RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
RUNX3-201ENST00000308873 CUX2O14529 1486 aa20.78■□□□□ 0.92
RUNX3-201ENST00000308873 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
RUNX3-201ENST00000308873 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.92
RUNX3-201ENST00000308873 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
RUNX3-201ENST00000308873 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
RUNX3-201ENST00000308873 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
RUNX3-201ENST00000308873 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
RUNX3-201ENST00000308873 PHLDB1Q86UU1 1377 aa20.73■□□□□ 0.91
RUNX3-201ENST00000308873 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
RUNX3-201ENST00000308873 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
RUNX3-201ENST00000308873 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
RUNX3-201ENST00000308873 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
RUNX3-201ENST00000308873 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
RUNX3-201ENST00000308873 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
RUNX3-201ENST00000308873 CUX1P39880 1505 aa20.66■□□□□ 0.9
RUNX3-201ENST00000308873 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
RUNX3-201ENST00000308873 IGF1RP08069 1367 aa20.64■□□□□ 0.89
RUNX3-201ENST00000308873 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
RUNX3-201ENST00000308873 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
RUNX3-201ENST00000308873 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
RUNX3-201ENST00000308873 BCL11AQ9H165 835 aa20.59■□□□□ 0.89
RUNX3-201ENST00000308873 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.89
RUNX3-201ENST00000308873 MAPKBP1O60336 1514 aa20.57■□□□□ 0.88
RUNX3-201ENST00000308873 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
RUNX3-201ENST00000308873 FOXD1Q16676 465 aa20.55■□□□□ 0.88
RUNX3-201ENST00000308873 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
RUNX3-201ENST00000308873 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
RUNX3-201ENST00000308873 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
RUNX3-201ENST00000308873 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
RUNX3-201ENST00000308873 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
RUNX3-201ENST00000308873 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
RUNX3-201ENST00000308873 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
RUNX3-201ENST00000308873 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
RUNX3-201ENST00000308873 BIVM-ERCC5R4GMW8 1640 aa20.43■□□□□ 0.86
RUNX3-201ENST00000308873 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
RUNX3-201ENST00000308873 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
RUNX3-201ENST00000308873 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
RUNX3-201ENST00000308873 MSH5O43196 834 aa20.41■□□□□ 0.86
RUNX3-201ENST00000308873 CFTRP13569 1480 aa20.39■□□□□ 0.86
RUNX3-201ENST00000308873 NBR1Q14596 966 aa20.38■□□□□ 0.85
RUNX3-201ENST00000308873 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
RUNX3-201ENST00000308873 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
RUNX3-201ENST00000308873 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
RUNX3-201ENST00000308873 CCDC18Q5T9S5 1454 aa20.34■□□□□ 0.85
RUNX3-201ENST00000308873 WASHC2AQ641Q2 1341 aa20.34■□□□□ 0.85
RUNX3-201ENST00000308873 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
RUNX3-201ENST00000308873 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
RUNX3-201ENST00000308873 L3MBTL2Q969R5 705 aa20.31■□□□□ 0.84
RUNX3-201ENST00000308873 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
RUNX3-201ENST00000308873 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
RUNX3-201ENST00000308873 PCF11O94913 1555 aaKnown RBP20.28■□□□□ 0.84
RUNX3-201ENST00000308873 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
RUNX3-201ENST00000308873 SLC4A1APQ9BWU0 796 aaKnown RBP20.25■□□□□ 0.83
RUNX3-201ENST00000308873 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
RUNX3-201ENST00000308873 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
RUNX3-201ENST00000308873 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
RUNX3-201ENST00000308873 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
RUNX3-201ENST00000308873 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
RUNX3-201ENST00000308873 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
RUNX3-201ENST00000308873 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
RUNX3-201ENST00000308873 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
RUNX3-201ENST00000308873 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
RUNX3-201ENST00000308873 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
RUNX3-201ENST00000308873 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
RUNX3-201ENST00000308873 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
RUNX3-201ENST00000308873 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
RUNX3-201ENST00000308873 NAIPQ13075 1403 aa20.14■□□□□ 0.81
RUNX3-201ENST00000308873 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
RUNX3-201ENST00000308873 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
RUNX3-201ENST00000308873 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
RUNX3-201ENST00000308873 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
RUNX3-201ENST00000308873 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
RUNX3-201ENST00000308873 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
RUNX3-201ENST00000308873 FANCIQ9NVI1 1328 aa20.11■□□□□ 0.81
RUNX3-201ENST00000308873 NESP48681 1621 aa20.1■□□□□ 0.81
RUNX3-201ENST00000308873 DEKP35659 375 aaKnown RBP20.09■□□□□ 0.81
RUNX3-201ENST00000308873 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
RUNX3-201ENST00000308873 MYOM3Q5VTT5 1437 aa20.09■□□□□ 0.81
RUNX3-201ENST00000308873 ANP32AP39687 249 aaKnown RBP20.07■□□□□ 0.8
RUNX3-201ENST00000308873 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
RUNX3-201ENST00000308873 FBLN2P98095 1184 aa20.06■□□□□ 0.8
RUNX3-201ENST00000308873 NOP58Q9Y2X3 529 aaKnown RBP20.06■□□□□ 0.8
RUNX3-201ENST00000308873 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
RUNX3-201ENST00000308873 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
RUNX3-201ENST00000308873 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
RUNX3-201ENST00000308873 PAK3O75914 559 aaPredicted RBP20.03■□□□□ 0.8
RUNX3-201ENST00000308873 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
RUNX3-201ENST00000308873 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
RUNX3-201ENST00000308873 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
RUNX3-201ENST00000308873 ZBTB47Q9UFB7 747 aaPredicted RBP20■□□□□ 0.79
RUNX3-201ENST00000308873 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
RUNX3-201ENST00000308873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
RUNX3-201ENST00000308873 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
RUNX3-201ENST00000308873 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
RUNX3-201ENST00000308873 CARD11Q9BXL7 1154 aa19.95■□□□□ 0.78
RUNX3-201ENST00000308873 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
RUNX3-201ENST00000308873 PKD2Q13563 968 aa19.94■□□□□ 0.78
RUNX3-201ENST00000308873 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
RUNX3-201ENST00000308873 LAS1LQ9Y4W2 734 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms