RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 PLCB2Q00722 1185 aa20.95■□□□□ 0.94
PPM1E-201ENST00000308249 TONSLQ96HA7 1378 aa20.93■□□□□ 0.94
PPM1E-201ENST00000308249 BECN1Q14457 450 aa20.92■□□□□ 0.94
PPM1E-201ENST00000308249 NAP1L5Q96NT1 182 aaPredicted RBP20.89■□□□□ 0.94
PPM1E-201ENST00000308249 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
PPM1E-201ENST00000308249 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
PPM1E-201ENST00000308249 CLSTN1O94985 981 aa20.88■□□□□ 0.93
PPM1E-201ENST00000308249 RTN4Q9NQC3 1192 aaKnown RBP20.86■□□□□ 0.93
PPM1E-201ENST00000308249 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
PPM1E-201ENST00000308249 MRS2Q9HD23 443 aa20.84■□□□□ 0.93
PPM1E-201ENST00000308249 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
PPM1E-201ENST00000308249 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
PPM1E-201ENST00000308249 NPHP1O15259 732 aa20.8■□□□□ 0.92
PPM1E-201ENST00000308249 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
PPM1E-201ENST00000308249 ANP32EQ9BTT0 268 aa20.78■□□□□ 0.92
PPM1E-201ENST00000308249 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
PPM1E-201ENST00000308249 NAP1L2Q9ULW6 460 aaPredicted RBP20.75■□□□□ 0.91
PPM1E-201ENST00000308249 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
PPM1E-201ENST00000308249 GOLGA6L6A8MZA4 724 aa20.7■□□□□ 0.9
PPM1E-201ENST00000308249 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
PPM1E-201ENST00000308249 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
PPM1E-201ENST00000308249 FGD1P98174 961 aa20.68■□□□□ 0.9
PPM1E-201ENST00000308249 PRM3Q9NNZ6 103 aa20.67■□□□□ 0.9
PPM1E-201ENST00000308249 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
PPM1E-201ENST00000308249 PPP1R15AO75807 674 aaPredicted RBP20.66■□□□□ 0.9
PPM1E-201ENST00000308249 ERICH6BQ5W0A0 696 aa20.65■□□□□ 0.9
PPM1E-201ENST00000308249 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
PPM1E-201ENST00000308249 ISY1Q9ULR0 285 aaKnown RBP20.61■□□□□ 0.89
PPM1E-201ENST00000308249 ARID4BQ4LE39 1312 aaPredicted RBP20.61■□□□□ 0.89
PPM1E-201ENST00000308249 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
PPM1E-201ENST00000308249 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.89
PPM1E-201ENST00000308249 NRDCO43847 1150 aa20.58■□□□□ 0.89
PPM1E-201ENST00000308249 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
PPM1E-201ENST00000308249 KCNJ4P48050 445 aa20.58■□□□□ 0.88
PPM1E-201ENST00000308249 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
PPM1E-201ENST00000308249 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
PPM1E-201ENST00000308249 DRC7Q8IY82 874 aa20.53■□□□□ 0.88
PPM1E-201ENST00000308249 GOLGA6L4A6NEF3 574 aa20.53■□□□□ 0.88
PPM1E-201ENST00000308249 PDE4CQ08493 712 aa20.53■□□□□ 0.88
PPM1E-201ENST00000308249 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
PPM1E-201ENST00000308249 RGS3P49796 1198 aa20.52■□□□□ 0.88
PPM1E-201ENST00000308249 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
PPM1E-201ENST00000308249 ARID3AQ99856 593 aa20.51■□□□□ 0.87
PPM1E-201ENST00000308249 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
PPM1E-201ENST00000308249 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
PPM1E-201ENST00000308249 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
PPM1E-201ENST00000308249 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
PPM1E-201ENST00000308249 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
PPM1E-201ENST00000308249 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
PPM1E-201ENST00000308249 MSNP26038 577 aaKnown RBP20.42■□□□□ 0.86
PPM1E-201ENST00000308249 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
PPM1E-201ENST00000308249 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
PPM1E-201ENST00000308249 KIAA2012Q0VF49 1180 aa20.4■□□□□ 0.86
PPM1E-201ENST00000308249 MIER1Q8N108 512 aa20.39■□□□□ 0.86
PPM1E-201ENST00000308249 L1TD1Q5T7N2 865 aaKnown RBP20.39■□□□□ 0.86
PPM1E-201ENST00000308249 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
PPM1E-201ENST00000308249 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
PPM1E-201ENST00000308249 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
PPM1E-201ENST00000308249 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
PPM1E-201ENST00000308249 SUPT16HQ9Y5B9 1047 aaKnown RBP20.34■□□□□ 0.85
PPM1E-201ENST00000308249 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.85
PPM1E-201ENST00000308249 A0A0U1RQG5 324 aaPredicted RBP20.33■□□□□ 0.85
PPM1E-201ENST00000308249 TNNT3P45378 269 aaPredicted RBP20.33■□□□□ 0.85
PPM1E-201ENST00000308249 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
PPM1E-201ENST00000308249 HSCBQ8IWL3 235 aa20.29■□□□□ 0.84
PPM1E-201ENST00000308249 FBXO3Q9UK99 471 aa20.29■□□□□ 0.84
PPM1E-201ENST00000308249 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
PPM1E-201ENST00000308249 NOP58Q9Y2X3 529 aaKnown RBP20.28■□□□□ 0.84
PPM1E-201ENST00000308249 U2SURPO15042 1029 aaKnown RBP20.27■□□□□ 0.83
PPM1E-201ENST00000308249 SOX12O15370 315 aa20.26■□□□□ 0.83
PPM1E-201ENST00000308249 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
PPM1E-201ENST00000308249 APBB1O00213 710 aa20.21■□□□□ 0.83
PPM1E-201ENST00000308249 MCCP23508 829 aa20.21■□□□□ 0.83
PPM1E-201ENST00000308249 POGKQ9P215 609 aa20.21■□□□□ 0.83
PPM1E-201ENST00000308249 CREBRFQ8IUR6 639 aa20.18■□□□□ 0.82
PPM1E-201ENST00000308249 ABCC9O60706 1549 aa20.17■□□□□ 0.82
PPM1E-201ENST00000308249 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
PPM1E-201ENST00000308249 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
PPM1E-201ENST00000308249 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
PPM1E-201ENST00000308249 GZF1Q9H116 711 aaPredicted RBP20.14■□□□□ 0.82
PPM1E-201ENST00000308249 GOLGA6L1Q8N7Z2 621 aa20.14■□□□□ 0.81
PPM1E-201ENST00000308249 CDCA8Q53HL2 280 aa20.14■□□□□ 0.81
PPM1E-201ENST00000308249 HSP90B1P14625 803 aaKnown RBP20.13■□□□□ 0.81
PPM1E-201ENST00000308249 WWC1Q8IX03 1113 aa20.13■□□□□ 0.81
PPM1E-201ENST00000308249 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
PPM1E-201ENST00000308249 B4GALNT3Q6L9W6 998 aa20.11■□□□□ 0.81
PPM1E-201ENST00000308249 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
PPM1E-201ENST00000308249 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
PPM1E-201ENST00000308249 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
PPM1E-201ENST00000308249 KIAA1211Q6ZU35 1233 aa20.09■□□□□ 0.81
PPM1E-201ENST00000308249 MS4A1P11836 297 aa20.08■□□□□ 0.81
PPM1E-201ENST00000308249 DEKP35659 375 aaKnown RBP20.08■□□□□ 0.81
PPM1E-201ENST00000308249 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.81
PPM1E-201ENST00000308249 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
PPM1E-201ENST00000308249 RASSF8Q8NHQ8 419 aa20.07■□□□□ 0.8
PPM1E-201ENST00000308249 CEP89Q96ST8 783 aa20.06■□□□□ 0.8
PPM1E-201ENST00000308249 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
PPM1E-201ENST00000308249 TPM4P67936 248 aa20.03■□□□□ 0.8
PPM1E-201ENST00000308249 VPS53Q5VIR6 699 aa20.02■□□□□ 0.8
PPM1E-201ENST00000308249 TMX4Q9H1E5 349 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 300.8 ms