RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
ZIC1-201ENST00000282928 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
ZIC1-201ENST00000282928 PPP1R15AO75807 674 aaPredicted RBP24.49■■□□□ 1.51
ZIC1-201ENST00000282928 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
ZIC1-201ENST00000282928 SOGA1O94964 1423 aa24.47■■□□□ 1.51
ZIC1-201ENST00000282928 HDGFP51858 240 aaKnown RBP24.46■■□□□ 1.51
ZIC1-201ENST00000282928 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
ZIC1-201ENST00000282928 KANK1Q14678 1352 aa24.45■■□□□ 1.51
ZIC1-201ENST00000282928 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
ZIC1-201ENST00000282928 FMN1Q68DA7 1419 aa24.41■■□□□ 1.5
ZIC1-201ENST00000282928 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.4■■□□□ 1.5
ZIC1-201ENST00000282928 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
ZIC1-201ENST00000282928 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
ZIC1-201ENST00000282928 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
ZIC1-201ENST00000282928 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
ZIC1-201ENST00000282928 WDR43Q15061 677 aaKnown RBP eCLIP24.33■■□□□ 1.49
ZIC1-201ENST00000282928 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
ZIC1-201ENST00000282928 TMC1Q8TDI8 760 aa24.28■■□□□ 1.48
ZIC1-201ENST00000282928 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
ZIC1-201ENST00000282928 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
ZIC1-201ENST00000282928 CFAP53Q96M91 514 aa24.23■■□□□ 1.47
ZIC1-201ENST00000282928 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
ZIC1-201ENST00000282928 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
ZIC1-201ENST00000282928 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.46
ZIC1-201ENST00000282928 RAPGEF2Q9Y4G8 1499 aa24.2■■□□□ 1.46
ZIC1-201ENST00000282928 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
ZIC1-201ENST00000282928 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
ZIC1-201ENST00000282928 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
ZIC1-201ENST00000282928 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
ZIC1-201ENST00000282928 UPF2Q9HAU5 1272 aaKnown RBP24.12■■□□□ 1.45
ZIC1-201ENST00000282928 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
ZIC1-201ENST00000282928 EIF5BO60841 1220 aaKnown RBP24.11■■□□□ 1.45
ZIC1-201ENST00000282928 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
ZIC1-201ENST00000282928 WIZO95785 1651 aa24.08■■□□□ 1.45
ZIC1-201ENST00000282928 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
ZIC1-201ENST00000282928 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
ZIC1-201ENST00000282928 PNNQ9H307 717 aaKnown RBP24.06■■□□□ 1.44
ZIC1-201ENST00000282928 CCDC18Q5T9S5 1454 aa24.05■■□□□ 1.44
ZIC1-201ENST00000282928 ANP32AP39687 249 aaKnown RBP24.04■■□□□ 1.44
ZIC1-201ENST00000282928 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.44
ZIC1-201ENST00000282928 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
ZIC1-201ENST00000282928 MRS2Q9HD23 443 aa24.02■■□□□ 1.44
ZIC1-201ENST00000282928 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
ZIC1-201ENST00000282928 MYH16Q9H6N6 1097 aa24.02■■□□□ 1.44
ZIC1-201ENST00000282928 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
ZIC1-201ENST00000282928 POGKQ9P215 609 aa24■■□□□ 1.43
ZIC1-201ENST00000282928 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
ZIC1-201ENST00000282928 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
ZIC1-201ENST00000282928 HAP1P54257 671 aaPredicted RBP23.97■■□□□ 1.43
ZIC1-201ENST00000282928 FAM9BQ8IZU0 186 aa23.95■■□□□ 1.43
ZIC1-201ENST00000282928 CHMP4BQ9H444 224 aaKnown RBP23.95■■□□□ 1.42
ZIC1-201ENST00000282928 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
ZIC1-201ENST00000282928 RGL3Q3MIN7 710 aa23.93■■□□□ 1.42
ZIC1-201ENST00000282928 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
ZIC1-201ENST00000282928 TMF1P82094 1093 aa23.89■■□□□ 1.42
ZIC1-201ENST00000282928 JPH4Q96JJ6 628 aa23.89■■□□□ 1.42
ZIC1-201ENST00000282928 GTF3C3Q9Y5Q9 886 aa23.88■■□□□ 1.41
ZIC1-201ENST00000282928 MS4A1P11836 297 aa23.84■■□□□ 1.41
ZIC1-201ENST00000282928 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
ZIC1-201ENST00000282928 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
ZIC1-201ENST00000282928 EIF3AQ14152 1382 aaKnown RBP23.8■■□□□ 1.4
ZIC1-201ENST00000282928 PTPRGP23470 1445 aa23.8■■□□□ 1.4
ZIC1-201ENST00000282928 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
ZIC1-201ENST00000282928 CHMP4AQ9BY43 222 aa23.78■■□□□ 1.4
ZIC1-201ENST00000282928 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
ZIC1-201ENST00000282928 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
ZIC1-201ENST00000282928 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
ZIC1-201ENST00000282928 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
ZIC1-201ENST00000282928 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
ZIC1-201ENST00000282928 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
ZIC1-201ENST00000282928 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
ZIC1-201ENST00000282928 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
ZIC1-201ENST00000282928 HDGFL2Q7Z4V5 671 aaPredicted RBP23.68■■□□□ 1.38
ZIC1-201ENST00000282928 GGT6Q6P531 493 aa23.68■■□□□ 1.38
ZIC1-201ENST00000282928 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
ZIC1-201ENST00000282928 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
ZIC1-201ENST00000282928 NUP155O75694 1391 aa23.66■■□□□ 1.38
ZIC1-201ENST00000282928 PKD2Q13563 968 aa23.65■■□□□ 1.38
ZIC1-201ENST00000282928 FKBP8Q14318 412 aa23.65■■□□□ 1.38
ZIC1-201ENST00000282928 GRIN2BQ13224 1484 aa23.64■■□□□ 1.37
ZIC1-201ENST00000282928 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
ZIC1-201ENST00000282928 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
ZIC1-201ENST00000282928 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
ZIC1-201ENST00000282928 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
ZIC1-201ENST00000282928 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
ZIC1-201ENST00000282928 CFTRP13569 1480 aa23.6■■□□□ 1.37
ZIC1-201ENST00000282928 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
ZIC1-201ENST00000282928 MLECQ14165 292 aa23.59■■□□□ 1.37
ZIC1-201ENST00000282928 A0A0G2JS52 829 aa23.57■■□□□ 1.36
ZIC1-201ENST00000282928 CASC1Q6TDU7 716 aa23.57■■□□□ 1.36
ZIC1-201ENST00000282928 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
ZIC1-201ENST00000282928 CUX1P39880 1505 aa23.56■■□□□ 1.36
ZIC1-201ENST00000282928 KIF3BO15066 747 aa23.56■■□□□ 1.36
ZIC1-201ENST00000282928 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
ZIC1-201ENST00000282928 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
ZIC1-201ENST00000282928 CFAP44Q96MT7 982 aa23.55■■□□□ 1.36
ZIC1-201ENST00000282928 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
ZIC1-201ENST00000282928 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
ZIC1-201ENST00000282928 IGF1RP08069 1367 aa23.52■■□□□ 1.36
ZIC1-201ENST00000282928 LMOD2Q6P5Q4 547 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms