RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
SYVN1-201ENST00000294256 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SYVN1-201ENST00000294256 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
SYVN1-201ENST00000294256 PHLDB1Q86UU1 1377 aa25.62■■□□□ 1.69
SYVN1-201ENST00000294256 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
SYVN1-201ENST00000294256 TIAM1Q13009 1591 aa25.57■■□□□ 1.68
SYVN1-201ENST00000294256 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
SYVN1-201ENST00000294256 SIN3AQ96ST3 1273 aa25.55■■□□□ 1.68
SYVN1-201ENST00000294256 LRRC9Q6ZRR7 1453 aa25.54■■□□□ 1.68
SYVN1-201ENST00000294256 ARID3CA6NKF2 412 aa25.53■■□□□ 1.68
SYVN1-201ENST00000294256 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
SYVN1-201ENST00000294256 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
SYVN1-201ENST00000294256 PCF11O94913 1555 aaKnown RBP25.5■■□□□ 1.67
SYVN1-201ENST00000294256 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
SYVN1-201ENST00000294256 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
SYVN1-201ENST00000294256 HIRIP3Q9BW71 556 aaPredicted RBP25.43■■□□□ 1.66
SYVN1-201ENST00000294256 SETD5Q9C0A6 1442 aa25.42■■□□□ 1.66
SYVN1-201ENST00000294256 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
SYVN1-201ENST00000294256 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
SYVN1-201ENST00000294256 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
SYVN1-201ENST00000294256 MAP3K1Q13233 1512 aa25.29■■□□□ 1.64
SYVN1-201ENST00000294256 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
SYVN1-201ENST00000294256 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
SYVN1-201ENST00000294256 MAPKBP1O60336 1514 aa25.29■■□□□ 1.64
SYVN1-201ENST00000294256 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
SYVN1-201ENST00000294256 FYCO1Q9BQS8 1478 aa25.26■■□□□ 1.63
SYVN1-201ENST00000294256 KCNH8Q96L42 1107 aa25.26■■□□□ 1.63
SYVN1-201ENST00000294256 DDX10Q13206 875 aaKnown RBP25.26■■□□□ 1.63
SYVN1-201ENST00000294256 FMN1Q68DA7 1419 aa25.25■■□□□ 1.63
SYVN1-201ENST00000294256 CUL7Q14999 1698 aa25.25■■□□□ 1.63
SYVN1-201ENST00000294256 AQRO60306 1485 aaKnown RBP eCLIP25.24■■□□□ 1.632e-7■■■■□ 19.3
SYVN1-201ENST00000294256 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
SYVN1-201ENST00000294256 CTTNBP2Q8WZ74 1663 aa25.22■■□□□ 1.63
SYVN1-201ENST00000294256 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
SYVN1-201ENST00000294256 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
SYVN1-201ENST00000294256 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
SYVN1-201ENST00000294256 FGD6Q6ZV73 1430 aa25.17■■□□□ 1.62
SYVN1-201ENST00000294256 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
SYVN1-201ENST00000294256 PELP1Q8IZL8 1130 aaKnown RBP25.14■■□□□ 1.62
SYVN1-201ENST00000294256 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.61
SYVN1-201ENST00000294256 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
SYVN1-201ENST00000294256 PTPRKQ15262 1439 aa25.12■■□□□ 1.61
SYVN1-201ENST00000294256 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
SYVN1-201ENST00000294256 NCOA2Q15596 1464 aa25.08■■□□□ 1.61
SYVN1-201ENST00000294256 FBLN2P98095 1184 aa25.07■■□□□ 1.6
SYVN1-201ENST00000294256 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
SYVN1-201ENST00000294256 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
SYVN1-201ENST00000294256 CCDC18Q5T9S5 1454 aa25.03■■□□□ 1.6
SYVN1-201ENST00000294256 LRRIQ1Q96JM4 1722 aa25.01■■□□□ 1.59
SYVN1-201ENST00000294256 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
SYVN1-201ENST00000294256 GRIN2BQ13224 1484 aa25■■□□□ 1.59
SYVN1-201ENST00000294256 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
SYVN1-201ENST00000294256 SAMD9Q5K651 1589 aa24.98■■□□□ 1.59
SYVN1-201ENST00000294256 FOXD1Q16676 465 aa24.98■■□□□ 1.59
SYVN1-201ENST00000294256 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
SYVN1-201ENST00000294256 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
SYVN1-201ENST00000294256 MAGI3Q5TCQ9 1506 aa24.95■■□□□ 1.58
SYVN1-201ENST00000294256 NAIPQ13075 1403 aa24.92■■□□□ 1.58
SYVN1-201ENST00000294256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.58
SYVN1-201ENST00000294256 HFM1A2PYH4 1435 aa24.9■■□□□ 1.58
SYVN1-201ENST00000294256 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
SYVN1-201ENST00000294256 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.57
SYVN1-201ENST00000294256 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
SYVN1-201ENST00000294256 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
SYVN1-201ENST00000294256 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
SYVN1-201ENST00000294256 PTPN23Q9H3S7 1636 aa24.86■■□□□ 1.57
SYVN1-201ENST00000294256 UACAQ9BZF9 1416 aa24.86■■□□□ 1.57
SYVN1-201ENST00000294256 BCANQ96GW7 911 aa24.86■■□□□ 1.57
SYVN1-201ENST00000294256 EHBP1L1Q8N3D4 1523 aa24.86■■□□□ 1.57
SYVN1-201ENST00000294256 ZNF777Q9ULD5 760 aaPredicted RBP24.85■■□□□ 1.57
SYVN1-201ENST00000294256 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
SYVN1-201ENST00000294256 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
SYVN1-201ENST00000294256 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
SYVN1-201ENST00000294256 EPRSP07814 1512 aaKnown RBP24.84■■□□□ 1.57
SYVN1-201ENST00000294256 ANP32CO43423 234 aa24.83■■□□□ 1.57
SYVN1-201ENST00000294256 UGGT2Q9NYU1 1516 aa24.8■■□□□ 1.56
SYVN1-201ENST00000294256 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
SYVN1-201ENST00000294256 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
SYVN1-201ENST00000294256 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
SYVN1-201ENST00000294256 HECW1Q76N89 1606 aa24.76■■□□□ 1.55
SYVN1-201ENST00000294256 MPHOSPH9Q99550 1183 aa24.76■■□□□ 1.55
SYVN1-201ENST00000294256 CNGB1Q14028 1251 aaPredicted RBP24.73■■□□□ 1.55
SYVN1-201ENST00000294256 KDM6BO15054 1643 aa24.71■■□□□ 1.55
SYVN1-201ENST00000294256 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
SYVN1-201ENST00000294256 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
SYVN1-201ENST00000294256 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
SYVN1-201ENST00000294256 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
SYVN1-201ENST00000294256 WDR62O43379 1518 aa24.67■■□□□ 1.54
SYVN1-201ENST00000294256 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
SYVN1-201ENST00000294256 FKBP8Q14318 412 aa24.65■■□□□ 1.54
SYVN1-201ENST00000294256 CFDP1Q9UEE9 299 aaPredicted RBP24.65■■□□□ 1.54
SYVN1-201ENST00000294256 ARHGEF11O15085 1522 aa24.64■■□□□ 1.54
SYVN1-201ENST00000294256 ZNF326Q5BKZ1 582 aaKnown RBP24.64■■□□□ 1.54
SYVN1-201ENST00000294256 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.53
SYVN1-201ENST00000294256 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
SYVN1-201ENST00000294256 KIAA0586Q9BVV6 1533 aa24.63■■□□□ 1.53
SYVN1-201ENST00000294256 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
SYVN1-201ENST00000294256 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
SYVN1-201ENST00000294256 NUP153P49790 1475 aaKnown RBP24.6■■□□□ 1.53
SYVN1-201ENST00000294256 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms