RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
TNFRSF21-201ENST00000296861 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
TNFRSF21-201ENST00000296861 ANP32EQ9BTT0 268 aa18.71■□□□□ 0.59
TNFRSF21-201ENST00000296861 KIF21BO75037 1637 aa18.71■□□□□ 0.59
TNFRSF21-201ENST00000296861 CUX2O14529 1486 aa18.7■□□□□ 0.58
TNFRSF21-201ENST00000296861 PRKCSHP14314 528 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF21-201ENST00000296861 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
TNFRSF21-201ENST00000296861 CUX1P39880 1505 aa18.66■□□□□ 0.58
TNFRSF21-201ENST00000296861 CFTRP13569 1480 aa18.65■□□□□ 0.58
TNFRSF21-201ENST00000296861 FAM9BQ8IZU0 186 aa18.64■□□□□ 0.57
TNFRSF21-201ENST00000296861 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
TNFRSF21-201ENST00000296861 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
TNFRSF21-201ENST00000296861 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
TNFRSF21-201ENST00000296861 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
TNFRSF21-201ENST00000296861 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
TNFRSF21-201ENST00000296861 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
TNFRSF21-201ENST00000296861 NESP48681 1621 aa18.61■□□□□ 0.57
TNFRSF21-201ENST00000296861 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
TNFRSF21-201ENST00000296861 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.56
TNFRSF21-201ENST00000296861 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
TNFRSF21-201ENST00000296861 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
TNFRSF21-201ENST00000296861 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF21-201ENST00000296861 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
TNFRSF21-201ENST00000296861 FOXD1Q16676 465 aa18.52■□□□□ 0.56
TNFRSF21-201ENST00000296861 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
TNFRSF21-201ENST00000296861 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
TNFRSF21-201ENST00000296861 IGF1RP08069 1367 aa18.5■□□□□ 0.55
TNFRSF21-201ENST00000296861 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
TNFRSF21-201ENST00000296861 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF21-201ENST00000296861 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
TNFRSF21-201ENST00000296861 PHLDB1Q86UU1 1377 aa18.46■□□□□ 0.55
TNFRSF21-201ENST00000296861 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
TNFRSF21-201ENST00000296861 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF21-201ENST00000296861 B4GALNT3Q6L9W6 998 aa18.42■□□□□ 0.54
TNFRSF21-201ENST00000296861 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
TNFRSF21-201ENST00000296861 MRS2Q9HD23 443 aa18.42■□□□□ 0.54
TNFRSF21-201ENST00000296861 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
TNFRSF21-201ENST00000296861 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
TNFRSF21-201ENST00000296861 NBR1Q14596 966 aa18.4■□□□□ 0.54
TNFRSF21-201ENST00000296861 FBLN2P98095 1184 aa18.39■□□□□ 0.53
TNFRSF21-201ENST00000296861 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF21-201ENST00000296861 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
TNFRSF21-201ENST00000296861 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
TNFRSF21-201ENST00000296861 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
TNFRSF21-201ENST00000296861 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
TNFRSF21-201ENST00000296861 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
TNFRSF21-201ENST00000296861 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
TNFRSF21-201ENST00000296861 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
TNFRSF21-201ENST00000296861 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF21-201ENST00000296861 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
TNFRSF21-201ENST00000296861 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
TNFRSF21-201ENST00000296861 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
TNFRSF21-201ENST00000296861 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
TNFRSF21-201ENST00000296861 LRRC9Q6ZRR7 1453 aa18.21■□□□□ 0.51
TNFRSF21-201ENST00000296861 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
TNFRSF21-201ENST00000296861 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
TNFRSF21-201ENST00000296861 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
TNFRSF21-201ENST00000296861 MSH5O43196 834 aa18.2■□□□□ 0.5
TNFRSF21-201ENST00000296861 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
TNFRSF21-201ENST00000296861 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
TNFRSF21-201ENST00000296861 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
TNFRSF21-201ENST00000296861 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
TNFRSF21-201ENST00000296861 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
TNFRSF21-201ENST00000296861 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■■ 31.6
TNFRSF21-201ENST00000296861 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
TNFRSF21-201ENST00000296861 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
TNFRSF21-201ENST00000296861 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
TNFRSF21-201ENST00000296861 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
TNFRSF21-201ENST00000296861 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
TNFRSF21-201ENST00000296861 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF21-201ENST00000296861 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
TNFRSF21-201ENST00000296861 ABCA10Q8WWZ4 1543 aa18.09■□□□□ 0.49
TNFRSF21-201ENST00000296861 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
TNFRSF21-201ENST00000296861 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF21-201ENST00000296861 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF21-201ENST00000296861 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
TNFRSF21-201ENST00000296861 PRKRIP1Q9H875 184 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF21-201ENST00000296861 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF21-201ENST00000296861 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
TNFRSF21-201ENST00000296861 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
TNFRSF21-201ENST00000296861 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
TNFRSF21-201ENST00000296861 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
TNFRSF21-201ENST00000296861 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
TNFRSF21-201ENST00000296861 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
TNFRSF21-201ENST00000296861 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
TNFRSF21-201ENST00000296861 PTPRKQ15262 1439 aa17.99■□□□□ 0.47
TNFRSF21-201ENST00000296861 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
TNFRSF21-201ENST00000296861 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
TNFRSF21-201ENST00000296861 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
TNFRSF21-201ENST00000296861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
TNFRSF21-201ENST00000296861 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF21-201ENST00000296861 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
TNFRSF21-201ENST00000296861 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
TNFRSF21-201ENST00000296861 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF21-201ENST00000296861 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
TNFRSF21-201ENST00000296861 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
TNFRSF21-201ENST00000296861 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF21-201ENST00000296861 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
TNFRSF21-201ENST00000296861 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
TNFRSF21-201ENST00000296861 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms