RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
PATL1-201ENST00000300146 CHIC1Q5VXU3 224 aa9.31□□□□□ -0.92
PATL1-201ENST00000300146 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
PATL1-201ENST00000300146 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
PATL1-201ENST00000300146 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
PATL1-201ENST00000300146 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
PATL1-201ENST00000300146 PLPPR3Q6T4P5 718 aa9.29□□□□□ -0.92
PATL1-201ENST00000300146 TOP2BQ02880 1626 aa9.27□□□□□ -0.93
PATL1-201ENST00000300146 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
PATL1-201ENST00000300146 PTPRGP23470 1445 aa9.24□□□□□ -0.93
PATL1-201ENST00000300146 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.93
PATL1-201ENST00000300146 CEP170Q5SW79 1584 aa9.19□□□□□ -0.94
PATL1-201ENST00000300146 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
PATL1-201ENST00000300146 PBRM1Q86U86 1689 aa9.19□□□□□ -0.94
PATL1-201ENST00000300146 ABCA5Q8WWZ7 1642 aa9.18□□□□□ -0.94
PATL1-201ENST00000300146 NUP160Q12769 1436 aa9.17□□□□□ -0.94
PATL1-201ENST00000300146 CARMIL2Q6F5E8 1435 aa9.17□□□□□ -0.94
PATL1-201ENST00000300146 ADAMTS12P58397 1594 aa9.17□□□□□ -0.94
PATL1-201ENST00000300146 BIVM-ERCC5R4GMW8 1640 aa9.16□□□□□ -0.94
PATL1-201ENST00000300146 ERICH3Q5RHP9 1530 aa9.16□□□□□ -0.94
PATL1-201ENST00000300146 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
PATL1-201ENST00000300146 CLASP1Q7Z460 1538 aa9.14□□□□□ -0.95
PATL1-201ENST00000300146 KIAA0586Q9BVV6 1533 aa9.13□□□□□ -0.95
PATL1-201ENST00000300146 TNIKQ9UKE5 1360 aa9.13□□□□□ -0.95
PATL1-201ENST00000300146 WDR97A6NE52 1622 aa9.11□□□□□ -0.95
PATL1-201ENST00000300146 ARID4BQ4LE39 1312 aaPredicted RBP9.1□□□□□ -0.95
PATL1-201ENST00000300146 MLECQ14165 292 aa9.09□□□□□ -0.95
PATL1-201ENST00000300146 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
PATL1-201ENST00000300146 PLB1Q6P1J6 1458 aa9.08□□□□□ -0.96
PATL1-201ENST00000300146 FHOD3Q2V2M9 1422 aa9.08□□□□□ -0.96
PATL1-201ENST00000300146 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
PATL1-201ENST00000300146 RAPGEF3O95398 923 aa9.06□□□□□ -0.96
PATL1-201ENST00000300146 UACAQ9BZF9 1416 aa9.05□□□□□ -0.96
PATL1-201ENST00000300146 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
PATL1-201ENST00000300146 ASXL2Q76L83 1435 aa9.04□□□□□ -0.96
PATL1-201ENST00000300146 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
PATL1-201ENST00000300146 TSPOAP1O95153 1857 aa9.02□□□□□ -0.97
PATL1-201ENST00000300146 DISP1Q96F81 1524 aa9□□□□□ -0.97
PATL1-201ENST00000300146 PRXQ9BXM0 1461 aa9□□□□□ -0.97
PATL1-201ENST00000300146 CUL7Q14999 1698 aa8.99□□□□□ -0.97
PATL1-201ENST00000300146 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
PATL1-201ENST00000300146 CD109Q6YHK3 1445 aa8.97□□□□□ -0.97
PATL1-201ENST00000300146 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.98
PATL1-201ENST00000300146 ABCC2Q92887 1545 aa8.96□□□□□ -0.98
PATL1-201ENST00000300146 GOLGA3Q08378 1498 aa8.95□□□□□ -0.98
PATL1-201ENST00000300146 APLP2Q06481 763 aa8.95□□□□□ -0.98
PATL1-201ENST00000300146 ADCY10Q96PN6 1610 aa8.95□□□□□ -0.98
PATL1-201ENST00000300146 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
PATL1-201ENST00000300146 EEA1Q15075 1411 aa8.93□□□□□ -0.98
PATL1-201ENST00000300146 AFAP1Q8N556 730 aa8.92□□□□□ -0.98
PATL1-201ENST00000300146 SHROOM2Q13796 1616 aa8.92□□□□□ -0.98
PATL1-201ENST00000300146 ATP10BO94823 1461 aa8.91□□□□□ -0.98
PATL1-201ENST00000300146 KIAA0556O60303 1618 aa8.9□□□□□ -0.98
PATL1-201ENST00000300146 SENP3Q9H4L4 574 aaPredicted RBP8.9□□□□□ -0.98
PATL1-201ENST00000300146 ESF1Q9H501 851 aaKnown RBP8.9□□□□□ -0.98
PATL1-201ENST00000300146 COL17A1Q9UMD9 1497 aaPredicted RBP8.9□□□□□ -0.99
PATL1-201ENST00000300146 ITGAEP38570 1179 aa8.9□□□□□ -0.99
PATL1-201ENST00000300146 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
PATL1-201ENST00000300146 CLIP1P30622 1438 aa8.89□□□□□ -0.99
PATL1-201ENST00000300146 HNRNPMP52272 730 aaKnown RBP eCLIP8.89□□□□□ -0.99
PATL1-201ENST00000300146 WDR7Q9Y4E6 1490 aa8.88□□□□□ -0.99
PATL1-201ENST00000300146 CEBPAP49715 358 aaPredicted RBP8.88□□□□□ -0.99
PATL1-201ENST00000300146 EPRSP07814 1512 aaKnown RBP8.88□□□□□ -0.99
PATL1-201ENST00000300146 CDK13Q14004 1512 aaKnown RBP8.88□□□□□ -0.99
PATL1-201ENST00000300146 EFCAB2Q5VUJ9 269 aa8.88□□□□□ -0.99
PATL1-201ENST00000300146 HSPA2P54652 639 aa8.87□□□□□ -0.99
PATL1-201ENST00000300146 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
PATL1-201ENST00000300146 KDM6BO15054 1643 aa8.86□□□□□ -0.99
PATL1-201ENST00000300146 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
PATL1-201ENST00000300146 GGT6Q6P531 493 aa8.85□□□□□ -0.99
PATL1-201ENST00000300146 KDM5BQ9UGL1 1544 aa8.85□□□□□ -0.99
PATL1-201ENST00000300146 ZNF644Q9H582 1327 aaPredicted RBP8.85□□□□□ -0.99
PATL1-201ENST00000300146 DIP2BQ9P265 1576 aa8.84□□□□□ -0.99
PATL1-201ENST00000300146 ARHGAP35Q9NRY4 1499 aa8.84□□□□□ -0.99
PATL1-201ENST00000300146 NUP153P49790 1475 aaKnown RBP8.83□□□□□ -1
PATL1-201ENST00000300146 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
PATL1-201ENST00000300146 MAPKBP1O60336 1514 aa8.82□□□□□ -1
PATL1-201ENST00000300146 ZCCHC11Q5TAX3 1644 aaKnown RBP8.82□□□□□ -1
PATL1-201ENST00000300146 FMN1Q68DA7 1419 aa8.82□□□□□ -1
PATL1-201ENST00000300146 SCAPERQ9BY12 1400 aa8.82□□□□□ -1
PATL1-201ENST00000300146 FAM50AQ14320 339 aaKnown RBP8.81□□□□□ -1
PATL1-201ENST00000300146 UHRF1BP1LA0JNW5 1464 aa8.81□□□□□ -1
PATL1-201ENST00000300146 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
PATL1-201ENST00000300146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.8□□□□□ -1
PATL1-201ENST00000300146 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
PATL1-201ENST00000300146 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
PATL1-201ENST00000300146 CEP162Q5TB80 1403 aa8.8□□□□□ -1
PATL1-201ENST00000300146 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
PATL1-201ENST00000300146 ABCA8O94911 1581 aa8.78□□□□□ -1
PATL1-201ENST00000300146 FANCAO15360 1455 aa8.77□□□□□ -1
PATL1-201ENST00000300146 AKNAQ7Z591 1439 aa8.77□□□□□ -1
PATL1-201ENST00000300146 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1
PATL1-201ENST00000300146 RAPGEF6Q8TEU7 1601 aa8.77□□□□□ -1.01
PATL1-201ENST00000300146 SPAG9O60271 1321 aaKnown RBP8.76□□□□□ -1.01
PATL1-201ENST00000300146 ADGRL1O94910 1474 aa8.75□□□□□ -1.01
PATL1-201ENST00000300146 YEATS2Q9ULM3 1422 aa8.75□□□□□ -1.01
PATL1-201ENST00000300146 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
PATL1-201ENST00000300146 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
PATL1-201ENST00000300146 DENND4BO75064 1496 aaPredicted RBP8.75□□□□□ -1.01
PATL1-201ENST00000300146 ARHGAP5Q13017 1502 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms