RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
SYMPK-201ENST00000245934 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
SYMPK-201ENST00000245934 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
SYMPK-201ENST00000245934 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
SYMPK-201ENST00000245934 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
SYMPK-201ENST00000245934 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
SYMPK-201ENST00000245934 FKBP8Q14318 412 aa17.86■□□□□ 0.45
SYMPK-201ENST00000245934 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
SYMPK-201ENST00000245934 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
SYMPK-201ENST00000245934 ANP32EQ9BTT0 268 aa17.84■□□□□ 0.45
SYMPK-201ENST00000245934 KIF27Q86VH2 1401 aa17.83■□□□□ 0.45
SYMPK-201ENST00000245934 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.45
SYMPK-201ENST00000245934 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
SYMPK-201ENST00000245934 TSPY4P0CV99 314 aa17.77■□□□□ 0.44
SYMPK-201ENST00000245934 TSPY10P0CW01 314 aa17.77■□□□□ 0.44
SYMPK-201ENST00000245934 CUX2O14529 1486 aa17.77■□□□□ 0.43
SYMPK-201ENST00000245934 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
SYMPK-201ENST00000245934 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
SYMPK-201ENST00000245934 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
SYMPK-201ENST00000245934 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
SYMPK-201ENST00000245934 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
SYMPK-201ENST00000245934 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
SYMPK-201ENST00000245934 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
SYMPK-201ENST00000245934 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
SYMPK-201ENST00000245934 FOXD1Q16676 465 aa17.66■□□□□ 0.42
SYMPK-201ENST00000245934 PLEKHD1A6NEE1 506 aa17.66■□□□□ 0.42
SYMPK-201ENST00000245934 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
SYMPK-201ENST00000245934 NBR1Q14596 966 aa17.63■□□□□ 0.41
SYMPK-201ENST00000245934 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
SYMPK-201ENST00000245934 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
SYMPK-201ENST00000245934 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
SYMPK-201ENST00000245934 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
SYMPK-201ENST00000245934 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
SYMPK-201ENST00000245934 EIF4G2P78344 907 aaKnown RBP eCLIP17.58■□□□□ 0.412e-7■■■■■ 34.2
SYMPK-201ENST00000245934 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
SYMPK-201ENST00000245934 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
SYMPK-201ENST00000245934 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
SYMPK-201ENST00000245934 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
SYMPK-201ENST00000245934 CCNB3Q8WWL7 1395 aa17.55■□□□□ 0.4
SYMPK-201ENST00000245934 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
SYMPK-201ENST00000245934 NESP48681 1621 aa17.52■□□□□ 0.39
SYMPK-201ENST00000245934 CFTRP13569 1480 aa17.52■□□□□ 0.39
SYMPK-201ENST00000245934 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
SYMPK-201ENST00000245934 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
SYMPK-201ENST00000245934 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
SYMPK-201ENST00000245934 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
SYMPK-201ENST00000245934 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
SYMPK-201ENST00000245934 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
SYMPK-201ENST00000245934 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
SYMPK-201ENST00000245934 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
SYMPK-201ENST00000245934 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
SYMPK-201ENST00000245934 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
SYMPK-201ENST00000245934 CUX1P39880 1505 aa17.42■□□□□ 0.38
SYMPK-201ENST00000245934 RTN4Q9NQC3 1192 aaKnown RBP17.42■□□□□ 0.38
SYMPK-201ENST00000245934 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
SYMPK-201ENST00000245934 IGF1RP08069 1367 aa17.42■□□□□ 0.38
SYMPK-201ENST00000245934 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
SYMPK-201ENST00000245934 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
SYMPK-201ENST00000245934 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
SYMPK-201ENST00000245934 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
SYMPK-201ENST00000245934 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
SYMPK-201ENST00000245934 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
SYMPK-201ENST00000245934 NEFMP07197 916 aa17.36■□□□□ 0.37
SYMPK-201ENST00000245934 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
SYMPK-201ENST00000245934 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.363e-6■■■■□ 24.6
SYMPK-201ENST00000245934 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
SYMPK-201ENST00000245934 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
SYMPK-201ENST00000245934 PKD2Q13563 968 aa17.3■□□□□ 0.36
SYMPK-201ENST00000245934 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
SYMPK-201ENST00000245934 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
SYMPK-201ENST00000245934 MLECQ14165 292 aa17.28■□□□□ 0.36
SYMPK-201ENST00000245934 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYMPK-201ENST00000245934 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
SYMPK-201ENST00000245934 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
SYMPK-201ENST00000245934 KIF21BO75037 1637 aa17.26■□□□□ 0.35
SYMPK-201ENST00000245934 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
SYMPK-201ENST00000245934 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
SYMPK-201ENST00000245934 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
SYMPK-201ENST00000245934 GGT6Q6P531 493 aa17.23■□□□□ 0.35
SYMPK-201ENST00000245934 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
SYMPK-201ENST00000245934 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
SYMPK-201ENST00000245934 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.35
SYMPK-201ENST00000245934 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
SYMPK-201ENST00000245934 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
SYMPK-201ENST00000245934 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
SYMPK-201ENST00000245934 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
SYMPK-201ENST00000245934 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
SYMPK-201ENST00000245934 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
SYMPK-201ENST00000245934 AQRO60306 1485 aaKnown RBP eCLIP17.2■□□□□ 0.346e-7■■■■■ 33.3
SYMPK-201ENST00000245934 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
SYMPK-201ENST00000245934 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
SYMPK-201ENST00000245934 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
SYMPK-201ENST00000245934 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
SYMPK-201ENST00000245934 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
SYMPK-201ENST00000245934 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
SYMPK-201ENST00000245934 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
SYMPK-201ENST00000245934 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
SYMPK-201ENST00000245934 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
SYMPK-201ENST00000245934 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-201ENST00000245934 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms