RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 WIZO95785 1651 aa10.73□□□□□ -0.69
RAB11A-201ENST00000261890 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
RAB11A-201ENST00000261890 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
RAB11A-201ENST00000261890 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
RAB11A-201ENST00000261890 ARID4BQ4LE39 1312 aaPredicted RBP10.71□□□□□ -0.69
RAB11A-201ENST00000261890 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.7
RAB11A-201ENST00000261890 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.7
RAB11A-201ENST00000261890 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
RAB11A-201ENST00000261890 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
RAB11A-201ENST00000261890 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
RAB11A-201ENST00000261890 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
RAB11A-201ENST00000261890 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
RAB11A-201ENST00000261890 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
RAB11A-201ENST00000261890 KANK1Q14678 1352 aa10.63□□□□□ -0.71
RAB11A-201ENST00000261890 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
RAB11A-201ENST00000261890 CLSPNQ9HAW4 1339 aa10.62□□□□□ -0.71
RAB11A-201ENST00000261890 EFCAB2Q5VUJ9 269 aa10.61□□□□□ -0.71
RAB11A-201ENST00000261890 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
RAB11A-201ENST00000261890 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
RAB11A-201ENST00000261890 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
RAB11A-201ENST00000261890 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
RAB11A-201ENST00000261890 JPH4Q96JJ6 628 aa10.6□□□□□ -0.71
RAB11A-201ENST00000261890 VPS8Q8N3P4 1428 aa10.58□□□□□ -0.72
RAB11A-201ENST00000261890 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
RAB11A-201ENST00000261890 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
RAB11A-201ENST00000261890 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
RAB11A-201ENST00000261890 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
RAB11A-201ENST00000261890 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
RAB11A-201ENST00000261890 HMGXB3Q12766 1538 aa10.55□□□□□ -0.72
RAB11A-201ENST00000261890 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
RAB11A-201ENST00000261890 PTPRGP23470 1445 aa10.51□□□□□ -0.73
RAB11A-201ENST00000261890 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
RAB11A-201ENST00000261890 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
RAB11A-201ENST00000261890 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
RAB11A-201ENST00000261890 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
RAB11A-201ENST00000261890 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
RAB11A-201ENST00000261890 CFTRP13569 1480 aa10.5□□□□□ -0.73
RAB11A-201ENST00000261890 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
RAB11A-201ENST00000261890 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
RAB11A-201ENST00000261890 ANKRD30AQ9BXX3 1397 aa10.49□□□□□ -0.73
RAB11A-201ENST00000261890 MRC2Q9UBG0 1479 aa10.48□□□□□ -0.73
RAB11A-201ENST00000261890 POGKQ9P215 609 aa10.46□□□□□ -0.73
RAB11A-201ENST00000261890 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.73
RAB11A-201ENST00000261890 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.74
RAB11A-201ENST00000261890 GRIN2BQ13224 1484 aa10.45□□□□□ -0.74
RAB11A-201ENST00000261890 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
RAB11A-201ENST00000261890 CARD11Q9BXL7 1154 aa10.45□□□□□ -0.74
RAB11A-201ENST00000261890 CFAP53Q96M91 514 aa10.45□□□□□ -0.74
RAB11A-201ENST00000261890 HAP1P54257 671 aaPredicted RBP10.44□□□□□ -0.74
RAB11A-201ENST00000261890 GGT6Q6P531 493 aa10.44□□□□□ -0.74
RAB11A-201ENST00000261890 IGF1RP08069 1367 aa10.44□□□□□ -0.74
RAB11A-201ENST00000261890 MLECQ14165 292 aa10.44□□□□□ -0.74
RAB11A-201ENST00000261890 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
RAB11A-201ENST00000261890 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
RAB11A-201ENST00000261890 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
RAB11A-201ENST00000261890 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.43□□□□□ -0.74
RAB11A-201ENST00000261890 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
RAB11A-201ENST00000261890 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
RAB11A-201ENST00000261890 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
RAB11A-201ENST00000261890 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
RAB11A-201ENST00000261890 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
RAB11A-201ENST00000261890 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
RAB11A-201ENST00000261890 AQRO60306 1485 aaKnown RBP eCLIP10.37□□□□□ -0.759e-9■■■■□ 19.4
RAB11A-201ENST00000261890 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
RAB11A-201ENST00000261890 KIF3BO15066 747 aa10.37□□□□□ -0.75
RAB11A-201ENST00000261890 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB11A-201ENST00000261890 PKD2Q13563 968 aa10.37□□□□□ -0.75
RAB11A-201ENST00000261890 TMF1P82094 1093 aa10.37□□□□□ -0.75
RAB11A-201ENST00000261890 NUP155O75694 1391 aa10.37□□□□□ -0.75
RAB11A-201ENST00000261890 BICRAQ9NZM4 1560 aa10.37□□□□□ -0.75
RAB11A-201ENST00000261890 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
RAB11A-201ENST00000261890 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
RAB11A-201ENST00000261890 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
RAB11A-201ENST00000261890 EID1Q9Y6B2 187 aa10.36□□□□□ -0.75
RAB11A-201ENST00000261890 HNRNPMP52272 730 aaKnown RBP eCLIP10.35□□□□□ -0.75
RAB11A-201ENST00000261890 WASHC2CQ9Y4E1 1318 aa10.35□□□□□ -0.75
RAB11A-201ENST00000261890 ZBTB7CA1YPR0 619 aa10.34□□□□□ -0.75
RAB11A-201ENST00000261890 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
RAB11A-201ENST00000261890 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
RAB11A-201ENST00000261890 NESP48681 1621 aa10.33□□□□□ -0.76
RAB11A-201ENST00000261890 SENP3Q9H4L4 574 aaPredicted RBP10.32□□□□□ -0.76
RAB11A-201ENST00000261890 MPHOSPH9Q99550 1183 aa10.32□□□□□ -0.76
RAB11A-201ENST00000261890 DNMBPQ6XZF7 1577 aa10.32□□□□□ -0.76
RAB11A-201ENST00000261890 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
RAB11A-201ENST00000261890 SIN3AQ96ST3 1273 aa10.3□□□□□ -0.76
RAB11A-201ENST00000261890 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
RAB11A-201ENST00000261890 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
RAB11A-201ENST00000261890 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
RAB11A-201ENST00000261890 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
RAB11A-201ENST00000261890 A0A0G2JS52 829 aa10.29□□□□□ -0.76
RAB11A-201ENST00000261890 SRPK2P78362 688 aaKnown RBP10.29□□□□□ -0.76
RAB11A-201ENST00000261890 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
RAB11A-201ENST00000261890 UACAQ9BZF9 1416 aa10.28□□□□□ -0.76
RAB11A-201ENST00000261890 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
RAB11A-201ENST00000261890 POLA1P09884 1462 aaPredicted RBP10.28□□□□□ -0.76
RAB11A-201ENST00000261890 HDGFL2Q7Z4V5 671 aaPredicted RBP10.28□□□□□ -0.76
RAB11A-201ENST00000261890 MYH16Q9H6N6 1097 aa10.28□□□□□ -0.76
RAB11A-201ENST00000261890 PRG4Q92954 1404 aaPredicted RBP10.27□□□□□ -0.76
RAB11A-201ENST00000261890 SYNJ2O15056 1496 aa10.27□□□□□ -0.77
RAB11A-201ENST00000261890 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms