RNA–Protein interactions for RNA: ENST00000251879.10

RIC1-201, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 1 (best) BASIC

Gene RIC1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-201ENST00000251879 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
RIC1-201ENST00000251879 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
RIC1-201ENST00000251879 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
RIC1-201ENST00000251879 EEA1Q15075 1411 aa19.99■□□□□ 0.79
RIC1-201ENST00000251879 CCDC136Q96JN2 1154 aa19.98■□□□□ 0.79
RIC1-201ENST00000251879 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
RIC1-201ENST00000251879 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
RIC1-201ENST00000251879 ARXQ96QS3 562 aa19.94■□□□□ 0.78
RIC1-201ENST00000251879 CUX2O14529 1486 aa19.94■□□□□ 0.78
RIC1-201ENST00000251879 ZNF777Q9ULD5 760 aaPredicted RBP19.94■□□□□ 0.78
RIC1-201ENST00000251879 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
RIC1-201ENST00000251879 RTN4Q9NQC3 1192 aaKnown RBP19.9■□□□□ 0.78
RIC1-201ENST00000251879 ZBTB47Q9UFB7 747 aaPredicted RBP19.9■□□□□ 0.78
RIC1-201ENST00000251879 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
RIC1-201ENST00000251879 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
RIC1-201ENST00000251879 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
RIC1-201ENST00000251879 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
RIC1-201ENST00000251879 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
RIC1-201ENST00000251879 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
RIC1-201ENST00000251879 B4GALNT3Q6L9W6 998 aa19.83■□□□□ 0.76
RIC1-201ENST00000251879 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
RIC1-201ENST00000251879 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
RIC1-201ENST00000251879 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
RIC1-201ENST00000251879 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
RIC1-201ENST00000251879 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
RIC1-201ENST00000251879 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
RIC1-201ENST00000251879 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
RIC1-201ENST00000251879 KDM2AQ9Y2K7 1162 aa19.76■□□□□ 0.75
RIC1-201ENST00000251879 NESP48681 1621 aa19.76■□□□□ 0.75
RIC1-201ENST00000251879 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
RIC1-201ENST00000251879 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
RIC1-201ENST00000251879 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
RIC1-201ENST00000251879 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
RIC1-201ENST00000251879 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
RIC1-201ENST00000251879 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
RIC1-201ENST00000251879 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
RIC1-201ENST00000251879 PDS5BQ9NTI5 1447 aa19.65■□□□□ 0.74
RIC1-201ENST00000251879 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
RIC1-201ENST00000251879 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
RIC1-201ENST00000251879 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
RIC1-201ENST00000251879 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
RIC1-201ENST00000251879 CFTRP13569 1480 aa19.57■□□□□ 0.72
RIC1-201ENST00000251879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.725e-6■□□□□ 9.4
RIC1-201ENST00000251879 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
RIC1-201ENST00000251879 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
RIC1-201ENST00000251879 IGF1RP08069 1367 aa19.52■□□□□ 0.72
RIC1-201ENST00000251879 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
RIC1-201ENST00000251879 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
RIC1-201ENST00000251879 NEFMP07197 916 aa19.49■□□□□ 0.71
RIC1-201ENST00000251879 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
RIC1-201ENST00000251879 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
RIC1-201ENST00000251879 CUX1P39880 1505 aa19.47■□□□□ 0.71
RIC1-201ENST00000251879 FHOD3Q2V2M9 1422 aa19.46■□□□□ 0.71
RIC1-201ENST00000251879 RGL3Q3MIN7 710 aa19.46■□□□□ 0.71
RIC1-201ENST00000251879 FOXD1Q16676 465 aa19.44■□□□□ 0.7
RIC1-201ENST00000251879 HSP90AA1P07900 732 aaKnown RBP19.44■□□□□ 0.7
RIC1-201ENST00000251879 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
RIC1-201ENST00000251879 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
RIC1-201ENST00000251879 RGS3P49796 1198 aa19.41■□□□□ 0.7
RIC1-201ENST00000251879 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
RIC1-201ENST00000251879 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.4■□□□□ 0.7
RIC1-201ENST00000251879 KIF21BO75037 1637 aa19.39■□□□□ 0.69
RIC1-201ENST00000251879 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.693e-6■■■■■ 36.4
RIC1-201ENST00000251879 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
RIC1-201ENST00000251879 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
RIC1-201ENST00000251879 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
RIC1-201ENST00000251879 HSPA5P11021 654 aaKnown RBP19.34■□□□□ 0.69
RIC1-201ENST00000251879 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
RIC1-201ENST00000251879 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
RIC1-201ENST00000251879 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.3■□□□□ 0.68
RIC1-201ENST00000251879 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
RIC1-201ENST00000251879 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
RIC1-201ENST00000251879 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
RIC1-201ENST00000251879 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
RIC1-201ENST00000251879 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
RIC1-201ENST00000251879 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
RIC1-201ENST00000251879 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
RIC1-201ENST00000251879 CC2D1BQ5T0F9 858 aaKnown RBP19.26■□□□□ 0.67
RIC1-201ENST00000251879 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
RIC1-201ENST00000251879 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
RIC1-201ENST00000251879 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
RIC1-201ENST00000251879 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
RIC1-201ENST00000251879 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
RIC1-201ENST00000251879 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
RIC1-201ENST00000251879 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
RIC1-201ENST00000251879 JPH4Q96JJ6 628 aa19.21■□□□□ 0.67
RIC1-201ENST00000251879 ANP32BQ92688 251 aaKnown RBP19.19■□□□□ 0.66
RIC1-201ENST00000251879 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
RIC1-201ENST00000251879 SPRYD3Q8NCJ5 442 aa19.19■□□□□ 0.66
RIC1-201ENST00000251879 ARID4BQ4LE39 1312 aaPredicted RBP19.18■□□□□ 0.66
RIC1-201ENST00000251879 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
RIC1-201ENST00000251879 FRAT1Q92837 279 aaPredicted RBP19.16■□□□□ 0.66
RIC1-201ENST00000251879 TNNT2P45379 298 aaPredicted RBP19.15■□□□□ 0.66
RIC1-201ENST00000251879 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
RIC1-201ENST00000251879 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
RIC1-201ENST00000251879 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
RIC1-201ENST00000251879 TPRNQ4KMQ1 711 aa19.13■□□□□ 0.65
RIC1-201ENST00000251879 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
RIC1-201ENST00000251879 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
RIC1-201ENST00000251879 NAP1L5Q96NT1 182 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms