RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 RTN4Q9NQC3 1192 aaKnown RBP24.33■■□□□ 1.49
PITPNC1-201ENST00000299954 TULP1O00294 542 aaPredicted RBP24.32■■□□□ 1.48
PITPNC1-201ENST00000299954 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
PITPNC1-201ENST00000299954 BECN1Q14457 450 aa24.27■■□□□ 1.48
PITPNC1-201ENST00000299954 PTMAP06454 111 aaKnown RBP24.26■■□□□ 1.47
PITPNC1-201ENST00000299954 TAOK2Q9UL54 1235 aa24.24■■□□□ 1.47
PITPNC1-201ENST00000299954 DDRGK1Q96HY6 314 aa24.24■■□□□ 1.47
PITPNC1-201ENST00000299954 DNTTIP2Q5QJE6 756 aaKnown RBP24.22■■□□□ 1.47
PITPNC1-201ENST00000299954 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.46
PITPNC1-201ENST00000299954 GOLGA6L22H0YM25 854 aa24.17■■□□□ 1.46
PITPNC1-201ENST00000299954 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
PITPNC1-201ENST00000299954 NAP1L5Q96NT1 182 aaPredicted RBP24.15■■□□□ 1.46
PITPNC1-201ENST00000299954 RRP7BPQ9NSQ0 103 aa24.12■■□□□ 1.45
PITPNC1-201ENST00000299954 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
PITPNC1-201ENST00000299954 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
PITPNC1-201ENST00000299954 PLCB2Q00722 1185 aa24.1■■□□□ 1.45
PITPNC1-201ENST00000299954 ZRSR1Q15695 479 aaKnown RBP24.1■■□□□ 1.45
PITPNC1-201ENST00000299954 PPM1GO15355 546 aaPredicted RBP24.08■■□□□ 1.45
PITPNC1-201ENST00000299954 EIF4G2P78344 907 aaKnown RBP eCLIP24.08■■□□□ 1.45
PITPNC1-201ENST00000299954 ANP32EQ9BTT0 268 aa24.07■■□□□ 1.44
PITPNC1-201ENST00000299954 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
PITPNC1-201ENST00000299954 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
PITPNC1-201ENST00000299954 NEUROD2Q15784 382 aa24.06■■□□□ 1.44
PITPNC1-201ENST00000299954 RGL3Q3MIN7 710 aa24.05■■□□□ 1.44
PITPNC1-201ENST00000299954 RGS3P49796 1198 aa24.02■■□□□ 1.44
PITPNC1-201ENST00000299954 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
PITPNC1-201ENST00000299954 PPP1R15AO75807 674 aaPredicted RBP23.99■■□□□ 1.43
PITPNC1-201ENST00000299954 AMER1Q5JTC6 1135 aaPredicted RBP23.98■■□□□ 1.43
PITPNC1-201ENST00000299954 CASC1Q6TDU7 716 aa23.98■■□□□ 1.43
PITPNC1-201ENST00000299954 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
PITPNC1-201ENST00000299954 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
PITPNC1-201ENST00000299954 FRAT1Q92837 279 aaPredicted RBP23.93■■□□□ 1.42
PITPNC1-201ENST00000299954 KCNH8Q96L42 1107 aa23.91■■□□□ 1.42
PITPNC1-201ENST00000299954 ERICH6BQ5W0A0 696 aa23.9■■□□□ 1.42
PITPNC1-201ENST00000299954 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
PITPNC1-201ENST00000299954 ARID4BQ4LE39 1312 aaPredicted RBP23.87■■□□□ 1.41
PITPNC1-201ENST00000299954 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
PITPNC1-201ENST00000299954 NAP1L2Q9ULW6 460 aaPredicted RBP23.87■■□□□ 1.41
PITPNC1-201ENST00000299954 SPRYD3Q8NCJ5 442 aa23.87■■□□□ 1.41
PITPNC1-201ENST00000299954 HSP90AB1P08238 724 aaKnown RBP23.86■■□□□ 1.41
PITPNC1-201ENST00000299954 NOP58Q9Y2X3 529 aaKnown RBP23.86■■□□□ 1.41
PITPNC1-201ENST00000299954 KNSTRNQ9Y448 316 aa23.86■■□□□ 1.41
PITPNC1-201ENST00000299954 B4GALNT3Q6L9W6 998 aa23.81■■□□□ 1.4
PITPNC1-201ENST00000299954 NCBP3Q53F19 620 aaKnown RBP23.8■■□□□ 1.4
PITPNC1-201ENST00000299954 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
PITPNC1-201ENST00000299954 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
PITPNC1-201ENST00000299954 FGD1P98174 961 aa23.77■■□□□ 1.4
PITPNC1-201ENST00000299954 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
PITPNC1-201ENST00000299954 MAPK8IP3Q9UPT6 1336 aa23.77■■□□□ 1.4
PITPNC1-201ENST00000299954 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
PITPNC1-201ENST00000299954 CARD11Q9BXL7 1154 aa23.77■■□□□ 1.4
PITPNC1-201ENST00000299954 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
PITPNC1-201ENST00000299954 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
PITPNC1-201ENST00000299954 KCNJ4P48050 445 aa23.73■■□□□ 1.39
PITPNC1-201ENST00000299954 NPHP1O15259 732 aa23.72■■□□□ 1.39
PITPNC1-201ENST00000299954 ARID3AQ99856 593 aa23.71■■□□□ 1.39
PITPNC1-201ENST00000299954 GOLGA6L6A8MZA4 724 aa23.71■■□□□ 1.39
PITPNC1-201ENST00000299954 CLIP1P30622 1438 aa23.7■■□□□ 1.38
PITPNC1-201ENST00000299954 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
PITPNC1-201ENST00000299954 SIN3AQ96ST3 1273 aa23.67■■□□□ 1.38
PITPNC1-201ENST00000299954 DEKP35659 375 aaKnown RBP23.65■■□□□ 1.38
PITPNC1-201ENST00000299954 CLSTN1O94985 981 aa23.65■■□□□ 1.38
PITPNC1-201ENST00000299954 DRC7Q8IY82 874 aa23.64■■□□□ 1.37
PITPNC1-201ENST00000299954 GOLGA6L4A6NEF3 574 aa23.63■■□□□ 1.37
PITPNC1-201ENST00000299954 HSCBQ8IWL3 235 aa23.62■■□□□ 1.37
PITPNC1-201ENST00000299954 SOX12O15370 315 aa23.61■■□□□ 1.37
PITPNC1-201ENST00000299954 MSNP26038 577 aaKnown RBP23.61■■□□□ 1.37
PITPNC1-201ENST00000299954 CDCA8Q53HL2 280 aa23.6■■□□□ 1.37
PITPNC1-201ENST00000299954 NUDCQ9Y266 331 aa23.6■■□□□ 1.37
PITPNC1-201ENST00000299954 POGKQ9P215 609 aa23.6■■□□□ 1.37
PITPNC1-201ENST00000299954 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
PITPNC1-201ENST00000299954 CHAF1AQ13111 956 aaPredicted RBP23.58■■□□□ 1.37
PITPNC1-201ENST00000299954 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
PITPNC1-201ENST00000299954 APBB1O00213 710 aa23.56■■□□□ 1.36
PITPNC1-201ENST00000299954 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
PITPNC1-201ENST00000299954 NRDCO43847 1150 aa23.54■■□□□ 1.36
PITPNC1-201ENST00000299954 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
PITPNC1-201ENST00000299954 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.52■■□□□ 1.36
PITPNC1-201ENST00000299954 ISY1Q9ULR0 285 aaKnown RBP23.51■■□□□ 1.35
PITPNC1-201ENST00000299954 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
PITPNC1-201ENST00000299954 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
PITPNC1-201ENST00000299954 L1TD1Q5T7N2 865 aaKnown RBP23.46■■□□□ 1.35
PITPNC1-201ENST00000299954 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
PITPNC1-201ENST00000299954 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
PITPNC1-201ENST00000299954 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
PITPNC1-201ENST00000299954 RBM19Q9Y4C8 960 aaKnown RBP23.44■■□□□ 1.34
PITPNC1-201ENST00000299954 MCCP23508 829 aa23.41■■□□□ 1.34
PITPNC1-201ENST00000299954 CHMP4BQ9H444 224 aaKnown RBP23.41■■□□□ 1.34
PITPNC1-201ENST00000299954 GNL2Q13823 731 aaKnown RBP23.41■■□□□ 1.34
PITPNC1-201ENST00000299954 MS4A1P11836 297 aa23.41■■□□□ 1.34
PITPNC1-201ENST00000299954 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
PITPNC1-201ENST00000299954 DCAF11Q8TEB1 546 aa23.37■■□□□ 1.33
PITPNC1-201ENST00000299954 PNNQ9H307 717 aaKnown RBP23.35■■□□□ 1.33
PITPNC1-201ENST00000299954 PDE4CQ08493 712 aa23.34■■□□□ 1.33
PITPNC1-201ENST00000299954 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
PITPNC1-201ENST00000299954 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
PITPNC1-201ENST00000299954 TMF1P82094 1093 aa23.32■■□□□ 1.32
PITPNC1-201ENST00000299954 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
PITPNC1-201ENST00000299954 NOC3LQ8WTT2 800 aaKnown RBP23.28■■□□□ 1.32
PITPNC1-201ENST00000299954 FOXD4L1Q9NU39 408 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms