RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
CNTNAP1-201ENST00000264638 NBR1Q14596 966 aa17.82■□□□□ 0.44
CNTNAP1-201ENST00000264638 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
CNTNAP1-201ENST00000264638 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
CNTNAP1-201ENST00000264638 CFDP1Q9UEE9 299 aaPredicted RBP17.8■□□□□ 0.44
CNTNAP1-201ENST00000264638 TMC1Q8TDI8 760 aa17.8■□□□□ 0.44
CNTNAP1-201ENST00000264638 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
CNTNAP1-201ENST00000264638 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
CNTNAP1-201ENST00000264638 FAM9BQ8IZU0 186 aa17.76■□□□□ 0.43
CNTNAP1-201ENST00000264638 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
CNTNAP1-201ENST00000264638 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
CNTNAP1-201ENST00000264638 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
CNTNAP1-201ENST00000264638 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
CNTNAP1-201ENST00000264638 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
CNTNAP1-201ENST00000264638 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.42
CNTNAP1-201ENST00000264638 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
CNTNAP1-201ENST00000264638 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
CNTNAP1-201ENST00000264638 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
CNTNAP1-201ENST00000264638 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
CNTNAP1-201ENST00000264638 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
CNTNAP1-201ENST00000264638 CDCA8Q53HL2 280 aa17.64■□□□□ 0.42
CNTNAP1-201ENST00000264638 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
CNTNAP1-201ENST00000264638 CUX2O14529 1486 aa17.64■□□□□ 0.41
CNTNAP1-201ENST00000264638 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
CNTNAP1-201ENST00000264638 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
CNTNAP1-201ENST00000264638 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
CNTNAP1-201ENST00000264638 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
CNTNAP1-201ENST00000264638 TRIM44Q96DX7 344 aaPredicted RBP17.61■□□□□ 0.41
CNTNAP1-201ENST00000264638 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
CNTNAP1-201ENST00000264638 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
CNTNAP1-201ENST00000264638 ARXQ96QS3 562 aa17.58■□□□□ 0.4
CNTNAP1-201ENST00000264638 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
CNTNAP1-201ENST00000264638 BECN1Q14457 450 aa17.56■□□□□ 0.4
CNTNAP1-201ENST00000264638 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
CNTNAP1-201ENST00000264638 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
CNTNAP1-201ENST00000264638 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.4
CNTNAP1-201ENST00000264638 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
CNTNAP1-201ENST00000264638 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CNTNAP1-201ENST00000264638 HIRIP3Q9BW71 556 aaPredicted RBP17.51■□□□□ 0.39
CNTNAP1-201ENST00000264638 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
CNTNAP1-201ENST00000264638 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
CNTNAP1-201ENST00000264638 CARMIL2Q6F5E8 1435 aa17.5■□□□□ 0.39
CNTNAP1-201ENST00000264638 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
CNTNAP1-201ENST00000264638 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
CNTNAP1-201ENST00000264638 SOGA1O94964 1423 aa17.47■□□□□ 0.39
CNTNAP1-201ENST00000264638 KANK1Q14678 1352 aa17.47■□□□□ 0.39
CNTNAP1-201ENST00000264638 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
CNTNAP1-201ENST00000264638 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
CNTNAP1-201ENST00000264638 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
CNTNAP1-201ENST00000264638 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
CNTNAP1-201ENST00000264638 POGKQ9P215 609 aa17.43■□□□□ 0.38
CNTNAP1-201ENST00000264638 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
CNTNAP1-201ENST00000264638 MIER1Q8N108 512 aa17.43■□□□□ 0.38
CNTNAP1-201ENST00000264638 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
CNTNAP1-201ENST00000264638 A0A0G2JS52 829 aa17.41■□□□□ 0.38
CNTNAP1-201ENST00000264638 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.38
CNTNAP1-201ENST00000264638 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
CNTNAP1-201ENST00000264638 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
CNTNAP1-201ENST00000264638 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP1-201ENST00000264638 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
CNTNAP1-201ENST00000264638 NAP1L5Q96NT1 182 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP1-201ENST00000264638 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
CNTNAP1-201ENST00000264638 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
CNTNAP1-201ENST00000264638 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
CNTNAP1-201ENST00000264638 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
CNTNAP1-201ENST00000264638 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
CNTNAP1-201ENST00000264638 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
CNTNAP1-201ENST00000264638 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
CNTNAP1-201ENST00000264638 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
CNTNAP1-201ENST00000264638 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
CNTNAP1-201ENST00000264638 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
CNTNAP1-201ENST00000264638 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
CNTNAP1-201ENST00000264638 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
CNTNAP1-201ENST00000264638 TMF1P82094 1093 aa17.3■□□□□ 0.36
CNTNAP1-201ENST00000264638 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
CNTNAP1-201ENST00000264638 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
CNTNAP1-201ENST00000264638 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
CNTNAP1-201ENST00000264638 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
CNTNAP1-201ENST00000264638 MLECQ14165 292 aa17.27■□□□□ 0.36
CNTNAP1-201ENST00000264638 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.35
CNTNAP1-201ENST00000264638 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
CNTNAP1-201ENST00000264638 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
CNTNAP1-201ENST00000264638 GGT6Q6P531 493 aa17.26■□□□□ 0.35
CNTNAP1-201ENST00000264638 RTN4Q9NQC3 1192 aaKnown RBP17.23■□□□□ 0.35
CNTNAP1-201ENST00000264638 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
CNTNAP1-201ENST00000264638 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
CNTNAP1-201ENST00000264638 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
CNTNAP1-201ENST00000264638 PKD2Q13563 968 aa17.22■□□□□ 0.35
CNTNAP1-201ENST00000264638 RSPH4AQ5TD94 716 aa17.22■□□□□ 0.35
CNTNAP1-201ENST00000264638 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
CNTNAP1-201ENST00000264638 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
CNTNAP1-201ENST00000264638 WIZO95785 1651 aa17.21■□□□□ 0.35
CNTNAP1-201ENST00000264638 FTSJ3Q8IY81 847 aaKnown RBP17.19■□□□□ 0.34
CNTNAP1-201ENST00000264638 CHMP4BQ9H444 224 aaKnown RBP17.19■□□□□ 0.34
CNTNAP1-201ENST00000264638 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
CNTNAP1-201ENST00000264638 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
CNTNAP1-201ENST00000264638 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
CNTNAP1-201ENST00000264638 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
CNTNAP1-201ENST00000264638 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
CNTNAP1-201ENST00000264638 MS4A1P11836 297 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms