RNA–Protein interactions for RNA: ENST00000290858.10

CBFB-201, Transcript of core-binding factor subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBFB, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-201ENST00000290858 NESP48681 1621 aa23.72■■□□□ 1.39
CBFB-201ENST00000290858 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
CBFB-201ENST00000290858 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
CBFB-201ENST00000290858 CLSPNQ9HAW4 1339 aa23.7■■□□□ 1.38
CBFB-201ENST00000290858 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
CBFB-201ENST00000290858 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.37
CBFB-201ENST00000290858 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
CBFB-201ENST00000290858 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
CBFB-201ENST00000290858 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
CBFB-201ENST00000290858 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
CBFB-201ENST00000290858 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
CBFB-201ENST00000290858 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
CBFB-201ENST00000290858 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
CBFB-201ENST00000290858 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
CBFB-201ENST00000290858 BCANQ96GW7 911 aa23.52■■□□□ 1.36
CBFB-201ENST00000290858 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
CBFB-201ENST00000290858 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
CBFB-201ENST00000290858 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
CBFB-201ENST00000290858 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
CBFB-201ENST00000290858 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
CBFB-201ENST00000290858 TOPBP1Q92547 1522 aa23.46■■□□□ 1.35
CBFB-201ENST00000290858 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
CBFB-201ENST00000290858 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
CBFB-201ENST00000290858 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
CBFB-201ENST00000290858 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
CBFB-201ENST00000290858 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
CBFB-201ENST00000290858 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
CBFB-201ENST00000290858 PTPRKQ15262 1439 aa23.32■■□□□ 1.32
CBFB-201ENST00000290858 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
CBFB-201ENST00000290858 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
CBFB-201ENST00000290858 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
CBFB-201ENST00000290858 CASKIN1Q8WXD9 1431 aa23.29■■□□□ 1.32
CBFB-201ENST00000290858 MYT1Q01538 1121 aa23.29■■□□□ 1.32
CBFB-201ENST00000290858 FGD6Q6ZV73 1430 aa23.26■■□□□ 1.31
CBFB-201ENST00000290858 FYCO1Q9BQS8 1478 aa23.26■■□□□ 1.31
CBFB-201ENST00000290858 CFAP43Q8NDM7 1665 aa23.25■■□□□ 1.31
CBFB-201ENST00000290858 TONSLQ96HA7 1378 aa23.24■■□□□ 1.31
CBFB-201ENST00000290858 FOXD1Q16676 465 aa23.23■■□□□ 1.31
CBFB-201ENST00000290858 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
CBFB-201ENST00000290858 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
CBFB-201ENST00000290858 FKBP8Q14318 412 aa23.19■■□□□ 1.3
CBFB-201ENST00000290858 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
CBFB-201ENST00000290858 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
CBFB-201ENST00000290858 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
CBFB-201ENST00000290858 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
CBFB-201ENST00000290858 ANP32CO43423 234 aa23.14■■□□□ 1.3
CBFB-201ENST00000290858 EFCAB5A4FU69 1503 aa23.13■■□□□ 1.29
CBFB-201ENST00000290858 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
CBFB-201ENST00000290858 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
CBFB-201ENST00000290858 CUL7Q14999 1698 aa23.09■■□□□ 1.29
CBFB-201ENST00000290858 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
CBFB-201ENST00000290858 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.29
CBFB-201ENST00000290858 NAIPQ13075 1403 aa23.08■■□□□ 1.29
CBFB-201ENST00000290858 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
CBFB-201ENST00000290858 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
CBFB-201ENST00000290858 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
CBFB-201ENST00000290858 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
CBFB-201ENST00000290858 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
CBFB-201ENST00000290858 ZNF644Q9H582 1327 aaPredicted RBP23.02■■□□□ 1.28
CBFB-201ENST00000290858 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
CBFB-201ENST00000290858 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
CBFB-201ENST00000290858 IRX6P78412 446 aaPredicted RBP23.02■■□□□ 1.27
CBFB-201ENST00000290858 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
CBFB-201ENST00000290858 CDK13Q14004 1512 aaKnown RBP23■■□□□ 1.27
CBFB-201ENST00000290858 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
CBFB-201ENST00000290858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.99■■□□□ 1.279e-8■□□□□ 8.7
CBFB-201ENST00000290858 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
CBFB-201ENST00000290858 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
CBFB-201ENST00000290858 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
CBFB-201ENST00000290858 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
CBFB-201ENST00000290858 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.26
CBFB-201ENST00000290858 FBLN2P98095 1184 aa22.94■■□□□ 1.26
CBFB-201ENST00000290858 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
CBFB-201ENST00000290858 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
CBFB-201ENST00000290858 CCDC184Q52MB2 194 aa22.93■■□□□ 1.26
CBFB-201ENST00000290858 SENP3-EIF4A1A0A087X0R7 540 aa22.93■■□□□ 1.26
CBFB-201ENST00000290858 KDM6BO15054 1643 aa22.92■■□□□ 1.26
CBFB-201ENST00000290858 WASHC2AQ641Q2 1341 aa22.92■■□□□ 1.26
CBFB-201ENST00000290858 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
CBFB-201ENST00000290858 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
CBFB-201ENST00000290858 NEFLP07196 543 aa22.9■■□□□ 1.26
CBFB-201ENST00000290858 SUPT6HQ7KZ85 1726 aaKnown RBP22.89■■□□□ 1.26
CBFB-201ENST00000290858 CCER2I3L3R5 266 aa22.88■■□□□ 1.25
CBFB-201ENST00000290858 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
CBFB-201ENST00000290858 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
CBFB-201ENST00000290858 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
CBFB-201ENST00000290858 DENND4BO75064 1496 aaPredicted RBP22.87■■□□□ 1.25
CBFB-201ENST00000290858 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
CBFB-201ENST00000290858 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
CBFB-201ENST00000290858 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
CBFB-201ENST00000290858 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
CBFB-201ENST00000290858 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
CBFB-201ENST00000290858 NBPF8Q3BBV2 869 aa22.82■■□□□ 1.24
CBFB-201ENST00000290858 FAM9BQ8IZU0 186 aa22.82■■□□□ 1.24
CBFB-201ENST00000290858 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
CBFB-201ENST00000290858 EIF4G2P78344 907 aaKnown RBP eCLIP22.82■■□□□ 1.24
CBFB-201ENST00000290858 ANP32EQ9BTT0 268 aa22.82■■□□□ 1.24
CBFB-201ENST00000290858 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
CBFB-201ENST00000290858 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
CBFB-201ENST00000290858 ARHGEF11O15085 1522 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms