RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
RAB11FIP1-201ENST00000287263 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
RAB11FIP1-201ENST00000287263 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
RAB11FIP1-201ENST00000287263 TULP1O00294 542 aaPredicted RBP19.27■□□□□ 0.68
RAB11FIP1-201ENST00000287263 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
RAB11FIP1-201ENST00000287263 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
RAB11FIP1-201ENST00000287263 DNTTIP2Q5QJE6 756 aaKnown RBP19.23■□□□□ 0.67
RAB11FIP1-201ENST00000287263 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
RAB11FIP1-201ENST00000287263 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
RAB11FIP1-201ENST00000287263 MIER1Q8N108 512 aa19.22■□□□□ 0.67
RAB11FIP1-201ENST00000287263 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
RAB11FIP1-201ENST00000287263 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.671e-7■■■□□ 14.9
RAB11FIP1-201ENST00000287263 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
RAB11FIP1-201ENST00000287263 ARID3AQ99856 593 aa19.21■□□□□ 0.67
RAB11FIP1-201ENST00000287263 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
RAB11FIP1-201ENST00000287263 TAOK2Q9UL54 1235 aa19.2■□□□□ 0.66
RAB11FIP1-201ENST00000287263 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
RAB11FIP1-201ENST00000287263 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
RAB11FIP1-201ENST00000287263 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
RAB11FIP1-201ENST00000287263 RRP7BPQ9NSQ0 103 aa19.15■□□□□ 0.66
RAB11FIP1-201ENST00000287263 PTMAP06454 111 aaKnown RBP19.14■□□□□ 0.65
RAB11FIP1-201ENST00000287263 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
RAB11FIP1-201ENST00000287263 LMOD2Q6P5Q4 547 aa19.12■□□□□ 0.65
RAB11FIP1-201ENST00000287263 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
RAB11FIP1-201ENST00000287263 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
RAB11FIP1-201ENST00000287263 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
RAB11FIP1-201ENST00000287263 DDRGK1Q96HY6 314 aa19.05■□□□□ 0.64
RAB11FIP1-201ENST00000287263 NOP58Q9Y2X3 529 aaKnown RBP19.05■□□□□ 0.64
RAB11FIP1-201ENST00000287263 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
RAB11FIP1-201ENST00000287263 MYH16Q9H6N6 1097 aa19■□□□□ 0.63
RAB11FIP1-201ENST00000287263 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
RAB11FIP1-201ENST00000287263 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
RAB11FIP1-201ENST00000287263 BECN1Q14457 450 aa18.97■□□□□ 0.63
RAB11FIP1-201ENST00000287263 NPHP1O15259 732 aa18.96■□□□□ 0.62
RAB11FIP1-201ENST00000287263 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
RAB11FIP1-201ENST00000287263 SOX12O15370 315 aa18.93■□□□□ 0.62
RAB11FIP1-201ENST00000287263 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
RAB11FIP1-201ENST00000287263 MLECQ14165 292 aa18.9■□□□□ 0.62
RAB11FIP1-201ENST00000287263 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
RAB11FIP1-201ENST00000287263 GOLGA6L22H0YM25 854 aa18.89■□□□□ 0.61
RAB11FIP1-201ENST00000287263 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
RAB11FIP1-201ENST00000287263 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
RAB11FIP1-201ENST00000287263 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
RAB11FIP1-201ENST00000287263 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
RAB11FIP1-201ENST00000287263 TNNT3P45378 269 aaPredicted RBP18.79■□□□□ 0.6
RAB11FIP1-201ENST00000287263 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
RAB11FIP1-201ENST00000287263 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
RAB11FIP1-201ENST00000287263 MSNP26038 577 aaKnown RBP18.77■□□□□ 0.6
RAB11FIP1-201ENST00000287263 POGKQ9P215 609 aa18.77■□□□□ 0.6
RAB11FIP1-201ENST00000287263 CC2D1BQ5T0F9 858 aaKnown RBP18.76■□□□□ 0.59
RAB11FIP1-201ENST00000287263 SPRYD3Q8NCJ5 442 aa18.76■□□□□ 0.59
RAB11FIP1-201ENST00000287263 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
RAB11FIP1-201ENST00000287263 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
RAB11FIP1-201ENST00000287263 FTSJ3Q8IY81 847 aaKnown RBP18.73■□□□□ 0.59
RAB11FIP1-201ENST00000287263 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
RAB11FIP1-201ENST00000287263 B4GALNT3Q6L9W6 998 aa18.73■□□□□ 0.59
RAB11FIP1-201ENST00000287263 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
RAB11FIP1-201ENST00000287263 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
RAB11FIP1-201ENST00000287263 RGS3P49796 1198 aa18.71■□□□□ 0.58
RAB11FIP1-201ENST00000287263 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
RAB11FIP1-201ENST00000287263 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
RAB11FIP1-201ENST00000287263 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
RAB11FIP1-201ENST00000287263 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
RAB11FIP1-201ENST00000287263 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
RAB11FIP1-201ENST00000287263 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
RAB11FIP1-201ENST00000287263 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
RAB11FIP1-201ENST00000287263 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
RAB11FIP1-201ENST00000287263 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
RAB11FIP1-201ENST00000287263 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
RAB11FIP1-201ENST00000287263 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
RAB11FIP1-201ENST00000287263 HSP90AA2PQ14568 343 aaPredicted RBP18.65■□□□□ 0.58
RAB11FIP1-201ENST00000287263 CLIP1P30622 1438 aa18.65■□□□□ 0.58
RAB11FIP1-201ENST00000287263 L1TD1Q5T7N2 865 aaKnown RBP18.64■□□□□ 0.57
RAB11FIP1-201ENST00000287263 ISY1Q9ULR0 285 aaKnown RBP18.64■□□□□ 0.57
RAB11FIP1-201ENST00000287263 CLSTN1O94985 981 aa18.64■□□□□ 0.57
RAB11FIP1-201ENST00000287263 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
RAB11FIP1-201ENST00000287263 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
RAB11FIP1-201ENST00000287263 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
RAB11FIP1-201ENST00000287263 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
RAB11FIP1-201ENST00000287263 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
RAB11FIP1-201ENST00000287263 STK26Q9P289 416 aa18.6■□□□□ 0.57
RAB11FIP1-201ENST00000287263 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP1-201ENST00000287263 CASC1Q6TDU7 716 aa18.58■□□□□ 0.57
RAB11FIP1-201ENST00000287263 FGD1P98174 961 aa18.57■□□□□ 0.56
RAB11FIP1-201ENST00000287263 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
RAB11FIP1-201ENST00000287263 APBB1O00213 710 aa18.55■□□□□ 0.56
RAB11FIP1-201ENST00000287263 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
RAB11FIP1-201ENST00000287263 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
RAB11FIP1-201ENST00000287263 KCNJ4P48050 445 aa18.54■□□□□ 0.56
RAB11FIP1-201ENST00000287263 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
RAB11FIP1-201ENST00000287263 DRC7Q8IY82 874 aa18.53■□□□□ 0.56
RAB11FIP1-201ENST00000287263 GGT6Q6P531 493 aa18.5■□□□□ 0.55
RAB11FIP1-201ENST00000287263 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
RAB11FIP1-201ENST00000287263 DCAF11Q8TEB1 546 aa18.49■□□□□ 0.55
RAB11FIP1-201ENST00000287263 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
RAB11FIP1-201ENST00000287263 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
RAB11FIP1-201ENST00000287263 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
RAB11FIP1-201ENST00000287263 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
RAB11FIP1-201ENST00000287263 PKNOX2Q96KN3 472 aa18.47■□□□□ 0.55
RAB11FIP1-201ENST00000287263 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms