RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 PLCB2Q00722 1185 aa22.19■■□□□ 1.14
LRRC58-201ENST00000295628 DDRGK1Q96HY6 314 aa22.19■■□□□ 1.14
LRRC58-201ENST00000295628 TONSLQ96HA7 1378 aa22.15■■□□□ 1.14
LRRC58-201ENST00000295628 ANP32EQ9BTT0 268 aa22.12■■□□□ 1.13
LRRC58-201ENST00000295628 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
LRRC58-201ENST00000295628 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
LRRC58-201ENST00000295628 CASC1Q6TDU7 716 aa22.06■■□□□ 1.12
LRRC58-201ENST00000295628 CLSTN1O94985 981 aa22.06■■□□□ 1.12
LRRC58-201ENST00000295628 GOLGA6L6A8MZA4 724 aa22.04■■□□□ 1.12
LRRC58-201ENST00000295628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.12
LRRC58-201ENST00000295628 ERICH6BQ5W0A0 696 aa21.99■■□□□ 1.11
LRRC58-201ENST00000295628 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
LRRC58-201ENST00000295628 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
LRRC58-201ENST00000295628 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
LRRC58-201ENST00000295628 NAP1L2Q9ULW6 460 aaPredicted RBP21.94■■□□□ 1.1
LRRC58-201ENST00000295628 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
LRRC58-201ENST00000295628 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
LRRC58-201ENST00000295628 CHAF1AQ13111 956 aaPredicted RBP21.9■■□□□ 1.1
LRRC58-201ENST00000295628 NPHP1O15259 732 aa21.89■■□□□ 1.1
LRRC58-201ENST00000295628 FTSJ3Q8IY81 847 aaKnown RBP21.86■■□□□ 1.09
LRRC58-201ENST00000295628 ARID3AQ99856 593 aa21.86■■□□□ 1.09
LRRC58-201ENST00000295628 DRC7Q8IY82 874 aa21.86■■□□□ 1.09
LRRC58-201ENST00000295628 PRM3Q9NNZ6 103 aa21.86■■□□□ 1.09
LRRC58-201ENST00000295628 HSP90AB1P08238 724 aaKnown RBP21.85■■□□□ 1.09
LRRC58-201ENST00000295628 FGD1P98174 961 aa21.85■■□□□ 1.09
LRRC58-201ENST00000295628 HAP1P54257 671 aaPredicted RBP21.84■■□□□ 1.09
LRRC58-201ENST00000295628 NRDCO43847 1150 aa21.83■■□□□ 1.09
LRRC58-201ENST00000295628 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
LRRC58-201ENST00000295628 MSNP26038 577 aaKnown RBP21.81■■□□□ 1.08
LRRC58-201ENST00000295628 NOC3LQ8WTT2 800 aaKnown RBP21.8■■□□□ 1.08
LRRC58-201ENST00000295628 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
LRRC58-201ENST00000295628 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
LRRC58-201ENST00000295628 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
LRRC58-201ENST00000295628 KCNJ4P48050 445 aa21.75■■□□□ 1.07
LRRC58-201ENST00000295628 GOLGA2Q08379 1002 aa21.73■■□□□ 1.07
LRRC58-201ENST00000295628 OS9Q13438 667 aaPredicted RBP21.73■■□□□ 1.07
LRRC58-201ENST00000295628 GOLGA6L4A6NEF3 574 aa21.72■■□□□ 1.07
LRRC58-201ENST00000295628 TNNT3P45378 269 aaPredicted RBP21.7■■□□□ 1.06
LRRC58-201ENST00000295628 KIAA2012Q0VF49 1180 aa21.7■■□□□ 1.06
LRRC58-201ENST00000295628 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
LRRC58-201ENST00000295628 SPRYD3Q8NCJ5 442 aa21.69■■□□□ 1.06
LRRC58-201ENST00000295628 ISY1Q9ULR0 285 aaKnown RBP21.69■■□□□ 1.06
LRRC58-201ENST00000295628 RGS3P49796 1198 aa21.68■■□□□ 1.06
LRRC58-201ENST00000295628 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
LRRC58-201ENST00000295628 PDE4CQ08493 712 aa21.67■■□□□ 1.06
LRRC58-201ENST00000295628 L1TD1Q5T7N2 865 aaKnown RBP21.66■■□□□ 1.06
LRRC58-201ENST00000295628 NOP58Q9Y2X3 529 aaKnown RBP21.64■■□□□ 1.06
LRRC58-201ENST00000295628 PPP1R15AO75807 674 aaPredicted RBP21.64■■□□□ 1.05
LRRC58-201ENST00000295628 MIER1Q8N108 512 aa21.64■■□□□ 1.05
LRRC58-201ENST00000295628 NEUROD2Q15784 382 aa21.62■■□□□ 1.05
LRRC58-201ENST00000295628 A0A0U1RQG5 324 aaPredicted RBP21.61■■□□□ 1.05
LRRC58-201ENST00000295628 SUPT16HQ9Y5B9 1047 aaKnown RBP21.61■■□□□ 1.05
LRRC58-201ENST00000295628 GNL2Q13823 731 aaKnown RBP21.59■■□□□ 1.05
LRRC58-201ENST00000295628 FRAT1Q92837 279 aaPredicted RBP21.59■■□□□ 1.05
LRRC58-201ENST00000295628 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
LRRC58-201ENST00000295628 HSCBQ8IWL3 235 aa21.56■■□□□ 1.04
LRRC58-201ENST00000295628 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
LRRC58-201ENST00000295628 ANO8Q9HCE9 1232 aaPredicted RBP21.53■■□□□ 1.04
LRRC58-201ENST00000295628 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
LRRC58-201ENST00000295628 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
LRRC58-201ENST00000295628 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
LRRC58-201ENST00000295628 GOLGA6L1Q8N7Z2 621 aa21.48■■□□□ 1.03
LRRC58-201ENST00000295628 DEKP35659 375 aaKnown RBP21.47■■□□□ 1.03
LRRC58-201ENST00000295628 FBXO3Q9UK99 471 aa21.47■■□□□ 1.03
LRRC58-201ENST00000295628 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
LRRC58-201ENST00000295628 MCCP23508 829 aa21.44■■□□□ 1.02
LRRC58-201ENST00000295628 TSPY4P0CV99 314 aa21.43■■□□□ 1.02
LRRC58-201ENST00000295628 TSPY10P0CW01 314 aa21.43■■□□□ 1.02
LRRC58-201ENST00000295628 RGL3Q3MIN7 710 aa21.43■■□□□ 1.02
LRRC58-201ENST00000295628 GZF1Q9H116 711 aaPredicted RBP21.42■■□□□ 1.02
LRRC58-201ENST00000295628 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
LRRC58-201ENST00000295628 CREBRFQ8IUR6 639 aa21.37■■□□□ 1.01
LRRC58-201ENST00000295628 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
LRRC58-201ENST00000295628 B4GALNT3Q6L9W6 998 aa21.35■■□□□ 1.01
LRRC58-201ENST00000295628 CALRP27797 417 aaKnown RBP21.34■■□□□ 1.01
LRRC58-201ENST00000295628 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1.01
LRRC58-201ENST00000295628 SETQ01105 290 aaPredicted RBP21.33■■□□□ 1.01
LRRC58-201ENST00000295628 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1
LRRC58-201ENST00000295628 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1
LRRC58-201ENST00000295628 CHMP4BQ9H444 224 aaKnown RBP21.32■■□□□ 1
LRRC58-201ENST00000295628 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
LRRC58-201ENST00000295628 APBB1O00213 710 aa21.31■■□□□ 1
LRRC58-201ENST00000295628 PPP4R2Q9NY27 417 aa21.31■■□□□ 1
LRRC58-201ENST00000295628 TPM4P67936 248 aa21.29■■□□□ 1
LRRC58-201ENST00000295628 NUDCQ9Y266 331 aa21.29■■□□□ 1
LRRC58-201ENST00000295628 KIAA1211Q6ZU35 1233 aa21.27■■□□□ 1
LRRC58-201ENST00000295628 SOX12O15370 315 aa21.25■□□□□ 0.99
LRRC58-201ENST00000295628 ABCC9O60706 1549 aa21.25■□□□□ 0.99
LRRC58-201ENST00000295628 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
LRRC58-201ENST00000295628 MS4A1P11836 297 aa21.24■□□□□ 0.99
LRRC58-201ENST00000295628 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
LRRC58-201ENST00000295628 GBP4Q96PP9 640 aa21.22■□□□□ 0.99
LRRC58-201ENST00000295628 CEP89Q96ST8 783 aa21.22■□□□□ 0.99
LRRC58-201ENST00000295628 POGKQ9P215 609 aa21.22■□□□□ 0.99
LRRC58-201ENST00000295628 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
LRRC58-201ENST00000295628 RASSF8Q8NHQ8 419 aa21.19■□□□□ 0.98
LRRC58-201ENST00000295628 WWC1Q8IX03 1113 aa21.18■□□□□ 0.98
LRRC58-201ENST00000295628 SYAP1Q96A49 352 aaPredicted RBP21.18■□□□□ 0.98
LRRC58-201ENST00000295628 CARD11Q9BXL7 1154 aa21.18■□□□□ 0.98
LRRC58-201ENST00000295628 PTMSP20962 102 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms