RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 SETD5Q9C0A6 1442 aa20.3■□□□□ 0.84
LTBP4-202ENST00000243562 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
LTBP4-202ENST00000243562 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
LTBP4-202ENST00000243562 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.83
LTBP4-202ENST00000243562 TIAM1Q13009 1591 aa20.26■□□□□ 0.83
LTBP4-202ENST00000243562 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
LTBP4-202ENST00000243562 LRRC9Q6ZRR7 1453 aa20.25■□□□□ 0.83
LTBP4-202ENST00000243562 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
LTBP4-202ENST00000243562 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
LTBP4-202ENST00000243562 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
LTBP4-202ENST00000243562 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
LTBP4-202ENST00000243562 BCANQ96GW7 911 aa20.16■□□□□ 0.82
LTBP4-202ENST00000243562 FHOD3Q2V2M9 1422 aa20.14■□□□□ 0.82
LTBP4-202ENST00000243562 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
LTBP4-202ENST00000243562 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
LTBP4-202ENST00000243562 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
LTBP4-202ENST00000243562 FKBP8Q14318 412 aa20.08■□□□□ 0.81
LTBP4-202ENST00000243562 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
LTBP4-202ENST00000243562 PCF11O94913 1555 aaKnown RBP20.08■□□□□ 0.8
LTBP4-202ENST00000243562 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.8
LTBP4-202ENST00000243562 PRDM2Q13029 1718 aa20.08■□□□□ 0.8
LTBP4-202ENST00000243562 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
LTBP4-202ENST00000243562 ANP32CO43423 234 aa20.07■□□□□ 0.8
LTBP4-202ENST00000243562 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
LTBP4-202ENST00000243562 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
LTBP4-202ENST00000243562 NEFLP07196 543 aa20.02■□□□□ 0.79
LTBP4-202ENST00000243562 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
LTBP4-202ENST00000243562 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
LTBP4-202ENST00000243562 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
LTBP4-202ENST00000243562 CFAP43Q8NDM7 1665 aa19.98■□□□□ 0.79
LTBP4-202ENST00000243562 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
LTBP4-202ENST00000243562 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
LTBP4-202ENST00000243562 FGD6Q6ZV73 1430 aa19.94■□□□□ 0.78
LTBP4-202ENST00000243562 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
LTBP4-202ENST00000243562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.93■□□□□ 0.78
LTBP4-202ENST00000243562 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
LTBP4-202ENST00000243562 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
LTBP4-202ENST00000243562 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
LTBP4-202ENST00000243562 CC2D2AQ9P2K1 1620 aa19.92■□□□□ 0.78
LTBP4-202ENST00000243562 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
LTBP4-202ENST00000243562 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
LTBP4-202ENST00000243562 NESP48681 1621 aa19.9■□□□□ 0.78
LTBP4-202ENST00000243562 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.787e-7■■■□□ 15.4
LTBP4-202ENST00000243562 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
LTBP4-202ENST00000243562 ERICH6Q7L0X2 663 aa19.87■□□□□ 0.77
LTBP4-202ENST00000243562 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
LTBP4-202ENST00000243562 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
LTBP4-202ENST00000243562 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
LTBP4-202ENST00000243562 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
LTBP4-202ENST00000243562 HFM1A2PYH4 1435 aa19.83■□□□□ 0.76
LTBP4-202ENST00000243562 CUL7Q14999 1698 aa19.81■□□□□ 0.76
LTBP4-202ENST00000243562 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
LTBP4-202ENST00000243562 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
LTBP4-202ENST00000243562 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
LTBP4-202ENST00000243562 NAIPQ13075 1403 aa19.79■□□□□ 0.76
LTBP4-202ENST00000243562 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
LTBP4-202ENST00000243562 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
LTBP4-202ENST00000243562 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
LTBP4-202ENST00000243562 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
LTBP4-202ENST00000243562 PTPN23Q9H3S7 1636 aa19.75■□□□□ 0.75
LTBP4-202ENST00000243562 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
LTBP4-202ENST00000243562 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
LTBP4-202ENST00000243562 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
LTBP4-202ENST00000243562 RBM19Q9Y4C8 960 aaKnown RBP19.72■□□□□ 0.75
LTBP4-202ENST00000243562 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
LTBP4-202ENST00000243562 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
LTBP4-202ENST00000243562 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
LTBP4-202ENST00000243562 FOXD1Q16676 465 aa19.67■□□□□ 0.74
LTBP4-202ENST00000243562 WASHC2AQ641Q2 1341 aa19.67■□□□□ 0.74
LTBP4-202ENST00000243562 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
LTBP4-202ENST00000243562 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
LTBP4-202ENST00000243562 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
LTBP4-202ENST00000243562 SAMD9Q5K651 1589 aa19.65■□□□□ 0.74
LTBP4-202ENST00000243562 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
LTBP4-202ENST00000243562 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
LTBP4-202ENST00000243562 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
LTBP4-202ENST00000243562 UGGT2Q9NYU1 1516 aa19.6■□□□□ 0.73
LTBP4-202ENST00000243562 FAM9BQ8IZU0 186 aa19.59■□□□□ 0.73
LTBP4-202ENST00000243562 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
LTBP4-202ENST00000243562 MAGI3Q5TCQ9 1506 aa19.58■□□□□ 0.72
LTBP4-202ENST00000243562 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
LTBP4-202ENST00000243562 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.72
LTBP4-202ENST00000243562 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
LTBP4-202ENST00000243562 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
LTBP4-202ENST00000243562 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
LTBP4-202ENST00000243562 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
LTBP4-202ENST00000243562 C11orf95C9JLR9 678 aaPredicted RBP19.54■□□□□ 0.72
LTBP4-202ENST00000243562 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
LTBP4-202ENST00000243562 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
LTBP4-202ENST00000243562 EPRSP07814 1512 aaKnown RBP19.52■□□□□ 0.71
LTBP4-202ENST00000243562 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
LTBP4-202ENST00000243562 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
LTBP4-202ENST00000243562 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
LTBP4-202ENST00000243562 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
LTBP4-202ENST00000243562 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
LTBP4-202ENST00000243562 PRKRIP1Q9H875 184 aaPredicted RBP19.5■□□□□ 0.71
LTBP4-202ENST00000243562 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
LTBP4-202ENST00000243562 KDM6BO15054 1643 aa19.49■□□□□ 0.71
LTBP4-202ENST00000243562 NBPF8Q3BBV2 869 aa19.49■□□□□ 0.71
LTBP4-202ENST00000243562 POLR3GLQ9BT43 218 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms