RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 DNMBPQ6XZF7 1577 aa28.82■■■□□ 2.2
NEIL3-201ENST00000264596 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
NEIL3-201ENST00000264596 FHAD1B1AJZ9 1412 aa28.79■■■□□ 2.2
NEIL3-201ENST00000264596 ATP1B4Q9UN42 357 aaPredicted RBP28.79■■■□□ 2.2
NEIL3-201ENST00000264596 NESP48681 1621 aa28.78■■■□□ 2.2
NEIL3-201ENST00000264596 PCF11O94913 1555 aaKnown RBP28.77■■■□□ 2.2
NEIL3-201ENST00000264596 TOPBP1Q92547 1522 aa28.77■■■□□ 2.2
NEIL3-201ENST00000264596 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
NEIL3-201ENST00000264596 PHLDB1Q86UU1 1377 aa28.76■■■□□ 2.2
NEIL3-201ENST00000264596 ABCA10Q8WWZ4 1543 aa28.75■■■□□ 2.19
NEIL3-201ENST00000264596 MYT1Q01538 1121 aa28.74■■■□□ 2.19
NEIL3-201ENST00000264596 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
NEIL3-201ENST00000264596 FHOD3Q2V2M9 1422 aa28.72■■■□□ 2.19
NEIL3-201ENST00000264596 FAM50AQ14320 339 aaKnown RBP28.71■■■□□ 2.19
NEIL3-201ENST00000264596 SETD5Q9C0A6 1442 aa28.67■■■□□ 2.18
NEIL3-201ENST00000264596 MAPKBP1O60336 1514 aa28.66■■■□□ 2.18
NEIL3-201ENST00000264596 CUL7Q14999 1698 aa28.63■■■□□ 2.17
NEIL3-201ENST00000264596 EFCAB5A4FU69 1503 aa28.61■■■□□ 2.17
NEIL3-201ENST00000264596 FYCO1Q9BQS8 1478 aa28.6■■■□□ 2.17
NEIL3-201ENST00000264596 CTTNBP2Q8WZ74 1663 aa28.59■■■□□ 2.17
NEIL3-201ENST00000264596 CASKIN1Q8WXD9 1431 aa28.56■■■□□ 2.16
NEIL3-201ENST00000264596 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
NEIL3-201ENST00000264596 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
NEIL3-201ENST00000264596 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
NEIL3-201ENST00000264596 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
NEIL3-201ENST00000264596 SIN3AQ96ST3 1273 aa28.49■■■□□ 2.15
NEIL3-201ENST00000264596 TDRD9Q8NDG6 1382 aaKnown RBP28.48■■■□□ 2.15
NEIL3-201ENST00000264596 FMN1Q68DA7 1419 aa28.45■■■□□ 2.15
NEIL3-201ENST00000264596 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
NEIL3-201ENST00000264596 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
NEIL3-201ENST00000264596 GAPVD1Q14C86 1478 aa28.39■■■□□ 2.13
NEIL3-201ENST00000264596 MTUS2Q5JR59 1369 aa28.36■■■□□ 2.13
NEIL3-201ENST00000264596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.36■■■□□ 2.13
NEIL3-201ENST00000264596 FGD6Q6ZV73 1430 aa28.36■■■□□ 2.13
NEIL3-201ENST00000264596 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
NEIL3-201ENST00000264596 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
NEIL3-201ENST00000264596 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
NEIL3-201ENST00000264596 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
NEIL3-201ENST00000264596 KIF21AQ7Z4S6 1674 aa28.28■■■□□ 2.12
NEIL3-201ENST00000264596 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
NEIL3-201ENST00000264596 KCNH8Q96L42 1107 aa28.23■■■□□ 2.11
NEIL3-201ENST00000264596 TIMELESSQ9UNS1 1208 aa28.23■■■□□ 2.11
NEIL3-201ENST00000264596 DDX10Q13206 875 aaKnown RBP28.22■■■□□ 2.11
NEIL3-201ENST00000264596 NCOA2Q15596 1464 aa28.22■■■□□ 2.11
NEIL3-201ENST00000264596 CCDC18Q5T9S5 1454 aa28.22■■■□□ 2.11
NEIL3-201ENST00000264596 PTPRKQ15262 1439 aa28.22■■■□□ 2.11
NEIL3-201ENST00000264596 PPP1R15AO75807 674 aaPredicted RBP28.18■■■□□ 2.1
NEIL3-201ENST00000264596 HIRIP3Q9BW71 556 aaPredicted RBP28.18■■■□□ 2.1
NEIL3-201ENST00000264596 MYOM3Q5VTT5 1437 aa28.17■■■□□ 2.1
NEIL3-201ENST00000264596 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
NEIL3-201ENST00000264596 SUPT6HQ7KZ85 1726 aaKnown RBP28.16■■■□□ 2.1
NEIL3-201ENST00000264596 HFM1A2PYH4 1435 aa28.16■■■□□ 2.1
NEIL3-201ENST00000264596 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
NEIL3-201ENST00000264596 PTPN23Q9H3S7 1636 aa28.16■■■□□ 2.1
NEIL3-201ENST00000264596 EHBP1L1Q8N3D4 1523 aa28.14■■■□□ 2.1
NEIL3-201ENST00000264596 SUPT16HQ9Y5B9 1047 aaKnown RBP28.12■■■□□ 2.09
NEIL3-201ENST00000264596 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
NEIL3-201ENST00000264596 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
NEIL3-201ENST00000264596 NAIPQ13075 1403 aa28.09■■■□□ 2.09
NEIL3-201ENST00000264596 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.09
NEIL3-201ENST00000264596 PBRM1Q86U86 1689 aa28.08■■■□□ 2.08
NEIL3-201ENST00000264596 UGGT2Q9NYU1 1516 aa28.06■■■□□ 2.08
NEIL3-201ENST00000264596 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
NEIL3-201ENST00000264596 IQGAP2Q13576 1575 aa28■■■□□ 2.07
NEIL3-201ENST00000264596 HECW1Q76N89 1606 aa28■■■□□ 2.07
NEIL3-201ENST00000264596 RRP7BPQ9NSQ0 103 aa27.99■■■□□ 2.07
NEIL3-201ENST00000264596 CHIC2Q9UKJ5 165 aa27.99■■■□□ 2.07
NEIL3-201ENST00000264596 ADAMTS12P58397 1594 aa27.97■■■□□ 2.07
NEIL3-201ENST00000264596 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
NEIL3-201ENST00000264596 EPRSP07814 1512 aaKnown RBP27.94■■■□□ 2.06
NEIL3-201ENST00000264596 CDK13Q14004 1512 aaKnown RBP27.93■■■□□ 2.06
NEIL3-201ENST00000264596 TCOF1Q13428 1488 aaKnown RBP27.91■■■□□ 2.06
NEIL3-201ENST00000264596 ANP32CO43423 234 aa27.91■■■□□ 2.06
NEIL3-201ENST00000264596 MRC2Q9UBG0 1479 aa27.9■■■□□ 2.06
NEIL3-201ENST00000264596 TRIM52Q96A61 297 aa27.87■■■□□ 2.05
NEIL3-201ENST00000264596 GCC2Q8IWJ2 1684 aa27.86■■■□□ 2.05
NEIL3-201ENST00000264596 WDR62O43379 1518 aa27.86■■■□□ 2.05
NEIL3-201ENST00000264596 CCER2I3L3R5 266 aa27.83■■■□□ 2.05
NEIL3-201ENST00000264596 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
NEIL3-201ENST00000264596 KDM6BO15054 1643 aa27.83■■■□□ 2.04
NEIL3-201ENST00000264596 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
NEIL3-201ENST00000264596 MIA2Q96PC5 1412 aa27.79■■■□□ 2.04
NEIL3-201ENST00000264596 DENND4BO75064 1496 aaPredicted RBP27.79■■■□□ 2.04
NEIL3-201ENST00000264596 AKNAQ7Z591 1439 aa27.77■■■□□ 2.04
NEIL3-201ENST00000264596 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
NEIL3-201ENST00000264596 BCANQ96GW7 911 aa27.72■■■□□ 2.03
NEIL3-201ENST00000264596 MPHOSPH9Q99550 1183 aa27.72■■■□□ 2.03
NEIL3-201ENST00000264596 KIAA0556O60303 1618 aa27.7■■■□□ 2.03
NEIL3-201ENST00000264596 FKBP8Q14318 412 aa27.7■■■□□ 2.02
NEIL3-201ENST00000264596 FOXD1Q16676 465 aa27.69■■■□□ 2.02
NEIL3-201ENST00000264596 DISP1Q96F81 1524 aa27.69■■■□□ 2.02
NEIL3-201ENST00000264596 KIAA0586Q9BVV6 1533 aa27.68■■■□□ 2.02
NEIL3-201ENST00000264596 HSPA5P11021 654 aaKnown RBP27.67■■■□□ 2.02
NEIL3-201ENST00000264596 DAPK1P53355 1430 aa27.65■■■□□ 2.02
NEIL3-201ENST00000264596 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.02
NEIL3-201ENST00000264596 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
NEIL3-201ENST00000264596 WASHC2AQ641Q2 1341 aa27.61■■■□□ 2.01
NEIL3-201ENST00000264596 TSHZ2Q9NRE2 1034 aa27.61■■■□□ 2.01
NEIL3-201ENST00000264596 RAPGEF6Q8TEU7 1601 aa27.61■■■□□ 2.01
NEIL3-201ENST00000264596 GRIN2AQ12879 1464 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms