RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 KIF21BO75037 1637 aa22.24■■□□□ 1.15
CACNA2D3-201ENST00000288197 NBR1Q14596 966 aa22.24■■□□□ 1.15
CACNA2D3-201ENST00000288197 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
CACNA2D3-201ENST00000288197 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
CACNA2D3-201ENST00000288197 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
CACNA2D3-201ENST00000288197 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
CACNA2D3-201ENST00000288197 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
CACNA2D3-201ENST00000288197 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
CACNA2D3-201ENST00000288197 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
CACNA2D3-201ENST00000288197 NPM2Q86SE8 214 aaKnown RBP22.14■■□□□ 1.13
CACNA2D3-201ENST00000288197 FOXD1Q16676 465 aa22.13■■□□□ 1.13
CACNA2D3-201ENST00000288197 CUX2O14529 1486 aa22.13■■□□□ 1.13
CACNA2D3-201ENST00000288197 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
CACNA2D3-201ENST00000288197 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
CACNA2D3-201ENST00000288197 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
CACNA2D3-201ENST00000288197 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
CACNA2D3-201ENST00000288197 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D3-201ENST00000288197 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
CACNA2D3-201ENST00000288197 RTL5Q5HYW3 569 aaPredicted RBP22.05■■□□□ 1.12
CACNA2D3-201ENST00000288197 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
CACNA2D3-201ENST00000288197 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
CACNA2D3-201ENST00000288197 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
CACNA2D3-201ENST00000288197 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
CACNA2D3-201ENST00000288197 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
CACNA2D3-201ENST00000288197 FHOD3Q2V2M9 1422 aa21.96■■□□□ 1.11
CACNA2D3-201ENST00000288197 KDM2AQ9Y2K7 1162 aa21.92■■□□□ 1.1
CACNA2D3-201ENST00000288197 FBLN2P98095 1184 aa21.92■■□□□ 1.1
CACNA2D3-201ENST00000288197 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
CACNA2D3-201ENST00000288197 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
CACNA2D3-201ENST00000288197 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
CACNA2D3-201ENST00000288197 RRBP1Q9P2E9 1410 aaKnown RBP21.87■■□□□ 1.09
CACNA2D3-201ENST00000288197 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
CACNA2D3-201ENST00000288197 TMC1Q8TDI8 760 aa21.87■■□□□ 1.09
CACNA2D3-201ENST00000288197 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
CACNA2D3-201ENST00000288197 IGF1RP08069 1367 aa21.84■■□□□ 1.09
CACNA2D3-201ENST00000288197 DAXXQ9UER7 740 aaPredicted RBP21.83■■□□□ 1.09
CACNA2D3-201ENST00000288197 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.08
CACNA2D3-201ENST00000288197 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.08
CACNA2D3-201ENST00000288197 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
CACNA2D3-201ENST00000288197 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
CACNA2D3-201ENST00000288197 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
CACNA2D3-201ENST00000288197 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
CACNA2D3-201ENST00000288197 MSH5O43196 834 aa21.75■■□□□ 1.07
CACNA2D3-201ENST00000288197 DEKP35659 375 aaKnown RBP21.74■■□□□ 1.07
CACNA2D3-201ENST00000288197 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
CACNA2D3-201ENST00000288197 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
CACNA2D3-201ENST00000288197 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.07
CACNA2D3-201ENST00000288197 LRRC9Q6ZRR7 1453 aa21.7■■□□□ 1.06
CACNA2D3-201ENST00000288197 NOP58Q9Y2X3 529 aaKnown RBP21.69■■□□□ 1.06
CACNA2D3-201ENST00000288197 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
CACNA2D3-201ENST00000288197 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
CACNA2D3-201ENST00000288197 CUX1P39880 1505 aa21.66■■□□□ 1.06
CACNA2D3-201ENST00000288197 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
CACNA2D3-201ENST00000288197 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
CACNA2D3-201ENST00000288197 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.06
CACNA2D3-201ENST00000288197 MYT1LQ9UL68 1186 aa21.64■■□□□ 1.05
CACNA2D3-201ENST00000288197 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
CACNA2D3-201ENST00000288197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
CACNA2D3-201ENST00000288197 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
CACNA2D3-201ENST00000288197 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
CACNA2D3-201ENST00000288197 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
CACNA2D3-201ENST00000288197 UNC13AQ9UPW8 1703 aa21.58■■□□□ 1.04
CACNA2D3-201ENST00000288197 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
CACNA2D3-201ENST00000288197 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.04
CACNA2D3-201ENST00000288197 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
CACNA2D3-201ENST00000288197 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
CACNA2D3-201ENST00000288197 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
CACNA2D3-201ENST00000288197 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
CACNA2D3-201ENST00000288197 FGD6Q6ZV73 1430 aa21.53■■□□□ 1.04
CACNA2D3-201ENST00000288197 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
CACNA2D3-201ENST00000288197 PAK3O75914 559 aaPredicted RBP21.5■■□□□ 1.03
CACNA2D3-201ENST00000288197 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
CACNA2D3-201ENST00000288197 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
CACNA2D3-201ENST00000288197 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
CACNA2D3-201ENST00000288197 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
CACNA2D3-201ENST00000288197 PKD2Q13563 968 aa21.48■■□□□ 1.03
CACNA2D3-201ENST00000288197 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
CACNA2D3-201ENST00000288197 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
CACNA2D3-201ENST00000288197 NEFMP07197 916 aa21.46■■□□□ 1.03
CACNA2D3-201ENST00000288197 ARXQ96QS3 562 aa21.45■■□□□ 1.02
CACNA2D3-201ENST00000288197 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
CACNA2D3-201ENST00000288197 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
CACNA2D3-201ENST00000288197 KIF7Q2M1P5 1343 aa21.44■■□□□ 1.02
CACNA2D3-201ENST00000288197 NUDCQ9Y266 331 aa21.42■■□□□ 1.02
CACNA2D3-201ENST00000288197 ZBED9Q6R2W3 1325 aa21.41■■□□□ 1.02
CACNA2D3-201ENST00000288197 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
CACNA2D3-201ENST00000288197 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
CACNA2D3-201ENST00000288197 CFTRP13569 1480 aa21.4■■□□□ 1.02
CACNA2D3-201ENST00000288197 PLIN1O60240 522 aa21.4■■□□□ 1.02
CACNA2D3-201ENST00000288197 CCDC7Q96M83 1385 aa21.39■■□□□ 1.02
CACNA2D3-201ENST00000288197 AKNAQ7Z591 1439 aa21.39■■□□□ 1.01
CACNA2D3-201ENST00000288197 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
CACNA2D3-201ENST00000288197 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
CACNA2D3-201ENST00000288197 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
CACNA2D3-201ENST00000288197 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
CACNA2D3-201ENST00000288197 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
CACNA2D3-201ENST00000288197 IPO9Q96P70 1041 aaKnown RBP21.35■■□□□ 1.01
CACNA2D3-201ENST00000288197 RGS3P49796 1198 aa21.35■■□□□ 1.01
CACNA2D3-201ENST00000288197 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
CACNA2D3-201ENST00000288197 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms