RNA–Protein interactions for RNA: ENST00000263377.6

BRD4-201, Transcript of bromodomain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD4, Length 7,169 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-201ENST00000263377 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
BRD4-201ENST00000263377 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
BRD4-201ENST00000263377 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
BRD4-201ENST00000263377 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
BRD4-201ENST00000263377 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
BRD4-201ENST00000263377 KCNH8Q96L42 1107 aa15.17■□□□□ 0.02
BRD4-201ENST00000263377 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
BRD4-201ENST00000263377 MRS2Q9HD23 443 aa15.15■□□□□ 0.02
BRD4-201ENST00000263377 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
BRD4-201ENST00000263377 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
BRD4-201ENST00000263377 MIER1Q8N108 512 aa15.11■□□□□ 0.01
BRD4-201ENST00000263377 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
BRD4-201ENST00000263377 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
BRD4-201ENST00000263377 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
BRD4-201ENST00000263377 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
BRD4-201ENST00000263377 UPF2Q9HAU5 1272 aaKnown RBP15.05■□□□□ 0
BRD4-201ENST00000263377 SOGA1O94964 1423 aa15.05■□□□□ 0
BRD4-201ENST00000263377 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
BRD4-201ENST00000263377 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
BRD4-201ENST00000263377 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
BRD4-201ENST00000263377 RGL3Q3MIN7 710 aa15.03■□□□□ -0
BRD4-201ENST00000263377 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
BRD4-201ENST00000263377 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
BRD4-201ENST00000263377 FHAD1B1AJZ9 1412 aa15.02□□□□□ -0.01
BRD4-201ENST00000263377 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
BRD4-201ENST00000263377 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
BRD4-201ENST00000263377 ERCC6Q03468 1493 aa15□□□□□ -0.01
BRD4-201ENST00000263377 CUX2O14529 1486 aa14.98□□□□□ -0.01
BRD4-201ENST00000263377 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
BRD4-201ENST00000263377 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
BRD4-201ENST00000263377 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
BRD4-201ENST00000263377 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
BRD4-201ENST00000263377 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
BRD4-201ENST00000263377 C14orf37Q86TY3 774 aa14.96□□□□□ -0.02
BRD4-201ENST00000263377 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
BRD4-201ENST00000263377 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
BRD4-201ENST00000263377 ANP32BQ92688 251 aaKnown RBP14.92□□□□□ -0.02
BRD4-201ENST00000263377 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
BRD4-201ENST00000263377 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
BRD4-201ENST00000263377 WIZO95785 1651 aa14.92□□□□□ -0.02
BRD4-201ENST00000263377 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
BRD4-201ENST00000263377 A0A0G2JS52 829 aa14.9□□□□□ -0.02
BRD4-201ENST00000263377 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
BRD4-201ENST00000263377 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
BRD4-201ENST00000263377 NBR1Q14596 966 aa14.88□□□□□ -0.03
BRD4-201ENST00000263377 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
BRD4-201ENST00000263377 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
BRD4-201ENST00000263377 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
BRD4-201ENST00000263377 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
BRD4-201ENST00000263377 CFAP53Q96M91 514 aa14.85□□□□□ -0.03
BRD4-201ENST00000263377 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
BRD4-201ENST00000263377 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.03
BRD4-201ENST00000263377 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
BRD4-201ENST00000263377 ARXQ96QS3 562 aa14.82□□□□□ -0.04
BRD4-201ENST00000263377 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
BRD4-201ENST00000263377 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
BRD4-201ENST00000263377 POGKQ9P215 609 aa14.78□□□□□ -0.04
BRD4-201ENST00000263377 NEUROD2Q15784 382 aa14.77□□□□□ -0.04
BRD4-201ENST00000263377 CC2D1BQ5T0F9 858 aaKnown RBP14.77□□□□□ -0.05
BRD4-201ENST00000263377 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
BRD4-201ENST00000263377 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
BRD4-201ENST00000263377 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
BRD4-201ENST00000263377 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
BRD4-201ENST00000263377 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
BRD4-201ENST00000263377 DCAF11Q8TEB1 546 aa14.73□□□□□ -0.05
BRD4-201ENST00000263377 ARHGAP35Q9NRY4 1499 aa14.73□□□□□ -0.05
BRD4-201ENST00000263377 KANK1Q14678 1352 aa14.71□□□□□ -0.05
BRD4-201ENST00000263377 FTSJ3Q8IY81 847 aaKnown RBP14.71□□□□□ -0.05
BRD4-201ENST00000263377 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
BRD4-201ENST00000263377 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
BRD4-201ENST00000263377 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
BRD4-201ENST00000263377 TDRD9Q8NDG6 1382 aaKnown RBP14.7□□□□□ -0.06
BRD4-201ENST00000263377 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
BRD4-201ENST00000263377 CARMIL2Q6F5E8 1435 aa14.69□□□□□ -0.06
BRD4-201ENST00000263377 BECN1Q14457 450 aa14.69□□□□□ -0.06
BRD4-201ENST00000263377 LMOD2Q6P5Q4 547 aa14.68□□□□□ -0.06
BRD4-201ENST00000263377 TMF1P82094 1093 aa14.68□□□□□ -0.06
BRD4-201ENST00000263377 MLECQ14165 292 aa14.67□□□□□ -0.06
BRD4-201ENST00000263377 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
BRD4-201ENST00000263377 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
BRD4-201ENST00000263377 FRAT1Q92837 279 aaPredicted RBP14.66□□□□□ -0.06
BRD4-201ENST00000263377 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
BRD4-201ENST00000263377 FOXD1Q16676 465 aa14.65□□□□□ -0.06
BRD4-201ENST00000263377 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
BRD4-201ENST00000263377 PKD2Q13563 968 aa14.63□□□□□ -0.07
BRD4-201ENST00000263377 CDK11BP21127 795 aaKnown RBP14.63□□□□□ -0.07
BRD4-201ENST00000263377 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
BRD4-201ENST00000263377 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
BRD4-201ENST00000263377 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
BRD4-201ENST00000263377 RGS3P49796 1198 aa14.6□□□□□ -0.07
BRD4-201ENST00000263377 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
BRD4-201ENST00000263377 GGT6Q6P531 493 aa14.6□□□□□ -0.07
BRD4-201ENST00000263377 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
BRD4-201ENST00000263377 IGF1RP08069 1367 aa14.59□□□□□ -0.07
BRD4-201ENST00000263377 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
BRD4-201ENST00000263377 CFTRP13569 1480 aa14.58□□□□□ -0.08
BRD4-201ENST00000263377 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
BRD4-201ENST00000263377 SOX12O15370 315 aa14.57□□□□□ -0.08
BRD4-201ENST00000263377 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
BRD4-201ENST00000263377 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms