RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 TIAM1Q13009 1591 aa24.31■■□□□ 1.48
SYVN1-202ENST00000307289 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
SYVN1-202ENST00000307289 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
SYVN1-202ENST00000307289 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
SYVN1-202ENST00000307289 PCF11O94913 1555 aaKnown RBP24.26■■□□□ 1.47
SYVN1-202ENST00000307289 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
SYVN1-202ENST00000307289 MIER1Q8N108 512 aa24.24■■□□□ 1.47
SYVN1-202ENST00000307289 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
SYVN1-202ENST00000307289 YTHDC1Q96MU7 727 aaKnown RBP24.2■■□□□ 1.47
SYVN1-202ENST00000307289 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
SYVN1-202ENST00000307289 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
SYVN1-202ENST00000307289 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
SYVN1-202ENST00000307289 RAB3GAP2Q9H2M9 1393 aa24.17■■□□□ 1.46
SYVN1-202ENST00000307289 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
SYVN1-202ENST00000307289 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
SYVN1-202ENST00000307289 MAP3K1Q13233 1512 aa24.14■■□□□ 1.46
SYVN1-202ENST00000307289 CUL7Q14999 1698 aa24.13■■□□□ 1.45
SYVN1-202ENST00000307289 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
SYVN1-202ENST00000307289 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
SYVN1-202ENST00000307289 CTTNBP2Q8WZ74 1663 aa24.09■■□□□ 1.45
SYVN1-202ENST00000307289 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
SYVN1-202ENST00000307289 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
SYVN1-202ENST00000307289 AQRO60306 1485 aaKnown RBP eCLIP24.05■■□□□ 1.442e-7■■■■□ 19.3
SYVN1-202ENST00000307289 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
SYVN1-202ENST00000307289 EFCAB5A4FU69 1503 aa24.04■■□□□ 1.44
SYVN1-202ENST00000307289 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
SYVN1-202ENST00000307289 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
SYVN1-202ENST00000307289 SIN3AQ96ST3 1273 aa24.02■■□□□ 1.43
SYVN1-202ENST00000307289 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
SYVN1-202ENST00000307289 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
SYVN1-202ENST00000307289 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
SYVN1-202ENST00000307289 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
SYVN1-202ENST00000307289 ARID3CA6NKF2 412 aa23.98■■□□□ 1.43
SYVN1-202ENST00000307289 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
SYVN1-202ENST00000307289 MTUS2Q5JR59 1369 aa23.94■■□□□ 1.42
SYVN1-202ENST00000307289 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
SYVN1-202ENST00000307289 SAMD9Q5K651 1589 aa23.92■■□□□ 1.42
SYVN1-202ENST00000307289 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
SYVN1-202ENST00000307289 PTPRKQ15262 1439 aa23.88■■□□□ 1.41
SYVN1-202ENST00000307289 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
SYVN1-202ENST00000307289 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
SYVN1-202ENST00000307289 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
SYVN1-202ENST00000307289 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
SYVN1-202ENST00000307289 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
SYVN1-202ENST00000307289 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
SYVN1-202ENST00000307289 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
SYVN1-202ENST00000307289 CHIC2Q9UKJ5 165 aa23.76■■□□□ 1.39
SYVN1-202ENST00000307289 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
SYVN1-202ENST00000307289 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
SYVN1-202ENST00000307289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
SYVN1-202ENST00000307289 IQGAP2Q13576 1575 aa23.72■■□□□ 1.39
SYVN1-202ENST00000307289 CDK13Q14004 1512 aaKnown RBP23.72■■□□□ 1.39
SYVN1-202ENST00000307289 RRP7BPQ9NSQ0 103 aa23.71■■□□□ 1.39
SYVN1-202ENST00000307289 KCNH8Q96L42 1107 aa23.69■■□□□ 1.38
SYVN1-202ENST00000307289 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
SYVN1-202ENST00000307289 SUPT6HQ7KZ85 1726 aaKnown RBP23.65■■□□□ 1.38
SYVN1-202ENST00000307289 EPRSP07814 1512 aaKnown RBP23.65■■□□□ 1.38
SYVN1-202ENST00000307289 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
SYVN1-202ENST00000307289 NAIPQ13075 1403 aa23.64■■□□□ 1.38
SYVN1-202ENST00000307289 IFT140Q96RY7 1462 aa23.64■■□□□ 1.37
SYVN1-202ENST00000307289 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
SYVN1-202ENST00000307289 HFM1A2PYH4 1435 aa23.64■■□□□ 1.37
SYVN1-202ENST00000307289 FBLN2P98095 1184 aa23.63■■□□□ 1.37
SYVN1-202ENST00000307289 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SYVN1-202ENST00000307289 WDR62O43379 1518 aa23.62■■□□□ 1.37
SYVN1-202ENST00000307289 PTPN23Q9H3S7 1636 aa23.61■■□□□ 1.37
SYVN1-202ENST00000307289 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
SYVN1-202ENST00000307289 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
SYVN1-202ENST00000307289 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
SYVN1-202ENST00000307289 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
SYVN1-202ENST00000307289 HECW1Q76N89 1606 aa23.57■■□□□ 1.36
SYVN1-202ENST00000307289 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
SYVN1-202ENST00000307289 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
SYVN1-202ENST00000307289 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
SYVN1-202ENST00000307289 UACAQ9BZF9 1416 aa23.55■■□□□ 1.36
SYVN1-202ENST00000307289 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
SYVN1-202ENST00000307289 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
SYVN1-202ENST00000307289 TRIM52Q96A61 297 aa23.52■■□□□ 1.36
SYVN1-202ENST00000307289 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
SYVN1-202ENST00000307289 KDM6BO15054 1643 aa23.51■■□□□ 1.35
SYVN1-202ENST00000307289 FOXD1Q16676 465 aa23.51■■□□□ 1.35
SYVN1-202ENST00000307289 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
SYVN1-202ENST00000307289 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
SYVN1-202ENST00000307289 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
SYVN1-202ENST00000307289 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
SYVN1-202ENST00000307289 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.35
SYVN1-202ENST00000307289 DENND4BO75064 1496 aaPredicted RBP23.45■■□□□ 1.34
SYVN1-202ENST00000307289 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
SYVN1-202ENST00000307289 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
SYVN1-202ENST00000307289 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
SYVN1-202ENST00000307289 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
SYVN1-202ENST00000307289 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
SYVN1-202ENST00000307289 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
SYVN1-202ENST00000307289 KDM5BQ9UGL1 1544 aa23.35■■□□□ 1.33
SYVN1-202ENST00000307289 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
SYVN1-202ENST00000307289 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
SYVN1-202ENST00000307289 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
SYVN1-202ENST00000307289 ABCC5O15440 1437 aa23.32■■□□□ 1.32
SYVN1-202ENST00000307289 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
SYVN1-202ENST00000307289 DAPK1P53355 1430 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms