RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 POLR3GLQ9BT43 218 aa23.68■■□□□ 1.38
SGPP1-201ENST00000247225 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
SGPP1-201ENST00000247225 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
SGPP1-201ENST00000247225 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
SGPP1-201ENST00000247225 PHLDB1Q86UU1 1377 aa23.65■■□□□ 1.38
SGPP1-201ENST00000247225 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
SGPP1-201ENST00000247225 RRBP1Q9P2E9 1410 aaKnown RBP23.65■■□□□ 1.38
SGPP1-201ENST00000247225 CUX2O14529 1486 aa23.64■■□□□ 1.38
SGPP1-201ENST00000247225 TONSLQ96HA7 1378 aa23.63■■□□□ 1.37
SGPP1-201ENST00000247225 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
SGPP1-201ENST00000247225 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
SGPP1-201ENST00000247225 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
SGPP1-201ENST00000247225 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
SGPP1-201ENST00000247225 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.36
SGPP1-201ENST00000247225 TOP2BQ02880 1626 aa23.56■■□□□ 1.36
SGPP1-201ENST00000247225 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
SGPP1-201ENST00000247225 CUX1P39880 1505 aa23.54■■□□□ 1.36
SGPP1-201ENST00000247225 IGF1RP08069 1367 aa23.53■■□□□ 1.36
SGPP1-201ENST00000247225 FOXD1Q16676 465 aa23.51■■□□□ 1.35
SGPP1-201ENST00000247225 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
SGPP1-201ENST00000247225 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
SGPP1-201ENST00000247225 MAPKBP1O60336 1514 aa23.47■■□□□ 1.35
SGPP1-201ENST00000247225 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
SGPP1-201ENST00000247225 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
SGPP1-201ENST00000247225 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
SGPP1-201ENST00000247225 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
SGPP1-201ENST00000247225 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
SGPP1-201ENST00000247225 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
SGPP1-201ENST00000247225 CCER2I3L3R5 266 aa23.39■■□□□ 1.34
SGPP1-201ENST00000247225 MSH5O43196 834 aa23.38■■□□□ 1.33
SGPP1-201ENST00000247225 LRRC9Q6ZRR7 1453 aa23.37■■□□□ 1.33
SGPP1-201ENST00000247225 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
SGPP1-201ENST00000247225 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
SGPP1-201ENST00000247225 NBR1Q14596 966 aa23.29■■□□□ 1.32
SGPP1-201ENST00000247225 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
SGPP1-201ENST00000247225 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
SGPP1-201ENST00000247225 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
SGPP1-201ENST00000247225 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
SGPP1-201ENST00000247225 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
SGPP1-201ENST00000247225 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
SGPP1-201ENST00000247225 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
SGPP1-201ENST00000247225 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
SGPP1-201ENST00000247225 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
SGPP1-201ENST00000247225 CFTRP13569 1480 aa23.19■■□□□ 1.3
SGPP1-201ENST00000247225 L3MBTL2Q969R5 705 aa23.18■■□□□ 1.3
SGPP1-201ENST00000247225 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
SGPP1-201ENST00000247225 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
SGPP1-201ENST00000247225 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
SGPP1-201ENST00000247225 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
SGPP1-201ENST00000247225 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
SGPP1-201ENST00000247225 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
SGPP1-201ENST00000247225 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
SGPP1-201ENST00000247225 PPP4R2Q9NY27 417 aa23.1■■□□□ 1.29
SGPP1-201ENST00000247225 FGD6Q6ZV73 1430 aa23.09■■□□□ 1.29
SGPP1-201ENST00000247225 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
SGPP1-201ENST00000247225 MPHOSPH9Q99550 1183 aa23.08■■□□□ 1.29
SGPP1-201ENST00000247225 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
SGPP1-201ENST00000247225 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.28
SGPP1-201ENST00000247225 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
SGPP1-201ENST00000247225 PRKRIP1Q9H875 184 aaPredicted RBP23.04■■□□□ 1.28
SGPP1-201ENST00000247225 CCDC136Q96JN2 1154 aa23.01■■□□□ 1.27
SGPP1-201ENST00000247225 KDM2AQ9Y2K7 1162 aa23■■□□□ 1.27
SGPP1-201ENST00000247225 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
SGPP1-201ENST00000247225 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
SGPP1-201ENST00000247225 ZNF644Q9H582 1327 aaPredicted RBP22.97■■□□□ 1.27
SGPP1-201ENST00000247225 DEKP35659 375 aaKnown RBP22.95■■□□□ 1.26
SGPP1-201ENST00000247225 NAIPQ13075 1403 aa22.95■■□□□ 1.26
SGPP1-201ENST00000247225 PAK3O75914 559 aaPredicted RBP22.94■■□□□ 1.26
SGPP1-201ENST00000247225 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
SGPP1-201ENST00000247225 NESP48681 1621 aa22.94■■□□□ 1.26
SGPP1-201ENST00000247225 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
SGPP1-201ENST00000247225 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
SGPP1-201ENST00000247225 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
SGPP1-201ENST00000247225 FANCIQ9NVI1 1328 aa22.91■■□□□ 1.26
SGPP1-201ENST00000247225 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
SGPP1-201ENST00000247225 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
SGPP1-201ENST00000247225 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
SGPP1-201ENST00000247225 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
SGPP1-201ENST00000247225 KIF7Q2M1P5 1343 aa22.87■■□□□ 1.25
SGPP1-201ENST00000247225 FBLN2P98095 1184 aa22.86■■□□□ 1.25
SGPP1-201ENST00000247225 NOP58Q9Y2X3 529 aaKnown RBP22.85■■□□□ 1.25
SGPP1-201ENST00000247225 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
SGPP1-201ENST00000247225 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
SGPP1-201ENST00000247225 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
SGPP1-201ENST00000247225 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
SGPP1-201ENST00000247225 FYCO1Q9BQS8 1478 aa22.84■■□□□ 1.25
SGPP1-201ENST00000247225 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
SGPP1-201ENST00000247225 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
SGPP1-201ENST00000247225 RTL5Q5HYW3 569 aaPredicted RBP22.8■■□□□ 1.24
SGPP1-201ENST00000247225 ZBED9Q6R2W3 1325 aa22.79■■□□□ 1.24
SGPP1-201ENST00000247225 CNTLNQ9NXG0 1405 aa22.78■■□□□ 1.24
SGPP1-201ENST00000247225 ZBTB47Q9UFB7 747 aaPredicted RBP22.77■■□□□ 1.24
SGPP1-201ENST00000247225 LAS1LQ9Y4W2 734 aaKnown RBP22.77■■□□□ 1.24
SGPP1-201ENST00000247225 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
SGPP1-201ENST00000247225 PTPN23Q9H3S7 1636 aa22.75■■□□□ 1.23
SGPP1-201ENST00000247225 PKD2Q13563 968 aa22.73■■□□□ 1.23
SGPP1-201ENST00000247225 SKAP1Q86WV1 359 aa22.72■■□□□ 1.23
SGPP1-201ENST00000247225 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
SGPP1-201ENST00000247225 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
SGPP1-201ENST00000247225 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms