RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
GAPVD1-201ENST00000265956 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
GAPVD1-201ENST00000265956 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.66
GAPVD1-201ENST00000265956 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
GAPVD1-201ENST00000265956 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-201ENST00000265956 TIAM1Q13009 1591 aa10.88□□□□□ -0.67
GAPVD1-201ENST00000265956 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
GAPVD1-201ENST00000265956 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
GAPVD1-201ENST00000265956 TDRD9Q8NDG6 1382 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-201ENST00000265956 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
GAPVD1-201ENST00000265956 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
GAPVD1-201ENST00000265956 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-201ENST00000265956 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
GAPVD1-201ENST00000265956 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
GAPVD1-201ENST00000265956 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-201ENST00000265956 ARID3CA6NKF2 412 aa10.83□□□□□ -0.68
GAPVD1-201ENST00000265956 DDX10Q13206 875 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-201ENST00000265956 MAPKBP1O60336 1514 aa10.81□□□□□ -0.68
GAPVD1-201ENST00000265956 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
GAPVD1-201ENST00000265956 ABCA10Q8WWZ4 1543 aa10.79□□□□□ -0.68
GAPVD1-201ENST00000265956 MTUS2Q5JR59 1369 aa10.78□□□□□ -0.68
GAPVD1-201ENST00000265956 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
GAPVD1-201ENST00000265956 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-201ENST00000265956 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
GAPVD1-201ENST00000265956 CHIC2Q9UKJ5 165 aa10.76□□□□□ -0.69
GAPVD1-201ENST00000265956 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
GAPVD1-201ENST00000265956 FYCO1Q9BQS8 1478 aa10.73□□□□□ -0.69
GAPVD1-201ENST00000265956 RRP7BPQ9NSQ0 103 aa10.73□□□□□ -0.69
GAPVD1-201ENST00000265956 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
GAPVD1-201ENST00000265956 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
GAPVD1-201ENST00000265956 GAPVD1Q14C86 1478 aa10.72□□□□□ -0.69
GAPVD1-201ENST00000265956 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-201ENST00000265956 FGD6Q6ZV73 1430 aa10.71□□□□□ -0.69
GAPVD1-201ENST00000265956 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-201ENST00000265956 BCANQ96GW7 911 aa10.71□□□□□ -0.7
GAPVD1-201ENST00000265956 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
GAPVD1-201ENST00000265956 EFCAB5A4FU69 1503 aa10.7□□□□□ -0.7
GAPVD1-201ENST00000265956 TONSLQ96HA7 1378 aa10.7□□□□□ -0.7
GAPVD1-201ENST00000265956 CUL7Q14999 1698 aa10.69□□□□□ -0.7
GAPVD1-201ENST00000265956 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
GAPVD1-201ENST00000265956 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
GAPVD1-201ENST00000265956 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
GAPVD1-201ENST00000265956 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
GAPVD1-201ENST00000265956 CCDC18Q5T9S5 1454 aa10.67□□□□□ -0.7
GAPVD1-201ENST00000265956 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.71e-6■■□□□ 12.3
GAPVD1-201ENST00000265956 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
GAPVD1-201ENST00000265956 LAMC3Q9Y6N6 1575 aa10.66□□□□□ -0.7
GAPVD1-201ENST00000265956 FOXD1Q16676 465 aa10.65□□□□□ -0.7
GAPVD1-201ENST00000265956 ANP32CO43423 234 aa10.64□□□□□ -0.71
GAPVD1-201ENST00000265956 MYOM3Q5VTT5 1437 aa10.63□□□□□ -0.71
GAPVD1-201ENST00000265956 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
GAPVD1-201ENST00000265956 KIF21AQ7Z4S6 1674 aa10.62□□□□□ -0.71
GAPVD1-201ENST00000265956 LRRIQ1Q96JM4 1722 aa10.62□□□□□ -0.71
GAPVD1-201ENST00000265956 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
GAPVD1-201ENST00000265956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
GAPVD1-201ENST00000265956 NAIPQ13075 1403 aa10.61□□□□□ -0.71
GAPVD1-201ENST00000265956 FKBP8Q14318 412 aa10.61□□□□□ -0.71
GAPVD1-201ENST00000265956 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
GAPVD1-201ENST00000265956 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
GAPVD1-201ENST00000265956 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
GAPVD1-201ENST00000265956 MAGI3Q5TCQ9 1506 aa10.6□□□□□ -0.71
GAPVD1-201ENST00000265956 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
GAPVD1-201ENST00000265956 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
GAPVD1-201ENST00000265956 FBLN2P98095 1184 aa10.59□□□□□ -0.71
GAPVD1-201ENST00000265956 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-201ENST00000265956 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-201ENST00000265956 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
GAPVD1-201ENST00000265956 CNGB1Q14028 1251 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-201ENST00000265956 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-201ENST00000265956 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-201ENST00000265956 UGGT2Q9NYU1 1516 aa10.54□□□□□ -0.72
GAPVD1-201ENST00000265956 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
GAPVD1-201ENST00000265956 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
GAPVD1-201ENST00000265956 IQGAP2Q13576 1575 aa10.53□□□□□ -0.72
GAPVD1-201ENST00000265956 NEFLP07196 543 aa10.52□□□□□ -0.72
GAPVD1-201ENST00000265956 KDM6BO15054 1643 aa10.52□□□□□ -0.73
GAPVD1-201ENST00000265956 CCER2I3L3R5 266 aa10.52□□□□□ -0.73
GAPVD1-201ENST00000265956 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.73
GAPVD1-201ENST00000265956 THOC2Q8NI27 1593 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-201ENST00000265956 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
GAPVD1-201ENST00000265956 IRX6P78412 446 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-201ENST00000265956 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-201ENST00000265956 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
GAPVD1-201ENST00000265956 EIF4G2P78344 907 aaKnown RBP eCLIP10.5□□□□□ -0.73
GAPVD1-201ENST00000265956 ZNF326Q5BKZ1 582 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-201ENST00000265956 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
GAPVD1-201ENST00000265956 HECW1Q76N89 1606 aa10.49□□□□□ -0.73
GAPVD1-201ENST00000265956 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
GAPVD1-201ENST00000265956 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
GAPVD1-201ENST00000265956 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
GAPVD1-201ENST00000265956 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
GAPVD1-201ENST00000265956 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
GAPVD1-201ENST00000265956 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
GAPVD1-201ENST00000265956 ARHGEF11O15085 1522 aa10.47□□□□□ -0.73
GAPVD1-201ENST00000265956 NBPF8Q3BBV2 869 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms