RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
MRPL49-201ENST00000279242 EFCAB5A4FU69 1503 aa23.04■■□□□ 1.28
MRPL49-201ENST00000279242 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
MRPL49-201ENST00000279242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.03■■□□□ 1.285e-6■■■■■ 46.2
MRPL49-201ENST00000279242 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
MRPL49-201ENST00000279242 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.28
MRPL49-201ENST00000279242 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
MRPL49-201ENST00000279242 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
MRPL49-201ENST00000279242 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
MRPL49-201ENST00000279242 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
MRPL49-201ENST00000279242 CUL7Q14999 1698 aa22.98■■□□□ 1.27
MRPL49-201ENST00000279242 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
MRPL49-201ENST00000279242 PCF11O94913 1555 aaKnown RBP22.96■■□□□ 1.27
MRPL49-201ENST00000279242 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
MRPL49-201ENST00000279242 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
MRPL49-201ENST00000279242 ITGAEP38570 1179 aa22.9■■□□□ 1.26
MRPL49-201ENST00000279242 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.25
MRPL49-201ENST00000279242 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
MRPL49-201ENST00000279242 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
MRPL49-201ENST00000279242 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
MRPL49-201ENST00000279242 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
MRPL49-201ENST00000279242 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
MRPL49-201ENST00000279242 SUPT16HQ9Y5B9 1047 aaKnown RBP22.78■■□□□ 1.24
MRPL49-201ENST00000279242 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
MRPL49-201ENST00000279242 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
MRPL49-201ENST00000279242 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
MRPL49-201ENST00000279242 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
MRPL49-201ENST00000279242 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
MRPL49-201ENST00000279242 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
MRPL49-201ENST00000279242 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
MRPL49-201ENST00000279242 PPP1R15AO75807 674 aaPredicted RBP22.69■■□□□ 1.22
MRPL49-201ENST00000279242 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
MRPL49-201ENST00000279242 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
MRPL49-201ENST00000279242 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
MRPL49-201ENST00000279242 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
MRPL49-201ENST00000279242 SIN3AQ96ST3 1273 aa22.65■■□□□ 1.22
MRPL49-201ENST00000279242 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
MRPL49-201ENST00000279242 CCER2I3L3R5 266 aa22.65■■□□□ 1.22
MRPL49-201ENST00000279242 ATP1B4Q9UN42 357 aaPredicted RBP22.64■■□□□ 1.22
MRPL49-201ENST00000279242 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
MRPL49-201ENST00000279242 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
MRPL49-201ENST00000279242 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
MRPL49-201ENST00000279242 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
MRPL49-201ENST00000279242 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
MRPL49-201ENST00000279242 PTPN23Q9H3S7 1636 aa22.6■■□□□ 1.21
MRPL49-201ENST00000279242 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
MRPL49-201ENST00000279242 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
MRPL49-201ENST00000279242 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.2
MRPL49-201ENST00000279242 NESP48681 1621 aa22.58■■□□□ 1.2
MRPL49-201ENST00000279242 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
MRPL49-201ENST00000279242 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
MRPL49-201ENST00000279242 NCOA2Q15596 1464 aa22.56■■□□□ 1.2
MRPL49-201ENST00000279242 LRRIQ1Q96JM4 1722 aa22.55■■□□□ 1.2
MRPL49-201ENST00000279242 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
MRPL49-201ENST00000279242 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
MRPL49-201ENST00000279242 NAIPQ13075 1403 aa22.52■■□□□ 1.2
MRPL49-201ENST00000279242 ANP32CO43423 234 aa22.52■■□□□ 1.19
MRPL49-201ENST00000279242 UGGT2Q9NYU1 1516 aa22.51■■□□□ 1.19
MRPL49-201ENST00000279242 PTPRKQ15262 1439 aa22.49■■□□□ 1.19
MRPL49-201ENST00000279242 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
MRPL49-201ENST00000279242 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
MRPL49-201ENST00000279242 TCOF1Q13428 1488 aaKnown RBP22.48■■□□□ 1.19
MRPL49-201ENST00000279242 GCC2Q8IWJ2 1684 aa22.45■■□□□ 1.18
MRPL49-201ENST00000279242 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
MRPL49-201ENST00000279242 HECW1Q76N89 1606 aa22.44■■□□□ 1.18
MRPL49-201ENST00000279242 TSHZ2Q9NRE2 1034 aa22.41■■□□□ 1.18
MRPL49-201ENST00000279242 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
MRPL49-201ENST00000279242 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
MRPL49-201ENST00000279242 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
MRPL49-201ENST00000279242 NEFLP07196 543 aa22.37■■□□□ 1.17
MRPL49-201ENST00000279242 IQGAP2Q13576 1575 aa22.34■■□□□ 1.17
MRPL49-201ENST00000279242 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
MRPL49-201ENST00000279242 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
MRPL49-201ENST00000279242 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
MRPL49-201ENST00000279242 FKBP8Q14318 412 aa22.31■■□□□ 1.16
MRPL49-201ENST00000279242 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
MRPL49-201ENST00000279242 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
MRPL49-201ENST00000279242 WDR62O43379 1518 aa22.26■■□□□ 1.15
MRPL49-201ENST00000279242 ROCK1Q13464 1354 aa22.24■■□□□ 1.15
MRPL49-201ENST00000279242 DENND4BO75064 1496 aaPredicted RBP22.23■■□□□ 1.15
MRPL49-201ENST00000279242 EIF4G2P78344 907 aaKnown RBP eCLIP22.19■■□□□ 1.14
MRPL49-201ENST00000279242 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
MRPL49-201ENST00000279242 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
MRPL49-201ENST00000279242 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
MRPL49-201ENST00000279242 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
MRPL49-201ENST00000279242 DNMT1P26358 1616 aaKnown RBP22.15■■□□□ 1.14
MRPL49-201ENST00000279242 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
MRPL49-201ENST00000279242 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.14
MRPL49-201ENST00000279242 ERICH6BQ5W0A0 696 aa22.14■■□□□ 1.14
MRPL49-201ENST00000279242 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
MRPL49-201ENST00000279242 KDM6BO15054 1643 aa22.14■■□□□ 1.13
MRPL49-201ENST00000279242 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
MRPL49-201ENST00000279242 BCANQ96GW7 911 aa22.13■■□□□ 1.13
MRPL49-201ENST00000279242 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
MRPL49-201ENST00000279242 RPRD2Q5VT52 1461 aaKnown RBP22.12■■□□□ 1.13
MRPL49-201ENST00000279242 DAPK1P53355 1430 aa22.12■■□□□ 1.13
MRPL49-201ENST00000279242 KIAA0586Q9BVV6 1533 aa22.11■■□□□ 1.13
MRPL49-201ENST00000279242 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
MRPL49-201ENST00000279242 NCOA1Q15788 1441 aa22.1■■□□□ 1.13
MRPL49-201ENST00000279242 ANKRD30BQ9BXX2 1392 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms