RNA–Protein interactions for RNA: ENST00000303045.10

COL22A1-201, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL22A1, Length 6,346 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-201ENST00000303045 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
COL22A1-201ENST00000303045 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
COL22A1-201ENST00000303045 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
COL22A1-201ENST00000303045 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
COL22A1-201ENST00000303045 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
COL22A1-201ENST00000303045 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
COL22A1-201ENST00000303045 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
COL22A1-201ENST00000303045 TRIM44Q96DX7 344 aaPredicted RBP18.4■□□□□ 0.54
COL22A1-201ENST00000303045 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
COL22A1-201ENST00000303045 ZRSR1Q15695 479 aaKnown RBP18.39■□□□□ 0.53
COL22A1-201ENST00000303045 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
COL22A1-201ENST00000303045 NPHP1O15259 732 aa18.37■□□□□ 0.53
COL22A1-201ENST00000303045 BECN1Q14457 450 aa18.36■□□□□ 0.53
COL22A1-201ENST00000303045 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
COL22A1-201ENST00000303045 PTMAP06454 111 aaKnown RBP18.35■□□□□ 0.53
COL22A1-201ENST00000303045 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
COL22A1-201ENST00000303045 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
COL22A1-201ENST00000303045 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
COL22A1-201ENST00000303045 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
COL22A1-201ENST00000303045 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
COL22A1-201ENST00000303045 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
COL22A1-201ENST00000303045 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
COL22A1-201ENST00000303045 DNTTIP2Q5QJE6 756 aaKnown RBP18.3■□□□□ 0.52
COL22A1-201ENST00000303045 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
COL22A1-201ENST00000303045 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
COL22A1-201ENST00000303045 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
COL22A1-201ENST00000303045 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.51
COL22A1-201ENST00000303045 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
COL22A1-201ENST00000303045 PLCB2Q00722 1185 aa18.25■□□□□ 0.51
COL22A1-201ENST00000303045 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
COL22A1-201ENST00000303045 MIER1Q8N108 512 aa18.23■□□□□ 0.51
COL22A1-201ENST00000303045 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
COL22A1-201ENST00000303045 TNNT2P45379 298 aaPredicted RBP18.2■□□□□ 0.5
COL22A1-201ENST00000303045 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
COL22A1-201ENST00000303045 CLSTN1O94985 981 aa18.19■□□□□ 0.5
COL22A1-201ENST00000303045 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
COL22A1-201ENST00000303045 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
COL22A1-201ENST00000303045 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
COL22A1-201ENST00000303045 FGD1P98174 961 aa18.16■□□□□ 0.5
COL22A1-201ENST00000303045 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
COL22A1-201ENST00000303045 GOLGA2Q08379 1002 aa18.14■□□□□ 0.5
COL22A1-201ENST00000303045 ANP32EQ9BTT0 268 aa18.14■□□□□ 0.49
COL22A1-201ENST00000303045 POGKQ9P215 609 aa18.12■□□□□ 0.49
COL22A1-201ENST00000303045 RGS3P49796 1198 aa18.12■□□□□ 0.49
COL22A1-201ENST00000303045 KCNJ4P48050 445 aa18.11■□□□□ 0.49
COL22A1-201ENST00000303045 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
COL22A1-201ENST00000303045 SOX12O15370 315 aa18.1■□□□□ 0.49
COL22A1-201ENST00000303045 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
COL22A1-201ENST00000303045 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
COL22A1-201ENST00000303045 RTN4Q9NQC3 1192 aaKnown RBP18.09■□□□□ 0.49
COL22A1-201ENST00000303045 U2SURPO15042 1029 aaKnown RBP18.07■□□□□ 0.48
COL22A1-201ENST00000303045 HSP90AB1P08238 724 aaKnown RBP18.07■□□□□ 0.48
COL22A1-201ENST00000303045 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
COL22A1-201ENST00000303045 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
COL22A1-201ENST00000303045 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
COL22A1-201ENST00000303045 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
COL22A1-201ENST00000303045 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
COL22A1-201ENST00000303045 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
COL22A1-201ENST00000303045 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
COL22A1-201ENST00000303045 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
COL22A1-201ENST00000303045 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
COL22A1-201ENST00000303045 MLECQ14165 292 aa17.97■□□□□ 0.47
COL22A1-201ENST00000303045 CLIP1P30622 1438 aa17.96■□□□□ 0.47
COL22A1-201ENST00000303045 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
COL22A1-201ENST00000303045 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
COL22A1-201ENST00000303045 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
COL22A1-201ENST00000303045 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
COL22A1-201ENST00000303045 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL22A1-201ENST00000303045 DRC7Q8IY82 874 aa17.92■□□□□ 0.46
COL22A1-201ENST00000303045 NRDCO43847 1150 aa17.91■□□□□ 0.46
COL22A1-201ENST00000303045 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
COL22A1-201ENST00000303045 APBB1O00213 710 aa17.9■□□□□ 0.46
COL22A1-201ENST00000303045 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
COL22A1-201ENST00000303045 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
COL22A1-201ENST00000303045 GNL2Q13823 731 aaKnown RBP17.89■□□□□ 0.45
COL22A1-201ENST00000303045 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
COL22A1-201ENST00000303045 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
COL22A1-201ENST00000303045 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
COL22A1-201ENST00000303045 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
COL22A1-201ENST00000303045 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
COL22A1-201ENST00000303045 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
COL22A1-201ENST00000303045 CHAF1AQ13111 956 aaPredicted RBP17.83■□□□□ 0.45
COL22A1-201ENST00000303045 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.45
COL22A1-201ENST00000303045 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
COL22A1-201ENST00000303045 MCCP23508 829 aa17.83■□□□□ 0.44
COL22A1-201ENST00000303045 MS4A1P11836 297 aa17.83■□□□□ 0.44
COL22A1-201ENST00000303045 PDE4CQ08493 712 aa17.81■□□□□ 0.44
COL22A1-201ENST00000303045 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
COL22A1-201ENST00000303045 PPP4R2Q9NY27 417 aa17.81■□□□□ 0.44
COL22A1-201ENST00000303045 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
COL22A1-201ENST00000303045 STK26Q9P289 416 aa17.8■□□□□ 0.44
COL22A1-201ENST00000303045 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
COL22A1-201ENST00000303045 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
COL22A1-201ENST00000303045 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
COL22A1-201ENST00000303045 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.44
COL22A1-201ENST00000303045 TMF1P82094 1093 aa17.77■□□□□ 0.43
COL22A1-201ENST00000303045 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
COL22A1-201ENST00000303045 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
COL22A1-201ENST00000303045 ARID3AQ99856 593 aa17.75■□□□□ 0.43
COL22A1-201ENST00000303045 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms