RNA–Protein interactions for RNA: ENST00000273063.10

SLC4A3-201, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC4A3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-201ENST00000273063 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
SLC4A3-201ENST00000273063 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
SLC4A3-201ENST00000273063 EIF4G2P78344 907 aaKnown RBP eCLIP22.26■■□□□ 1.15
SLC4A3-201ENST00000273063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
SLC4A3-201ENST00000273063 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
SLC4A3-201ENST00000273063 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
SLC4A3-201ENST00000273063 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
SLC4A3-201ENST00000273063 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
SLC4A3-201ENST00000273063 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
SLC4A3-201ENST00000273063 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
SLC4A3-201ENST00000273063 TMC1Q8TDI8 760 aa22.17■■□□□ 1.14
SLC4A3-201ENST00000273063 SENP3-EIF4A1A0A087X0R7 540 aa22.16■■□□□ 1.14
SLC4A3-201ENST00000273063 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
SLC4A3-201ENST00000273063 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
SLC4A3-201ENST00000273063 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.12
SLC4A3-201ENST00000273063 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
SLC4A3-201ENST00000273063 NPM2Q86SE8 214 aaKnown RBP22.07■■□□□ 1.12
SLC4A3-201ENST00000273063 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
SLC4A3-201ENST00000273063 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
SLC4A3-201ENST00000273063 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
SLC4A3-201ENST00000273063 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
SLC4A3-201ENST00000273063 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.12
SLC4A3-201ENST00000273063 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
SLC4A3-201ENST00000273063 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
SLC4A3-201ENST00000273063 ANP32AP39687 249 aaKnown RBP22.01■■□□□ 1.11
SLC4A3-201ENST00000273063 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
SLC4A3-201ENST00000273063 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
SLC4A3-201ENST00000273063 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
SLC4A3-201ENST00000273063 BCL11AQ9H165 835 aa21.95■■□□□ 1.1
SLC4A3-201ENST00000273063 FOXD1Q16676 465 aa21.94■■□□□ 1.1
SLC4A3-201ENST00000273063 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
SLC4A3-201ENST00000273063 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
SLC4A3-201ENST00000273063 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
SLC4A3-201ENST00000273063 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
SLC4A3-201ENST00000273063 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
SLC4A3-201ENST00000273063 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
SLC4A3-201ENST00000273063 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
SLC4A3-201ENST00000273063 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
SLC4A3-201ENST00000273063 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
SLC4A3-201ENST00000273063 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
SLC4A3-201ENST00000273063 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
SLC4A3-201ENST00000273063 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
SLC4A3-201ENST00000273063 NBR1Q14596 966 aa21.76■■□□□ 1.07
SLC4A3-201ENST00000273063 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
SLC4A3-201ENST00000273063 NEFMP07197 916 aa21.75■■□□□ 1.07
SLC4A3-201ENST00000273063 IGF1RP08069 1367 aa21.75■■□□□ 1.07
SLC4A3-201ENST00000273063 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
SLC4A3-201ENST00000273063 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
SLC4A3-201ENST00000273063 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
SLC4A3-201ENST00000273063 DCAF11Q8TEB1 546 aa21.72■■□□□ 1.07
SLC4A3-201ENST00000273063 STAG3Q9UJ98 1225 aa21.71■■□□□ 1.07
SLC4A3-201ENST00000273063 KIF21BO75037 1637 aa21.7■■□□□ 1.06
SLC4A3-201ENST00000273063 PKD2Q13563 968 aa21.69■■□□□ 1.06
SLC4A3-201ENST00000273063 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
SLC4A3-201ENST00000273063 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
SLC4A3-201ENST00000273063 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
SLC4A3-201ENST00000273063 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
SLC4A3-201ENST00000273063 SLC24A1O60721 1099 aa21.67■■□□□ 1.06
SLC4A3-201ENST00000273063 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
SLC4A3-201ENST00000273063 PPP4R2Q9NY27 417 aa21.63■■□□□ 1.05
SLC4A3-201ENST00000273063 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
SLC4A3-201ENST00000273063 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
SLC4A3-201ENST00000273063 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
SLC4A3-201ENST00000273063 KNSTRNQ9Y448 316 aa21.6■■□□□ 1.05
SLC4A3-201ENST00000273063 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
SLC4A3-201ENST00000273063 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
SLC4A3-201ENST00000273063 ANP32EQ9BTT0 268 aa21.58■■□□□ 1.05
SLC4A3-201ENST00000273063 ESF1Q9H501 851 aaKnown RBP21.58■■□□□ 1.04
SLC4A3-201ENST00000273063 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
SLC4A3-201ENST00000273063 PHLDB1Q86UU1 1377 aa21.57■■□□□ 1.04
SLC4A3-201ENST00000273063 NUP155O75694 1391 aa21.53■■□□□ 1.04
SLC4A3-201ENST00000273063 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
SLC4A3-201ENST00000273063 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
SLC4A3-201ENST00000273063 NEUROD2Q15784 382 aa21.49■■□□□ 1.03
SLC4A3-201ENST00000273063 CDCA8Q53HL2 280 aa21.47■■□□□ 1.03
SLC4A3-201ENST00000273063 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
SLC4A3-201ENST00000273063 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
SLC4A3-201ENST00000273063 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
SLC4A3-201ENST00000273063 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.02
SLC4A3-201ENST00000273063 PRXQ9BXM0 1461 aa21.45■■□□□ 1.02
SLC4A3-201ENST00000273063 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
SLC4A3-201ENST00000273063 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
SLC4A3-201ENST00000273063 LRRC9Q6ZRR7 1453 aa21.43■■□□□ 1.02
SLC4A3-201ENST00000273063 TMF1P82094 1093 aa21.43■■□□□ 1.02
SLC4A3-201ENST00000273063 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
SLC4A3-201ENST00000273063 CFTRP13569 1480 aa21.41■■□□□ 1.02
SLC4A3-201ENST00000273063 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
SLC4A3-201ENST00000273063 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.01
SLC4A3-201ENST00000273063 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
SLC4A3-201ENST00000273063 ZNF644Q9H582 1327 aaPredicted RBP21.37■■□□□ 1.01
SLC4A3-201ENST00000273063 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
SLC4A3-201ENST00000273063 HSP90AA1P07900 732 aaKnown RBP21.36■■□□□ 1.01
SLC4A3-201ENST00000273063 CUX1P39880 1505 aa21.36■■□□□ 1.01
SLC4A3-201ENST00000273063 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
SLC4A3-201ENST00000273063 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
SLC4A3-201ENST00000273063 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
SLC4A3-201ENST00000273063 RGS3P49796 1198 aa21.34■■□□□ 1.01
SLC4A3-201ENST00000273063 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1
SLC4A3-201ENST00000273063 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
SLC4A3-201ENST00000273063 ARXQ96QS3 562 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms