RNA–Protein interactions for RNA: ENST00000262919.9

ATRN-201, Transcript of attractin, humanhuman

APPRIS P4 TSL 5 BASIC

Gene ATRN, Length 8,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-201ENST00000262919 CHAF1AQ13111 956 aaPredicted RBP24.14■■□□□ 1.45
ATRN-201ENST00000262919 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
ATRN-201ENST00000262919 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
ATRN-201ENST00000262919 DDX10Q13206 875 aaKnown RBP24.11■■□□□ 1.45
ATRN-201ENST00000262919 CFAP53Q96M91 514 aa24.1■■□□□ 1.45
ATRN-201ENST00000262919 CFAP44Q96MT7 982 aa24.1■■□□□ 1.45
ATRN-201ENST00000262919 MS4A1P11836 297 aa24.06■■□□□ 1.44
ATRN-201ENST00000262919 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
ATRN-201ENST00000262919 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
ATRN-201ENST00000262919 P3H3Q8IVL6 736 aa24.04■■□□□ 1.44
ATRN-201ENST00000262919 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
ATRN-201ENST00000262919 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
ATRN-201ENST00000262919 FTSJ3Q8IY81 847 aaKnown RBP24.03■■□□□ 1.44
ATRN-201ENST00000262919 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
ATRN-201ENST00000262919 PNNQ9H307 717 aaKnown RBP23.97■■□□□ 1.43
ATRN-201ENST00000262919 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
ATRN-201ENST00000262919 PTMSP20962 102 aa23.94■■□□□ 1.42
ATRN-201ENST00000262919 ARID3CA6NKF2 412 aa23.91■■□□□ 1.42
ATRN-201ENST00000262919 EEA1Q15075 1411 aa23.89■■□□□ 1.42
ATRN-201ENST00000262919 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.42
ATRN-201ENST00000262919 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.41
ATRN-201ENST00000262919 NAP1L5Q96NT1 182 aaPredicted RBP23.87■■□□□ 1.41
ATRN-201ENST00000262919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.412e-7■■□□□ 12
ATRN-201ENST00000262919 USP35Q9P2H5 1018 aa23.85■■□□□ 1.41
ATRN-201ENST00000262919 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
ATRN-201ENST00000262919 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.4
ATRN-201ENST00000262919 MSNP26038 577 aaKnown RBP23.82■■□□□ 1.4
ATRN-201ENST00000262919 FGD1P98174 961 aa23.8■■□□□ 1.4
ATRN-201ENST00000262919 MCCP23508 829 aa23.8■■□□□ 1.4
ATRN-201ENST00000262919 NUDCQ9Y266 331 aa23.8■■□□□ 1.4
ATRN-201ENST00000262919 GOLGA6L4A6NEF3 574 aa23.79■■□□□ 1.4
ATRN-201ENST00000262919 KIAA2012Q0VF49 1180 aa23.79■■□□□ 1.4
ATRN-201ENST00000262919 MAPK8IP3Q9UPT6 1336 aa23.79■■□□□ 1.4
ATRN-201ENST00000262919 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
ATRN-201ENST00000262919 CLIP1P30622 1438 aa23.76■■□□□ 1.39
ATRN-201ENST00000262919 A0A0G2JS52 829 aa23.76■■□□□ 1.39
ATRN-201ENST00000262919 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
ATRN-201ENST00000262919 GOLGA2Q08379 1002 aa23.72■■□□□ 1.39
ATRN-201ENST00000262919 HSCBQ8IWL3 235 aa23.72■■□□□ 1.39
ATRN-201ENST00000262919 C14orf37Q86TY3 774 aa23.71■■□□□ 1.39
ATRN-201ENST00000262919 KCNJ4P48050 445 aa23.7■■□□□ 1.39
ATRN-201ENST00000262919 NOP58Q9Y2X3 529 aaKnown RBP23.7■■□□□ 1.38
ATRN-201ENST00000262919 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
ATRN-201ENST00000262919 CCDC34Q96HJ3 373 aa23.67■■□□□ 1.38
ATRN-201ENST00000262919 PPP4R2Q9NY27 417 aa23.66■■□□□ 1.38
ATRN-201ENST00000262919 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
ATRN-201ENST00000262919 HTATSF1O43719 755 aaKnown RBP23.64■■□□□ 1.38
ATRN-201ENST00000262919 OS9Q13438 667 aaPredicted RBP23.64■■□□□ 1.37
ATRN-201ENST00000262919 CHMP4AQ9BY43 222 aa23.63■■□□□ 1.37
ATRN-201ENST00000262919 NPHP1O15259 732 aa23.63■■□□□ 1.37
ATRN-201ENST00000262919 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
ATRN-201ENST00000262919 SYAP1Q96A49 352 aaPredicted RBP23.63■■□□□ 1.37
ATRN-201ENST00000262919 PLCB2Q00722 1185 aa23.61■■□□□ 1.37
ATRN-201ENST00000262919 DRC7Q8IY82 874 aa23.59■■□□□ 1.37
ATRN-201ENST00000262919 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
ATRN-201ENST00000262919 PLPPR3Q6T4P5 718 aa23.58■■□□□ 1.37
ATRN-201ENST00000262919 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
ATRN-201ENST00000262919 NOC3LQ8WTT2 800 aaKnown RBP23.55■■□□□ 1.36
ATRN-201ENST00000262919 GBP4Q96PP9 640 aa23.55■■□□□ 1.36
ATRN-201ENST00000262919 MIER1Q8N108 512 aa23.54■■□□□ 1.36
ATRN-201ENST00000262919 GOLGA6L1Q8N7Z2 621 aa23.53■■□□□ 1.36
ATRN-201ENST00000262919 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
ATRN-201ENST00000262919 GNL2Q13823 731 aaKnown RBP23.53■■□□□ 1.36
ATRN-201ENST00000262919 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
ATRN-201ENST00000262919 TPM4P67936 248 aa23.53■■□□□ 1.36
ATRN-201ENST00000262919 IRX6P78412 446 aaPredicted RBP23.52■■□□□ 1.36
ATRN-201ENST00000262919 ZBTB7CA1YPR0 619 aa23.5■■□□□ 1.35
ATRN-201ENST00000262919 TULP1O00294 542 aaPredicted RBP23.49■■□□□ 1.35
ATRN-201ENST00000262919 CALD1Q05682 793 aaKnown RBP23.49■■□□□ 1.35
ATRN-201ENST00000262919 KANK1Q14678 1352 aa23.48■■□□□ 1.35
ATRN-201ENST00000262919 KIAA1211Q6ZU35 1233 aa23.48■■□□□ 1.35
ATRN-201ENST00000262919 HDGFP51858 240 aaKnown RBP23.47■■□□□ 1.35
ATRN-201ENST00000262919 CSPP1Q1MSJ5 1256 aa23.47■■□□□ 1.35
ATRN-201ENST00000262919 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
ATRN-201ENST00000262919 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
ATRN-201ENST00000262919 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
ATRN-201ENST00000262919 NAP1L2Q9ULW6 460 aaPredicted RBP23.45■■□□□ 1.34
ATRN-201ENST00000262919 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
ATRN-201ENST00000262919 IPO8O15397 1037 aaKnown RBP23.44■■□□□ 1.34
ATRN-201ENST00000262919 PHF14O94880 888 aa23.44■■□□□ 1.34
ATRN-201ENST00000262919 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
ATRN-201ENST00000262919 CLSTN1O94985 981 aa23.41■■□□□ 1.34
ATRN-201ENST00000262919 POGKQ9P215 609 aa23.4■■□□□ 1.34
ATRN-201ENST00000262919 TNNT3P45378 269 aaPredicted RBP23.4■■□□□ 1.34
ATRN-201ENST00000262919 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
ATRN-201ENST00000262919 RGS3P49796 1198 aa23.39■■□□□ 1.33
ATRN-201ENST00000262919 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
ATRN-201ENST00000262919 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
ATRN-201ENST00000262919 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
ATRN-201ENST00000262919 GPATCH3Q96I76 525 aa23.36■■□□□ 1.33
ATRN-201ENST00000262919 FRAT1Q92837 279 aaPredicted RBP23.36■■□□□ 1.33
ATRN-201ENST00000262919 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
ATRN-201ENST00000262919 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
ATRN-201ENST00000262919 TMF1P82094 1093 aa23.35■■□□□ 1.33
ATRN-201ENST00000262919 TPRNQ4KMQ1 711 aa23.34■■□□□ 1.33
ATRN-201ENST00000262919 SETQ01105 290 aaPredicted RBP23.32■■□□□ 1.32
ATRN-201ENST00000262919 CHMP4CQ96CF2 233 aa23.32■■□□□ 1.32
ATRN-201ENST00000262919 KIF3AQ9Y496 699 aa23.3■■□□□ 1.32
ATRN-201ENST00000262919 A0A0U1RQG5 324 aaPredicted RBP23.29■■□□□ 1.32
ATRN-201ENST00000262919 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms