RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 MAPKBP1O60336 1514 aa30.52■■■□□ 2.48
CAPN10-201ENST00000270361 SUPT16HQ9Y5B9 1047 aaKnown RBP30.49■■■□□ 2.47
CAPN10-201ENST00000270361 PHLDB1Q86UU1 1377 aa30.43■■■□□ 2.46
CAPN10-201ENST00000270361 CFAP43Q8NDM7 1665 aa30.42■■■□□ 2.46
CAPN10-201ENST00000270361 TIMELESSQ9UNS1 1208 aa30.41■■■□□ 2.46
CAPN10-201ENST00000270361 PCF11O94913 1555 aaKnown RBP30.34■■■□□ 2.45
CAPN10-201ENST00000270361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.34■■■□□ 2.45
CAPN10-201ENST00000270361 FAM50AQ14320 339 aaKnown RBP30.34■■■□□ 2.45
CAPN10-201ENST00000270361 EFCAB5A4FU69 1503 aa30.32■■■□□ 2.44
CAPN10-201ENST00000270361 FYCO1Q9BQS8 1478 aa30.32■■■□□ 2.44
CAPN10-201ENST00000270361 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.445e-8■■■■■ 30.3
CAPN10-201ENST00000270361 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
CAPN10-201ENST00000270361 CASKIN1Q8WXD9 1431 aa30.26■■■□□ 2.43
CAPN10-201ENST00000270361 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
CAPN10-201ENST00000270361 DNMBPQ6XZF7 1577 aa30.23■■■□□ 2.43
CAPN10-201ENST00000270361 WDR97A6NE52 1622 aa30.23■■■□□ 2.43
CAPN10-201ENST00000270361 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
CAPN10-201ENST00000270361 FHOD3Q2V2M9 1422 aa30.2■■■□□ 2.42
CAPN10-201ENST00000270361 P3H3Q8IVL6 736 aa30.19■■■□□ 2.42
CAPN10-201ENST00000270361 SIN3AQ96ST3 1273 aa30.19■■■□□ 2.42
CAPN10-201ENST00000270361 ATP1B4Q9UN42 357 aaPredicted RBP30.18■■■□□ 2.42
CAPN10-201ENST00000270361 CUL7Q14999 1698 aa30.18■■■□□ 2.42
CAPN10-201ENST00000270361 FMN1Q68DA7 1419 aa30.15■■■□□ 2.42
CAPN10-201ENST00000270361 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
CAPN10-201ENST00000270361 DDX10Q13206 875 aaKnown RBP30.12■■■□□ 2.41
CAPN10-201ENST00000270361 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
CAPN10-201ENST00000270361 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
CAPN10-201ENST00000270361 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
CAPN10-201ENST00000270361 KCNH8Q96L42 1107 aa30.09■■■□□ 2.41
CAPN10-201ENST00000270361 TSHZ2Q9NRE2 1034 aa30.09■■■□□ 2.41
CAPN10-201ENST00000270361 CTTNBP2Q8WZ74 1663 aa30.08■■■□□ 2.41
CAPN10-201ENST00000270361 FGD6Q6ZV73 1430 aa30.08■■■□□ 2.41
CAPN10-201ENST00000270361 CCER2I3L3R5 266 aa30.03■■■□□ 2.4
CAPN10-201ENST00000270361 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
CAPN10-201ENST00000270361 MTUS2Q5JR59 1369 aa29.98■■■□□ 2.39
CAPN10-201ENST00000270361 HFM1A2PYH4 1435 aa29.98■■■□□ 2.39
CAPN10-201ENST00000270361 TONSLQ96HA7 1378 aa29.97■■■□□ 2.39
CAPN10-201ENST00000270361 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
CAPN10-201ENST00000270361 ANP32CO43423 234 aa29.96■■■□□ 2.39
CAPN10-201ENST00000270361 UACAQ9BZF9 1416 aa29.96■■■□□ 2.39
CAPN10-201ENST00000270361 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
CAPN10-201ENST00000270361 SAMD9Q5K651 1589 aa29.89■■■□□ 2.38
CAPN10-201ENST00000270361 PTPN23Q9H3S7 1636 aa29.87■■■□□ 2.37
CAPN10-201ENST00000270361 MYOM3Q5VTT5 1437 aa29.86■■■□□ 2.37
CAPN10-201ENST00000270361 FKBP8Q14318 412 aa29.84■■■□□ 2.37
CAPN10-201ENST00000270361 NCOA2Q15596 1464 aa29.84■■■□□ 2.37
CAPN10-201ENST00000270361 NEFLP07196 543 aa29.83■■■□□ 2.37
CAPN10-201ENST00000270361 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
CAPN10-201ENST00000270361 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
CAPN10-201ENST00000270361 NESP48681 1621 aa29.83■■■□□ 2.37
CAPN10-201ENST00000270361 NAIPQ13075 1403 aa29.82■■■□□ 2.36
CAPN10-201ENST00000270361 LAMC3Q9Y6N6 1575 aa29.81■■■□□ 2.36
CAPN10-201ENST00000270361 EHBP1L1Q8N3D4 1523 aa29.8■■■□□ 2.36
CAPN10-201ENST00000270361 HIRIP3Q9BW71 556 aaPredicted RBP29.8■■■□□ 2.36
CAPN10-201ENST00000270361 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
CAPN10-201ENST00000270361 SUPT6HQ7KZ85 1726 aaKnown RBP29.79■■■□□ 2.36
CAPN10-201ENST00000270361 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
CAPN10-201ENST00000270361 ANP32EQ9BTT0 268 aa29.78■■■□□ 2.36
CAPN10-201ENST00000270361 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.36
CAPN10-201ENST00000270361 BCANQ96GW7 911 aa29.75■■■□□ 2.35
CAPN10-201ENST00000270361 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
CAPN10-201ENST00000270361 TDRD9Q8NDG6 1382 aaKnown RBP29.72■■■□□ 2.35
CAPN10-201ENST00000270361 LRRIQ1Q96JM4 1722 aa29.71■■■□□ 2.35
CAPN10-201ENST00000270361 UGGT2Q9NYU1 1516 aa29.7■■■□□ 2.34
CAPN10-201ENST00000270361 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
CAPN10-201ENST00000270361 TRIM52Q96A61 297 aa29.68■■■□□ 2.34
CAPN10-201ENST00000270361 TCOF1Q13428 1488 aaKnown RBP29.64■■■□□ 2.34
CAPN10-201ENST00000270361 AKNAQ7Z591 1439 aa29.64■■■□□ 2.34
CAPN10-201ENST00000270361 PDS5BQ9NTI5 1447 aa29.64■■■□□ 2.34
CAPN10-201ENST00000270361 KDM5BQ9UGL1 1544 aa29.62■■■□□ 2.33
CAPN10-201ENST00000270361 GCC2Q8IWJ2 1684 aa29.57■■■□□ 2.32
CAPN10-201ENST00000270361 HECW1Q76N89 1606 aa29.56■■■□□ 2.32
CAPN10-201ENST00000270361 MAGI3Q5TCQ9 1506 aa29.53■■■□□ 2.32
CAPN10-201ENST00000270361 MIA2Q96PC5 1412 aa29.53■■■□□ 2.32
CAPN10-201ENST00000270361 RRP7BPQ9NSQ0 103 aa29.5■■■□□ 2.31
CAPN10-201ENST00000270361 RBM19Q9Y4C8 960 aaKnown RBP29.49■■■□□ 2.31
CAPN10-201ENST00000270361 EPRSP07814 1512 aaKnown RBP29.46■■■□□ 2.31
CAPN10-201ENST00000270361 EIF4G2P78344 907 aaKnown RBP eCLIP29.46■■■□□ 2.31
CAPN10-201ENST00000270361 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
CAPN10-201ENST00000270361 HSPA5P11021 654 aaKnown RBP29.46■■■□□ 2.31
CAPN10-201ENST00000270361 WASHC2AQ641Q2 1341 aa29.45■■■□□ 2.3
CAPN10-201ENST00000270361 DENND4BO75064 1496 aaPredicted RBP29.44■■■□□ 2.3
CAPN10-201ENST00000270361 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
CAPN10-201ENST00000270361 IQGAP2Q13576 1575 aa29.43■■■□□ 2.3
CAPN10-201ENST00000270361 HNRNPUQ00839 825 aaKnown RBP eCLIP29.43■■■□□ 2.3
CAPN10-201ENST00000270361 MPHOSPH9Q99550 1183 aa29.4■■■□□ 2.3
CAPN10-201ENST00000270361 CNTLNQ9NXG0 1405 aa29.36■■■□□ 2.29
CAPN10-201ENST00000270361 ROCK1Q13464 1354 aa29.34■■■□□ 2.29
CAPN10-201ENST00000270361 WDR62O43379 1518 aa29.34■■■□□ 2.29
CAPN10-201ENST00000270361 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
CAPN10-201ENST00000270361 ERICH6BQ5W0A0 696 aa29.33■■■□□ 2.29
CAPN10-201ENST00000270361 KDM6BO15054 1643 aa29.32■■■□□ 2.28
CAPN10-201ENST00000270361 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
CAPN10-201ENST00000270361 L3MBTL2Q969R5 705 aa29.31■■■□□ 2.28
CAPN10-201ENST00000270361 CDK13Q14004 1512 aaKnown RBP29.3■■■□□ 2.28
CAPN10-201ENST00000270361 NCOA1Q15788 1441 aa29.29■■■□□ 2.28
CAPN10-201ENST00000270361 RPRD2Q5VT52 1461 aaKnown RBP29.26■■■□□ 2.27
CAPN10-201ENST00000270361 CCDC7Q96M83 1385 aa29.25■■■□□ 2.27
CAPN10-201ENST00000270361 DAPK1P53355 1430 aa29.25■■■□□ 2.27
CAPN10-201ENST00000270361 ANKRD30BQ9BXX2 1392 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms