RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 RTN4Q9NQC3 1192 aaKnown RBP19.52■□□□□ 0.72
VPS26B-201ENST00000281187 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
VPS26B-201ENST00000281187 MSH5O43196 834 aa19.51■□□□□ 0.71
VPS26B-201ENST00000281187 CCER2I3L3R5 266 aa19.51■□□□□ 0.71
VPS26B-201ENST00000281187 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
VPS26B-201ENST00000281187 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
VPS26B-201ENST00000281187 PPP4R2Q9NY27 417 aa19.47■□□□□ 0.71
VPS26B-201ENST00000281187 ZBTB47Q9UFB7 747 aaPredicted RBP19.46■□□□□ 0.71
VPS26B-201ENST00000281187 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
VPS26B-201ENST00000281187 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
VPS26B-201ENST00000281187 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
VPS26B-201ENST00000281187 NOP58Q9Y2X3 529 aaKnown RBP19.44■□□□□ 0.7
VPS26B-201ENST00000281187 SALL2Q9Y467 1007 aaPredicted RBP19.43■□□□□ 0.7
VPS26B-201ENST00000281187 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
VPS26B-201ENST00000281187 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
VPS26B-201ENST00000281187 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
VPS26B-201ENST00000281187 KIF21BO75037 1637 aa19.41■□□□□ 0.7
VPS26B-201ENST00000281187 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
VPS26B-201ENST00000281187 RRP7BPQ9NSQ0 103 aa19.36■□□□□ 0.69
VPS26B-201ENST00000281187 FANCIQ9NVI1 1328 aa19.35■□□□□ 0.69
VPS26B-201ENST00000281187 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
VPS26B-201ENST00000281187 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.69
VPS26B-201ENST00000281187 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
VPS26B-201ENST00000281187 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
VPS26B-201ENST00000281187 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
VPS26B-201ENST00000281187 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
VPS26B-201ENST00000281187 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
VPS26B-201ENST00000281187 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
VPS26B-201ENST00000281187 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
VPS26B-201ENST00000281187 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
VPS26B-201ENST00000281187 MTUS2Q5JR59 1369 aa19.23■□□□□ 0.67
VPS26B-201ENST00000281187 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.22■□□□□ 0.67
VPS26B-201ENST00000281187 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
VPS26B-201ENST00000281187 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
VPS26B-201ENST00000281187 FOXD1Q16676 465 aa19.2■□□□□ 0.66
VPS26B-201ENST00000281187 NEFMP07197 916 aa19.19■□□□□ 0.66
VPS26B-201ENST00000281187 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
VPS26B-201ENST00000281187 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
VPS26B-201ENST00000281187 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
VPS26B-201ENST00000281187 CCDC184Q52MB2 194 aa19.16■□□□□ 0.66
VPS26B-201ENST00000281187 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
VPS26B-201ENST00000281187 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
VPS26B-201ENST00000281187 ERICH6BQ5W0A0 696 aa19.1■□□□□ 0.65
VPS26B-201ENST00000281187 IPO9Q96P70 1041 aaKnown RBP19.1■□□□□ 0.65
VPS26B-201ENST00000281187 CUX2O14529 1486 aa19.06■□□□□ 0.64
VPS26B-201ENST00000281187 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
VPS26B-201ENST00000281187 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
VPS26B-201ENST00000281187 WASHC2AQ641Q2 1341 aa19.05■□□□□ 0.64
VPS26B-201ENST00000281187 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
VPS26B-201ENST00000281187 ARXQ96QS3 562 aa19.04■□□□□ 0.64
VPS26B-201ENST00000281187 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
VPS26B-201ENST00000281187 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
VPS26B-201ENST00000281187 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
VPS26B-201ENST00000281187 KDM2AQ9Y2K7 1162 aa19.02■□□□□ 0.63
VPS26B-201ENST00000281187 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
VPS26B-201ENST00000281187 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
VPS26B-201ENST00000281187 FHOD3Q2V2M9 1422 aa18.99■□□□□ 0.63
VPS26B-201ENST00000281187 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
VPS26B-201ENST00000281187 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
VPS26B-201ENST00000281187 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
VPS26B-201ENST00000281187 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
VPS26B-201ENST00000281187 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
VPS26B-201ENST00000281187 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
VPS26B-201ENST00000281187 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
VPS26B-201ENST00000281187 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
VPS26B-201ENST00000281187 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
VPS26B-201ENST00000281187 SLC4A3P48751 1232 aa18.9■□□□□ 0.62
VPS26B-201ENST00000281187 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
VPS26B-201ENST00000281187 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
VPS26B-201ENST00000281187 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
VPS26B-201ENST00000281187 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
VPS26B-201ENST00000281187 IGF1RP08069 1367 aa18.84■□□□□ 0.61
VPS26B-201ENST00000281187 PDE4AP27815 886 aa18.84■□□□□ 0.61
VPS26B-201ENST00000281187 RGS3P49796 1198 aa18.84■□□□□ 0.61
VPS26B-201ENST00000281187 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
VPS26B-201ENST00000281187 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
VPS26B-201ENST00000281187 PLIN1O60240 522 aa18.81■□□□□ 0.6
VPS26B-201ENST00000281187 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
VPS26B-201ENST00000281187 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
VPS26B-201ENST00000281187 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
VPS26B-201ENST00000281187 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
VPS26B-201ENST00000281187 CNTLNQ9NXG0 1405 aa18.8■□□□□ 0.6
VPS26B-201ENST00000281187 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
VPS26B-201ENST00000281187 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
VPS26B-201ENST00000281187 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
VPS26B-201ENST00000281187 TIAM1Q13009 1591 aa18.77■□□□□ 0.59
VPS26B-201ENST00000281187 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
VPS26B-201ENST00000281187 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
VPS26B-201ENST00000281187 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
VPS26B-201ENST00000281187 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
VPS26B-201ENST00000281187 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
VPS26B-201ENST00000281187 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
VPS26B-201ENST00000281187 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
VPS26B-201ENST00000281187 RRP1P56182 461 aaKnown RBP18.72■□□□□ 0.59
VPS26B-201ENST00000281187 GSE1Q14687 1217 aa18.69■□□□□ 0.58
VPS26B-201ENST00000281187 CUX1P39880 1505 aa18.67■□□□□ 0.58
VPS26B-201ENST00000281187 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
VPS26B-201ENST00000281187 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
VPS26B-201ENST00000281187 PKD2Q13563 968 aa18.64■□□□□ 0.57
VPS26B-201ENST00000281187 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms