RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 FAM212AQ96EL1 285 aa17.47■□□□□ 0.39
C3orf49-201ENST00000295896 HS6ST3Q8IZP7 471 aa17.45■□□□□ 0.38
C3orf49-201ENST00000295896 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
C3orf49-201ENST00000295896 MNX1P50219 401 aaPredicted RBP17.43■□□□□ 0.38
C3orf49-201ENST00000295896 RNF25Q96BH1 459 aaPredicted RBP17.4■□□□□ 0.38
C3orf49-201ENST00000295896 BCANQ96GW7 911 aa17.4■□□□□ 0.38
C3orf49-201ENST00000295896 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
C3orf49-201ENST00000295896 PITPNM1O00562 1244 aa17.36■□□□□ 0.37
C3orf49-201ENST00000295896 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
C3orf49-201ENST00000295896 CHRM1P11229 460 aaPredicted RBP17.31■□□□□ 0.36
C3orf49-201ENST00000295896 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
C3orf49-201ENST00000295896 RASEFQ8IZ41 740 aa17.29■□□□□ 0.36
C3orf49-201ENST00000295896 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
C3orf49-201ENST00000295896 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
C3orf49-201ENST00000295896 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
C3orf49-201ENST00000295896 STK25O00506 426 aa17.17■□□□□ 0.34
C3orf49-201ENST00000295896 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
C3orf49-201ENST00000295896 PYGBP11216 843 aa17.11■□□□□ 0.33
C3orf49-201ENST00000295896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.06■□□□□ 0.32
C3orf49-201ENST00000295896 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
C3orf49-201ENST00000295896 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
C3orf49-201ENST00000295896 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
C3orf49-201ENST00000295896 RYDENQ9NUL5 291 aaKnown RBP17.05■□□□□ 0.32
C3orf49-201ENST00000295896 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
C3orf49-201ENST00000295896 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
C3orf49-201ENST00000295896 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
C3orf49-201ENST00000295896 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
C3orf49-201ENST00000295896 TSPYL2Q9H2G4 693 aaPredicted RBP16.99■□□□□ 0.31
C3orf49-201ENST00000295896 PRKAR2AP13861 404 aaKnown RBP16.93■□□□□ 0.3
C3orf49-201ENST00000295896 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
C3orf49-201ENST00000295896 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
C3orf49-201ENST00000295896 NBR1Q14596 966 aa16.86■□□□□ 0.29
C3orf49-201ENST00000295896 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
C3orf49-201ENST00000295896 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
C3orf49-201ENST00000295896 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.28
C3orf49-201ENST00000295896 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
C3orf49-201ENST00000295896 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
C3orf49-201ENST00000295896 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
C3orf49-201ENST00000295896 PCDHB13Q9Y5F0 798 aa16.78■□□□□ 0.28
C3orf49-201ENST00000295896 PSEN1P49768 467 aa16.74■□□□□ 0.27
C3orf49-201ENST00000295896 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
C3orf49-201ENST00000295896 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
C3orf49-201ENST00000295896 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
C3orf49-201ENST00000295896 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
C3orf49-201ENST00000295896 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
C3orf49-201ENST00000295896 MFRPQ9BY79 579 aa16.61■□□□□ 0.25
C3orf49-201ENST00000295896 MAP3K13O43283 966 aa16.6■□□□□ 0.25
C3orf49-201ENST00000295896 WDR70Q9NW82 654 aa16.54■□□□□ 0.24
C3orf49-201ENST00000295896 SOX12O15370 315 aa16.53■□□□□ 0.24
C3orf49-201ENST00000295896 NLRP6P59044 892 aa16.53■□□□□ 0.24
C3orf49-201ENST00000295896 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
C3orf49-201ENST00000295896 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
C3orf49-201ENST00000295896 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
C3orf49-201ENST00000295896 CABP2Q9NPB3 220 aa16.51■□□□□ 0.23
C3orf49-201ENST00000295896 EFCAB3Q8N7B9 438 aa16.5■□□□□ 0.23
C3orf49-201ENST00000295896 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
C3orf49-201ENST00000295896 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
C3orf49-201ENST00000295896 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
C3orf49-201ENST00000295896 KCNV2Q8TDN2 545 aa16.4■□□□□ 0.22
C3orf49-201ENST00000295896 PPP1R37O75864 691 aa16.39■□□□□ 0.21
C3orf49-201ENST00000295896 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
C3orf49-201ENST00000295896 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
C3orf49-201ENST00000295896 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
C3orf49-201ENST00000295896 MS4A3Q96HJ5 214 aa16.27■□□□□ 0.2
C3orf49-201ENST00000295896 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
C3orf49-201ENST00000295896 E2F4Q16254 413 aa16.25■□□□□ 0.19
C3orf49-201ENST00000295896 MS4A4AQ96JQ5 239 aa16.25■□□□□ 0.19
C3orf49-201ENST00000295896 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
C3orf49-201ENST00000295896 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
C3orf49-201ENST00000295896 TIE1P35590 1138 aa16.21■□□□□ 0.19
C3orf49-201ENST00000295896 PDE4AP27815 886 aa16.2■□□□□ 0.18
C3orf49-201ENST00000295896 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
C3orf49-201ENST00000295896 NCKAP5LQ9HCH0 1330 aa16.18■□□□□ 0.18
C3orf49-201ENST00000295896 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
C3orf49-201ENST00000295896 MFSD10Q14728 455 aa16.15■□□□□ 0.18
C3orf49-201ENST00000295896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
C3orf49-201ENST00000295896 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
C3orf49-201ENST00000295896 CRISPLD2Q9H0B8 497 aa16.14■□□□□ 0.17
C3orf49-201ENST00000295896 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
C3orf49-201ENST00000295896 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
C3orf49-201ENST00000295896 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
C3orf49-201ENST00000295896 CLCN6P51797 869 aa16.07■□□□□ 0.16
C3orf49-201ENST00000295896 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
C3orf49-201ENST00000295896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
C3orf49-201ENST00000295896 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
C3orf49-201ENST00000295896 TESPA1A2RU30 521 aaPredicted RBP16.03■□□□□ 0.16
C3orf49-201ENST00000295896 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
C3orf49-201ENST00000295896 SEMA3EO15041 775 aa16■□□□□ 0.15
C3orf49-201ENST00000295896 CAMK2BQ13554 666 aa16■□□□□ 0.15
C3orf49-201ENST00000295896 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
C3orf49-201ENST00000295896 SMYD5Q6GMV2 418 aa15.97■□□□□ 0.15
C3orf49-201ENST00000295896 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
C3orf49-201ENST00000295896 HAX1O00165 279 aa15.93■□□□□ 0.14
C3orf49-201ENST00000295896 PPP1R15BQ5SWA1 713 aa15.93■□□□□ 0.14
C3orf49-201ENST00000295896 ZC3H15Q8WU90 426 aaKnown RBP15.9■□□□□ 0.14
C3orf49-201ENST00000295896 MICALL2Q8IY33 904 aa15.87■□□□□ 0.13
C3orf49-201ENST00000295896 IER5LQ5T953 404 aa15.86■□□□□ 0.13
C3orf49-201ENST00000295896 PDCD7Q8N8D1 485 aaKnown RBP15.84■□□□□ 0.13
C3orf49-201ENST00000295896 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
C3orf49-201ENST00000295896 DPY19L2Q6NUT2 758 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms