RNA–Protein interactions for RNA: ENST00000254037.6

ZCCHC9-201, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 4,606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-201ENST00000254037 SUPT16HQ9Y5B9 1047 aaKnown RBP15.82■□□□□ 0.12
ZCCHC9-201ENST00000254037 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
ZCCHC9-201ENST00000254037 NCLP19338 710 aaKnown RBP15.81■□□□□ 0.12
ZCCHC9-201ENST00000254037 WDR43Q15061 677 aaKnown RBP eCLIP15.81■□□□□ 0.12
ZCCHC9-201ENST00000254037 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
ZCCHC9-201ENST00000254037 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
ZCCHC9-201ENST00000254037 FBLN2P98095 1184 aa15.79■□□□□ 0.12
ZCCHC9-201ENST00000254037 EEA1Q15075 1411 aa15.79■□□□□ 0.12
ZCCHC9-201ENST00000254037 CLIP1P30622 1438 aa15.78■□□□□ 0.12
ZCCHC9-201ENST00000254037 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
ZCCHC9-201ENST00000254037 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
ZCCHC9-201ENST00000254037 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
ZCCHC9-201ENST00000254037 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
ZCCHC9-201ENST00000254037 DEKP35659 375 aaKnown RBP15.75■□□□□ 0.11
ZCCHC9-201ENST00000254037 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
ZCCHC9-201ENST00000254037 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
ZCCHC9-201ENST00000254037 CHIC2Q9UKJ5 165 aa15.71■□□□□ 0.11
ZCCHC9-201ENST00000254037 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
ZCCHC9-201ENST00000254037 TPRNQ4KMQ1 711 aa15.7■□□□□ 0.1
ZCCHC9-201ENST00000254037 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
ZCCHC9-201ENST00000254037 MYH16Q9H6N6 1097 aa15.69■□□□□ 0.1
ZCCHC9-201ENST00000254037 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
ZCCHC9-201ENST00000254037 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
ZCCHC9-201ENST00000254037 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
ZCCHC9-201ENST00000254037 ARID4BQ4LE39 1312 aaPredicted RBP15.67■□□□□ 0.1
ZCCHC9-201ENST00000254037 EIF4G2P78344 907 aaKnown RBP eCLIP15.66■□□□□ 0.1
ZCCHC9-201ENST00000254037 PPP4R2Q9NY27 417 aa15.66■□□□□ 0.1
ZCCHC9-201ENST00000254037 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
ZCCHC9-201ENST00000254037 RGS3P49796 1198 aa15.65■□□□□ 0.1
ZCCHC9-201ENST00000254037 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
ZCCHC9-201ENST00000254037 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
ZCCHC9-201ENST00000254037 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
ZCCHC9-201ENST00000254037 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
ZCCHC9-201ENST00000254037 ZRSR1Q15695 479 aaKnown RBP15.59■□□□□ 0.09
ZCCHC9-201ENST00000254037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.085e-8■□□□□ 10.1
ZCCHC9-201ENST00000254037 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
ZCCHC9-201ENST00000254037 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
ZCCHC9-201ENST00000254037 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
ZCCHC9-201ENST00000254037 SOGA1O94964 1423 aa15.52■□□□□ 0.08
ZCCHC9-201ENST00000254037 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
ZCCHC9-201ENST00000254037 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
ZCCHC9-201ENST00000254037 ARID3AQ99856 593 aa15.49■□□□□ 0.07
ZCCHC9-201ENST00000254037 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
ZCCHC9-201ENST00000254037 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
ZCCHC9-201ENST00000254037 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
ZCCHC9-201ENST00000254037 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
ZCCHC9-201ENST00000254037 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
ZCCHC9-201ENST00000254037 L1TD1Q5T7N2 865 aaKnown RBP15.47■□□□□ 0.07
ZCCHC9-201ENST00000254037 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
ZCCHC9-201ENST00000254037 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
ZCCHC9-201ENST00000254037 FRAT1Q92837 279 aaPredicted RBP15.45■□□□□ 0.06
ZCCHC9-201ENST00000254037 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
ZCCHC9-201ENST00000254037 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
ZCCHC9-201ENST00000254037 RRP7BPQ9NSQ0 103 aa15.44■□□□□ 0.06
ZCCHC9-201ENST00000254037 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
ZCCHC9-201ENST00000254037 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
ZCCHC9-201ENST00000254037 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
ZCCHC9-201ENST00000254037 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
ZCCHC9-201ENST00000254037 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
ZCCHC9-201ENST00000254037 TSHZ2Q9NRE2 1034 aa15.41■□□□□ 0.06
ZCCHC9-201ENST00000254037 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
ZCCHC9-201ENST00000254037 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
ZCCHC9-201ENST00000254037 TAOK2Q9UL54 1235 aa15.4■□□□□ 0.06
ZCCHC9-201ENST00000254037 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
ZCCHC9-201ENST00000254037 GZF1Q9H116 711 aaPredicted RBP15.39■□□□□ 0.05
ZCCHC9-201ENST00000254037 NRDCO43847 1150 aa15.39■□□□□ 0.05
ZCCHC9-201ENST00000254037 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
ZCCHC9-201ENST00000254037 HSCBQ8IWL3 235 aa15.36■□□□□ 0.05
ZCCHC9-201ENST00000254037 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
ZCCHC9-201ENST00000254037 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
ZCCHC9-201ENST00000254037 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
ZCCHC9-201ENST00000254037 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
ZCCHC9-201ENST00000254037 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
ZCCHC9-201ENST00000254037 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
ZCCHC9-201ENST00000254037 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
ZCCHC9-201ENST00000254037 WIZO95785 1651 aa15.34■□□□□ 0.05
ZCCHC9-201ENST00000254037 A0A0G2JS52 829 aa15.33■□□□□ 0.04
ZCCHC9-201ENST00000254037 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
ZCCHC9-201ENST00000254037 FGD1P98174 961 aa15.31■□□□□ 0.04
ZCCHC9-201ENST00000254037 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
ZCCHC9-201ENST00000254037 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
ZCCHC9-201ENST00000254037 DRC7Q8IY82 874 aa15.3■□□□□ 0.04
ZCCHC9-201ENST00000254037 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
ZCCHC9-201ENST00000254037 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
ZCCHC9-201ENST00000254037 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
ZCCHC9-201ENST00000254037 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
ZCCHC9-201ENST00000254037 KCNJ4P48050 445 aa15.28■□□□□ 0.04
ZCCHC9-201ENST00000254037 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
ZCCHC9-201ENST00000254037 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.03
ZCCHC9-201ENST00000254037 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
ZCCHC9-201ENST00000254037 CUX2O14529 1486 aa15.26■□□□□ 0.03
ZCCHC9-201ENST00000254037 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
ZCCHC9-201ENST00000254037 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
ZCCHC9-201ENST00000254037 C14orf37Q86TY3 774 aa15.24■□□□□ 0.03
ZCCHC9-201ENST00000254037 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
ZCCHC9-201ENST00000254037 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
ZCCHC9-201ENST00000254037 CDCA8Q53HL2 280 aa15.23■□□□□ 0.03
ZCCHC9-201ENST00000254037 IPO9Q96P70 1041 aaKnown RBP15.23■□□□□ 0.03
ZCCHC9-201ENST00000254037 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
ZCCHC9-201ENST00000254037 GBP4Q96PP9 640 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms