RNA–Protein interactions for RNA: ENST00000263377.6

BRD4-201, Transcript of bromodomain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD4, Length 7,169 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-201ENST00000263377 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
BRD4-201ENST00000263377 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
BRD4-201ENST00000263377 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
BRD4-201ENST00000263377 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
BRD4-201ENST00000263377 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
BRD4-201ENST00000263377 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
BRD4-201ENST00000263377 APLP2Q06481 763 aa17.72■□□□□ 0.43
BRD4-201ENST00000263377 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
BRD4-201ENST00000263377 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
BRD4-201ENST00000263377 PCGF6Q9BYE7 350 aa17.41■□□□□ 0.38
BRD4-201ENST00000263377 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
BRD4-201ENST00000263377 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
BRD4-201ENST00000263377 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
BRD4-201ENST00000263377 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
BRD4-201ENST00000263377 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
BRD4-201ENST00000263377 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
BRD4-201ENST00000263377 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
BRD4-201ENST00000263377 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
BRD4-201ENST00000263377 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
BRD4-201ENST00000263377 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
BRD4-201ENST00000263377 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
BRD4-201ENST00000263377 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
BRD4-201ENST00000263377 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
BRD4-201ENST00000263377 ITGAEP38570 1179 aa16.64■□□□□ 0.25
BRD4-201ENST00000263377 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
BRD4-201ENST00000263377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
BRD4-201ENST00000263377 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
BRD4-201ENST00000263377 NEFLP07196 543 aa16.6■□□□□ 0.25
BRD4-201ENST00000263377 ABCC9O60706 1549 aa16.58■□□□□ 0.24
BRD4-201ENST00000263377 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
BRD4-201ENST00000263377 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
BRD4-201ENST00000263377 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
BRD4-201ENST00000263377 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
BRD4-201ENST00000263377 HRCP23327 699 aa16.44■□□□□ 0.22
BRD4-201ENST00000263377 MYT1Q01538 1121 aa16.37■□□□□ 0.21
BRD4-201ENST00000263377 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
BRD4-201ENST00000263377 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
BRD4-201ENST00000263377 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
BRD4-201ENST00000263377 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
BRD4-201ENST00000263377 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
BRD4-201ENST00000263377 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
BRD4-201ENST00000263377 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
BRD4-201ENST00000263377 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
BRD4-201ENST00000263377 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
BRD4-201ENST00000263377 FBLN2P98095 1184 aa16.03■□□□□ 0.16
BRD4-201ENST00000263377 NACADO15069 1562 aa15.98■□□□□ 0.15
BRD4-201ENST00000263377 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
BRD4-201ENST00000263377 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
BRD4-201ENST00000263377 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
BRD4-201ENST00000263377 ARID3CA6NKF2 412 aa15.91■□□□□ 0.14
BRD4-201ENST00000263377 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
BRD4-201ENST00000263377 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
BRD4-201ENST00000263377 CLSPNQ9HAW4 1339 aa15.82■□□□□ 0.12
BRD4-201ENST00000263377 ANP32CO43423 234 aa15.8■□□□□ 0.12
BRD4-201ENST00000263377 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
BRD4-201ENST00000263377 BCANQ96GW7 911 aa15.78■□□□□ 0.12
BRD4-201ENST00000263377 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
BRD4-201ENST00000263377 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
BRD4-201ENST00000263377 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
BRD4-201ENST00000263377 EEA1Q15075 1411 aa15.67■□□□□ 0.1
BRD4-201ENST00000263377 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
BRD4-201ENST00000263377 CDK11AQ9UQ88 783 aaPredicted RBP15.62■□□□□ 0.09
BRD4-201ENST00000263377 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
BRD4-201ENST00000263377 CANXP27824 592 aaKnown RBP15.57■□□□□ 0.08
BRD4-201ENST00000263377 SLC24A1O60721 1099 aa15.55■□□□□ 0.08
BRD4-201ENST00000263377 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
BRD4-201ENST00000263377 BCL11AQ9H165 835 aa15.51■□□□□ 0.07
BRD4-201ENST00000263377 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
BRD4-201ENST00000263377 NEFMP07197 916 aa15.49■□□□□ 0.07
BRD4-201ENST00000263377 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
BRD4-201ENST00000263377 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
BRD4-201ENST00000263377 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
BRD4-201ENST00000263377 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
BRD4-201ENST00000263377 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
BRD4-201ENST00000263377 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
BRD4-201ENST00000263377 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
BRD4-201ENST00000263377 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
BRD4-201ENST00000263377 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
BRD4-201ENST00000263377 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
BRD4-201ENST00000263377 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
BRD4-201ENST00000263377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.056e-8■■□□□ 14
BRD4-201ENST00000263377 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
BRD4-201ENST00000263377 CLIP1P30622 1438 aa15.37■□□□□ 0.05
BRD4-201ENST00000263377 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
BRD4-201ENST00000263377 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
BRD4-201ENST00000263377 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
BRD4-201ENST00000263377 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
BRD4-201ENST00000263377 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
BRD4-201ENST00000263377 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
BRD4-201ENST00000263377 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
BRD4-201ENST00000263377 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
BRD4-201ENST00000263377 FKBP8Q14318 412 aa15.3■□□□□ 0.04
BRD4-201ENST00000263377 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
BRD4-201ENST00000263377 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
BRD4-201ENST00000263377 TSPY4P0CV99 314 aa15.27■□□□□ 0.04
BRD4-201ENST00000263377 TSPY10P0CW01 314 aa15.27■□□□□ 0.04
BRD4-201ENST00000263377 ANP32AP39687 249 aaKnown RBP15.27■□□□□ 0.04
BRD4-201ENST00000263377 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.04
BRD4-201ENST00000263377 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
BRD4-201ENST00000263377 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms