RNA–Protein interactions for RNA: ENST00000251879.10

RIC1-201, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 1 (best) BASIC

Gene RIC1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-201ENST00000251879 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
RIC1-201ENST00000251879 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
RIC1-201ENST00000251879 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
RIC1-201ENST00000251879 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
RIC1-201ENST00000251879 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
RIC1-201ENST00000251879 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
RIC1-201ENST00000251879 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
RIC1-201ENST00000251879 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
RIC1-201ENST00000251879 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
RIC1-201ENST00000251879 HRCP23327 699 aa22.89■■□□□ 1.26
RIC1-201ENST00000251879 ABCC9O60706 1549 aa22.79■■□□□ 1.24
RIC1-201ENST00000251879 LOC105371045A0A1W2PR82 267 aa22.73■■□□□ 1.23
RIC1-201ENST00000251879 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
RIC1-201ENST00000251879 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
RIC1-201ENST00000251879 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
RIC1-201ENST00000251879 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
RIC1-201ENST00000251879 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
RIC1-201ENST00000251879 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
RIC1-201ENST00000251879 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
RIC1-201ENST00000251879 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
RIC1-201ENST00000251879 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
RIC1-201ENST00000251879 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
RIC1-201ENST00000251879 APLP2Q06481 763 aa22.31■■□□□ 1.16
RIC1-201ENST00000251879 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
RIC1-201ENST00000251879 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
RIC1-201ENST00000251879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.12
RIC1-201ENST00000251879 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.12
RIC1-201ENST00000251879 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
RIC1-201ENST00000251879 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
RIC1-201ENST00000251879 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
RIC1-201ENST00000251879 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
RIC1-201ENST00000251879 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
RIC1-201ENST00000251879 ATP1B4Q9UN42 357 aaPredicted RBP21.77■■□□□ 1.08
RIC1-201ENST00000251879 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.08
RIC1-201ENST00000251879 ITGAEP38570 1179 aa21.68■■□□□ 1.06
RIC1-201ENST00000251879 MYT1Q01538 1121 aa21.65■■□□□ 1.06
RIC1-201ENST00000251879 NEFLP07196 543 aa21.57■■□□□ 1.04
RIC1-201ENST00000251879 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
RIC1-201ENST00000251879 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
RIC1-201ENST00000251879 CNGB1Q14028 1251 aaPredicted RBP21.43■■□□□ 1.02
RIC1-201ENST00000251879 BCANQ96GW7 911 aa21.43■■□□□ 1.02
RIC1-201ENST00000251879 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
RIC1-201ENST00000251879 NEUROD1Q13562 356 aa21.33■■□□□ 1.01
RIC1-201ENST00000251879 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
RIC1-201ENST00000251879 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
RIC1-201ENST00000251879 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
RIC1-201ENST00000251879 NACADO15069 1562 aa21.28■■□□□ 1
RIC1-201ENST00000251879 POLR3GLQ9BT43 218 aa21.16■□□□□ 0.98
RIC1-201ENST00000251879 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
RIC1-201ENST00000251879 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
RIC1-201ENST00000251879 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
RIC1-201ENST00000251879 MIER1Q8N108 512 aa20.85■□□□□ 0.93
RIC1-201ENST00000251879 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
RIC1-201ENST00000251879 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
RIC1-201ENST00000251879 WIZO95785 1651 aa20.72■□□□□ 0.91
RIC1-201ENST00000251879 FKBP8Q14318 412 aa20.72■□□□□ 0.91
RIC1-201ENST00000251879 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
RIC1-201ENST00000251879 ANP32CO43423 234 aa20.61■□□□□ 0.89
RIC1-201ENST00000251879 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
RIC1-201ENST00000251879 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
RIC1-201ENST00000251879 TRIM52Q96A61 297 aa20.61■□□□□ 0.89
RIC1-201ENST00000251879 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
RIC1-201ENST00000251879 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
RIC1-201ENST00000251879 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
RIC1-201ENST00000251879 CDK11AQ9UQ88 783 aaPredicted RBP20.56■□□□□ 0.88
RIC1-201ENST00000251879 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
RIC1-201ENST00000251879 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
RIC1-201ENST00000251879 IRX6P78412 446 aaPredicted RBP20.51■□□□□ 0.87
RIC1-201ENST00000251879 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
RIC1-201ENST00000251879 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
RIC1-201ENST00000251879 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
RIC1-201ENST00000251879 FBLN2P98095 1184 aa20.41■□□□□ 0.86
RIC1-201ENST00000251879 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
RIC1-201ENST00000251879 SOGA1O94964 1423 aa20.38■□□□□ 0.85
RIC1-201ENST00000251879 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
RIC1-201ENST00000251879 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
RIC1-201ENST00000251879 CLSPNQ9HAW4 1339 aa20.36■□□□□ 0.85
RIC1-201ENST00000251879 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
RIC1-201ENST00000251879 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
RIC1-201ENST00000251879 NBR1Q14596 966 aa20.34■□□□□ 0.85
RIC1-201ENST00000251879 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
RIC1-201ENST00000251879 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
RIC1-201ENST00000251879 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
RIC1-201ENST00000251879 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
RIC1-201ENST00000251879 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
RIC1-201ENST00000251879 MYT1LQ9UL68 1186 aa20.22■□□□□ 0.83
RIC1-201ENST00000251879 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
RIC1-201ENST00000251879 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
RIC1-201ENST00000251879 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
RIC1-201ENST00000251879 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
RIC1-201ENST00000251879 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
RIC1-201ENST00000251879 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
RIC1-201ENST00000251879 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
RIC1-201ENST00000251879 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
RIC1-201ENST00000251879 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
RIC1-201ENST00000251879 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
RIC1-201ENST00000251879 CLIP1P30622 1438 aa20.06■□□□□ 0.8
RIC1-201ENST00000251879 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
RIC1-201ENST00000251879 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
RIC1-201ENST00000251879 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms