1.22
CAST-201ENST00000309190 RRP7BPQ9NSQ0 103 aa7.41□□□□□ -1.22
CAST-201ENST00000309190 ADRA2BP18089 450 aa7.4□□□□□ -1.22
CAST-201ENST00000309190 TRIM52Q96A61 297 aa7.4□□□□□ -1.22
CAST-201ENST00000309190 ERICH3Q5RHP9 1530 aa7.4□□□□□ -1.23
CAST-201ENST00000309190 MRC2Q9UBG0 1479 aa7.39□□□□□ -1.23
CAST-201ENST00000309190 NCBP3Q53F19 620 aaKnown RBP7.38□□□□□ -1.23
CAST-201ENST00000309190 KIF21AQ7Z4S6 1674 aa7.37□□□□□ -1.23
CAST-201ENST00000309190 ZNF326Q5BKZ1 582 aaKnown RBP7.37□□□□□ -1.23
CAST-201ENST00000309190 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
CAST-201ENST00000309190 ZNF644Q9H582 1327 aaPredicted RBP7.36□□□□□ -1.23
CAST-201ENST00000309190 THOC2Q8NI27 1593 aaKnown RBP7.35□□□□□ -1.23
CAST-201ENST00000309190 POLR3GLQ9BT43 218 aa7.35□□□□□ -1.23
CAST-201ENST00000309190 GOLGA3Q08378 1498 aa7.35□□□□□ -1.23
CAST-201ENST00000309190 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
CAST-201ENST00000309190 FOXD1Q16676 465 aa7.34□□□□□ -1.23
CAST-201ENST00000309190 MTUS2Q5JR59 1369 aa7.34□□□□□ -1.23
CAST-201ENST00000309190 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
CAST-201ENST00000309190 PRXQ9BXM0 1461 aa7.34□□□□□ -1.23
CAST-201ENST00000309190 ARAP1Q96P48 1450 aa7.33□□□□□ -1.24
CAST-201ENST00000309190 CFAP43Q8NDM7 1665 aa7.32□□□□□ -1.24
CAST-201ENST00000309190 LRRIQ1Q96JM4 1722 aa7.32□□□□□ -1.24
CAST-201ENST00000309190 HNRNPMP52272 730 aaKnown RBP eCLIP7.32□□□□□ -1.24
CAST-201ENST00000309190 DAXXQ9UER7 740 aaPredicted RBP7.32□□□□□ -1.24
CAST-201ENST00000309190 LAMC3Q9Y6N6 1575 aa7.31□□□□□ -1.24
CAST-201ENST00000309190 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
CAST-201ENST00000309190 ARID4BQ4LE39 1312 aaPredicted RBP7.3□□□□□ -1.24
CAST-201ENST00000309190 WDR97A6NE52 1622 aa7.3□□□□□ -1.24
CAST-201ENST00000309190 CHGAP10645 457 aaKnown RBP7.3□□□□□ -1.24
CAST-201ENST00000309190 FAM69CQ0P6D2 419 aa7.3□□□□□ -1.24
CAST-201ENST00000309190 CFDP1Q9UEE9 299 aaPredicted RBP7.3□□□□□ -1.24
CAST-201ENST00000309190 PRG4Q92954 1404 aaPredicted RBP7.29□□□□□ -1.24
CAST-201ENST00000309190 VPS8Q8N3P4 1428 aa7.29□□□□□ -1.24
CAST-201ENST00000309190 MAP3K1Q13233 1512 aa7.28□□□□□ -1.24
CAST-201ENST00000309190 PTPRGP23470 1445 aa7.28□□□□□ -1.24
CAST-201ENST00000309190 RRBP1Q9P2E9 1410 aaKnown RBP7.27□□□□□ -1.24
CAST-201ENST00000309190 CDK11AQ9UQ88 783 aaPredicted RBP7.27□□□□□ -1.24
CAST-201ENST00000309190 GRIN2BQ13224 1484 aa7.27□□□□□ -1.25
CAST-201ENST00000309190 MAPKBP1O60336 1514 aa7.27□□□□□ -1.25
CAST-201ENST00000309190 PELP1Q8IZL8 1130 aaKnown RBP7.27□□□□□ -1.25
CAST-201ENST00000309190 DNMBPQ6XZF7 1577 aa7.27□□□□□ -1.25
CAST-201ENST00000309190 RAPGEF3O95398 923 aa7.27□□□□□ -1.25
CAST-201ENST00000309190 GGT6Q6P531 493 aa7.27□□□□□ -1.25
CAST-201ENST00000309190 NUTM2DQ5VT03 806 aaPredicted RBP7.26□□□□□ -1.25
CAST-201ENST00000309190 RGL3Q3MIN7 710 aa7.26□□□□□ -1.25
CAST-201ENST00000309190 AFAP1Q8N556 730 aa7.26□□□□□ -1.25
CAST-201ENST00000309190 ACIN1Q9UKV3 1341 aaKnown RBP7.26□□□□□ -1.25
CAST-201ENST00000309190 IFT140Q96RY7 1462 aa7.25□□□□□ -1.25
CAST-201ENST00000309190 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
CAST-201ENST00000309190 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 PLB1Q6P1J6 1458 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 SIN3AQ96ST3 1273 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 RIMBP3CA6NJZ7 1639 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 RIMBP3BA6NNM3 1639 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 RIMBP3Q9UFD9 1639 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 BCANQ96GW7 911 aa7.24□□□□□ -1.25
CAST-201ENST00000309190 KDM5BQ9UGL1 1544 aa7.23□□□□□ -1.25
CAST-201ENST00000309190 FHAD1B1AJZ9 1412 aa7.23□□□□□ -1.25
CAST-201ENST00000309190 ILDR1Q86SU0 546 aaPredicted RBP7.22□□□□□ -1.25
CAST-201ENST00000309190 TULP1O00294 542 aaPredicted RBP7.21□□□□□ -1.25
CAST-201ENST00000309190 TSPY4P0CV99 314 aa7.21□□□□□ -1.25
CAST-201ENST00000309190 TSPY10P0CW01 314 aa7.21□□□□□ -1.25
CAST-201ENST00000309190 ABCA10Q8WWZ4 1543 aa7.21□□□□□ -1.25
CAST-201ENST00000309190 TIMELESSQ9UNS1 1208 aa7.2□□□□□ -1.26
CAST-201ENST00000309190 ARHGAP35Q9NRY4 1499 aa7.2□□□□□ -1.26
CAST-201ENST00000309190 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
CAST-201ENST00000309190 TPRNQ4KMQ1 711 aa7.19□□□□□ -1.26
CAST-201ENST00000309190 TIAM1Q13009 1591 aa7.19□□□□□ -1.26
CAST-201ENST00000309190 GRIN2AQ12879 1464 aa7.19□□□□□ -1.26
CAST-201ENST00000309190 CDK13Q14004 1512 aaKnown RBP7.18□□□□□ -1.26
CAST-201ENST00000309190 CTTNBP2Q8WZ74 1663 aa7.18□□□□□ -1.26
CAST-201ENST00000309190 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
CAST-201ENST00000309190 POLR1AO95602 1720 aaPredicted RBP7.18□□□□□ -1.26
CAST-201ENST00000309190 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
CAST-201ENST00000309190 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
CAST-201ENST00000309190 ERCC6L2Q5T890 1561 aa7.17□□□□□ -1.26
CAST-201ENST00000309190 CCNB3Q8WWL7 1395 aa7.17□□□□□ -1.26
CAST-201ENST00000309190 YTHDC1Q96MU7 727 aaKnown RBP7.16□□□□□ -1.26
CAST-201ENST00000309190 ESF1Q9H501 851 aaKnown RBP7.16□□□□□ -1.26
CAST-201ENST00000309190 KIF3BO15066 747 aa7.16□□□□□ -1.26
CAST-201ENST00000309190 HAP1P54257 671 aaPredicted RBP7.15□□□□□ -1.26
CAST-201ENST00000309190 TAOK2Q9UL54 1235 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 855.8 ms