RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
UBE2R2-201ENST00000263228 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
UBE2R2-201ENST00000263228 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
UBE2R2-201ENST00000263228 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
UBE2R2-201ENST00000263228 FBLN2P98095 1184 aa23.05■■□□□ 1.28
UBE2R2-201ENST00000263228 ANP32AP39687 249 aaKnown RBP23.04■■□□□ 1.28
UBE2R2-201ENST00000263228 EEA1Q15075 1411 aa23.03■■□□□ 1.28
UBE2R2-201ENST00000263228 CCDC136Q96JN2 1154 aa23.01■■□□□ 1.27
UBE2R2-201ENST00000263228 RBM19Q9Y4C8 960 aaKnown RBP23.01■■□□□ 1.27
UBE2R2-201ENST00000263228 B4GALNT3Q6L9W6 998 aa23■■□□□ 1.27
UBE2R2-201ENST00000263228 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
UBE2R2-201ENST00000263228 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
UBE2R2-201ENST00000263228 RTN4Q9NQC3 1192 aaKnown RBP22.93■■□□□ 1.26
UBE2R2-201ENST00000263228 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
UBE2R2-201ENST00000263228 ARXQ96QS3 562 aa22.91■■□□□ 1.26
UBE2R2-201ENST00000263228 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
UBE2R2-201ENST00000263228 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
UBE2R2-201ENST00000263228 ZBTB47Q9UFB7 747 aaPredicted RBP22.85■■□□□ 1.25
UBE2R2-201ENST00000263228 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
UBE2R2-201ENST00000263228 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
UBE2R2-201ENST00000263228 EIF4G2P78344 907 aaKnown RBP eCLIP22.78■■□□□ 1.248e-9■□□□□ 9.2
UBE2R2-201ENST00000263228 FOXD1Q16676 465 aa22.77■■□□□ 1.24
UBE2R2-201ENST00000263228 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
UBE2R2-201ENST00000263228 LAS1LQ9Y4W2 734 aaKnown RBP22.74■■□□□ 1.23
UBE2R2-201ENST00000263228 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
UBE2R2-201ENST00000263228 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
UBE2R2-201ENST00000263228 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
UBE2R2-201ENST00000263228 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
UBE2R2-201ENST00000263228 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
UBE2R2-201ENST00000263228 CANXP27824 592 aaKnown RBP22.68■■□□□ 1.22
UBE2R2-201ENST00000263228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.22
UBE2R2-201ENST00000263228 KIF27Q86VH2 1401 aa22.64■■□□□ 1.21
UBE2R2-201ENST00000263228 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.21
UBE2R2-201ENST00000263228 RGL3Q3MIN7 710 aa22.62■■□□□ 1.21
UBE2R2-201ENST00000263228 DHX57Q6P158 1386 aaKnown RBP22.61■■□□□ 1.21
UBE2R2-201ENST00000263228 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
UBE2R2-201ENST00000263228 PPP4R2Q9NY27 417 aa22.58■■□□□ 1.21
UBE2R2-201ENST00000263228 KIF21BO75037 1637 aa22.55■■□□□ 1.2
UBE2R2-201ENST00000263228 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
UBE2R2-201ENST00000263228 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
UBE2R2-201ENST00000263228 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
UBE2R2-201ENST00000263228 PPP1R15AO75807 674 aaPredicted RBP22.5■■□□□ 1.19
UBE2R2-201ENST00000263228 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
UBE2R2-201ENST00000263228 CUX2O14529 1486 aa22.48■■□□□ 1.19
UBE2R2-201ENST00000263228 NEFMP07197 916 aa22.44■■□□□ 1.18
UBE2R2-201ENST00000263228 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
UBE2R2-201ENST00000263228 CFTRP13569 1480 aa22.42■■□□□ 1.18
UBE2R2-201ENST00000263228 RGS3P49796 1198 aa22.42■■□□□ 1.18
UBE2R2-201ENST00000263228 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
UBE2R2-201ENST00000263228 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
UBE2R2-201ENST00000263228 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
UBE2R2-201ENST00000263228 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
UBE2R2-201ENST00000263228 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
UBE2R2-201ENST00000263228 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
UBE2R2-201ENST00000263228 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
UBE2R2-201ENST00000263228 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
UBE2R2-201ENST00000263228 CUX1P39880 1505 aa22.33■■□□□ 1.17
UBE2R2-201ENST00000263228 NEUROD2Q15784 382 aa22.33■■□□□ 1.17
UBE2R2-201ENST00000263228 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
UBE2R2-201ENST00000263228 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
UBE2R2-201ENST00000263228 WDR43Q15061 677 aaKnown RBP eCLIP22.29■■□□□ 1.16
UBE2R2-201ENST00000263228 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
UBE2R2-201ENST00000263228 TSPY4P0CV99 314 aa22.27■■□□□ 1.16
UBE2R2-201ENST00000263228 TSPY10P0CW01 314 aa22.27■■□□□ 1.16
UBE2R2-201ENST00000263228 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
UBE2R2-201ENST00000263228 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
UBE2R2-201ENST00000263228 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
UBE2R2-201ENST00000263228 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
UBE2R2-201ENST00000263228 IGF1RP08069 1367 aa22.21■■□□□ 1.15
UBE2R2-201ENST00000263228 CFDP1Q9UEE9 299 aaPredicted RBP22.21■■□□□ 1.15
UBE2R2-201ENST00000263228 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
UBE2R2-201ENST00000263228 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
UBE2R2-201ENST00000263228 HSP90AA1P07900 732 aaKnown RBP22.19■■□□□ 1.14
UBE2R2-201ENST00000263228 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
UBE2R2-201ENST00000263228 SPRYD3Q8NCJ5 442 aa22.16■■□□□ 1.14
UBE2R2-201ENST00000263228 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
UBE2R2-201ENST00000263228 NESP48681 1621 aa22.16■■□□□ 1.14
UBE2R2-201ENST00000263228 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
UBE2R2-201ENST00000263228 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
UBE2R2-201ENST00000263228 PLIN1O60240 522 aa22.14■■□□□ 1.14
UBE2R2-201ENST00000263228 ARHGAP35Q9NRY4 1499 aa22.14■■□□□ 1.13
UBE2R2-201ENST00000263228 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
UBE2R2-201ENST00000263228 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
UBE2R2-201ENST00000263228 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
UBE2R2-201ENST00000263228 TIMELESSQ9UNS1 1208 aa22.12■■□□□ 1.13
UBE2R2-201ENST00000263228 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
UBE2R2-201ENST00000263228 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.12■■□□□ 1.13
UBE2R2-201ENST00000263228 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
UBE2R2-201ENST00000263228 UPF2Q9HAU5 1272 aaKnown RBP22.11■■□□□ 1.13
UBE2R2-201ENST00000263228 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
UBE2R2-201ENST00000263228 PKD2Q13563 968 aa22.09■■□□□ 1.13
UBE2R2-201ENST00000263228 PRKRIP1Q9H875 184 aaPredicted RBP22.09■■□□□ 1.13
UBE2R2-201ENST00000263228 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
UBE2R2-201ENST00000263228 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
UBE2R2-201ENST00000263228 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
UBE2R2-201ENST00000263228 MSH5O43196 834 aa22.06■■□□□ 1.12
UBE2R2-201ENST00000263228 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
UBE2R2-201ENST00000263228 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
UBE2R2-201ENST00000263228 IPO9Q96P70 1041 aaKnown RBP22.03■■□□□ 1.12
UBE2R2-201ENST00000263228 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms