RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CADPSQ9ULU8 1353 aa15.14■□□□□ 0.01
COPA-201ENST00000241704 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
COPA-201ENST00000241704 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
COPA-201ENST00000241704 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
COPA-201ENST00000241704 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
COPA-201ENST00000241704 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
COPA-201ENST00000241704 RBM19Q9Y4C8 960 aaKnown RBP15.08■□□□□ 0
COPA-201ENST00000241704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 09e-9■■■■□ 20.8
COPA-201ENST00000241704 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
COPA-201ENST00000241704 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
COPA-201ENST00000241704 SLC24A1O60721 1099 aa15.02■□□□□ -0
COPA-201ENST00000241704 VPS8Q8N3P4 1428 aa15.02□□□□□ -0.01
COPA-201ENST00000241704 RRP7BPQ9NSQ0 103 aa14.99□□□□□ -0.01
COPA-201ENST00000241704 NEFMP07197 916 aa14.98□□□□□ -0.01
COPA-201ENST00000241704 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
COPA-201ENST00000241704 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
COPA-201ENST00000241704 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
COPA-201ENST00000241704 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
COPA-201ENST00000241704 NBR1Q14596 966 aa14.96□□□□□ -0.02
COPA-201ENST00000241704 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
COPA-201ENST00000241704 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
COPA-201ENST00000241704 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
COPA-201ENST00000241704 CCNB3Q8WWL7 1395 aa14.93□□□□□ -0.02
COPA-201ENST00000241704 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
COPA-201ENST00000241704 DAXXQ9UER7 740 aaPredicted RBP14.92□□□□□ -0.02
COPA-201ENST00000241704 ANP32AP39687 249 aaKnown RBP14.91□□□□□ -0.02
COPA-201ENST00000241704 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
COPA-201ENST00000241704 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
COPA-201ENST00000241704 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
COPA-201ENST00000241704 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
COPA-201ENST00000241704 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
COPA-201ENST00000241704 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
COPA-201ENST00000241704 PPP1R15AO75807 674 aaPredicted RBP14.84□□□□□ -0.03
COPA-201ENST00000241704 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
COPA-201ENST00000241704 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
COPA-201ENST00000241704 CARMIL2Q6F5E8 1435 aa14.8□□□□□ -0.04
COPA-201ENST00000241704 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
COPA-201ENST00000241704 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
COPA-201ENST00000241704 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
COPA-201ENST00000241704 C14orf37Q86TY3 774 aa14.79□□□□□ -0.04
COPA-201ENST00000241704 GLIPR1L2Q4G1C9 344 aa14.78□□□□□ -0.04
COPA-201ENST00000241704 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
COPA-201ENST00000241704 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
COPA-201ENST00000241704 FANCIQ9NVI1 1328 aa14.77□□□□□ -0.05
COPA-201ENST00000241704 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
COPA-201ENST00000241704 FGD5Q6ZNL6 1462 aa14.75□□□□□ -0.05
COPA-201ENST00000241704 IGF1RP08069 1367 aa14.75□□□□□ -0.05
COPA-201ENST00000241704 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
COPA-201ENST00000241704 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
COPA-201ENST00000241704 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
COPA-201ENST00000241704 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
COPA-201ENST00000241704 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
COPA-201ENST00000241704 CFTRP13569 1480 aa14.73□□□□□ -0.05
COPA-201ENST00000241704 IRX6P78412 446 aaPredicted RBP14.73□□□□□ -0.05
COPA-201ENST00000241704 SETD5Q9C0A6 1442 aa14.73□□□□□ -0.05
COPA-201ENST00000241704 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
COPA-201ENST00000241704 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.06
COPA-201ENST00000241704 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
COPA-201ENST00000241704 TIMELESSQ9UNS1 1208 aa14.7□□□□□ -0.06
COPA-201ENST00000241704 PLEKHG5O94827 1062 aa14.69□□□□□ -0.06
COPA-201ENST00000241704 FAM9BQ8IZU0 186 aa14.68□□□□□ -0.06
COPA-201ENST00000241704 RGL3Q3MIN7 710 aa14.68□□□□□ -0.06
COPA-201ENST00000241704 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
COPA-201ENST00000241704 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
COPA-201ENST00000241704 MLECQ14165 292 aa14.66□□□□□ -0.06
COPA-201ENST00000241704 TMC1Q8TDI8 760 aa14.66□□□□□ -0.06
COPA-201ENST00000241704 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
COPA-201ENST00000241704 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
COPA-201ENST00000241704 A0A0G2JS52 829 aa14.65□□□□□ -0.06
COPA-201ENST00000241704 CCDC136Q96JN2 1154 aa14.64□□□□□ -0.07
COPA-201ENST00000241704 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
COPA-201ENST00000241704 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
COPA-201ENST00000241704 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
COPA-201ENST00000241704 RAB3GAP2Q9H2M9 1393 aa14.63□□□□□ -0.07
COPA-201ENST00000241704 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
COPA-201ENST00000241704 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
COPA-201ENST00000241704 HAP1P54257 671 aaPredicted RBP14.61□□□□□ -0.07
COPA-201ENST00000241704 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
COPA-201ENST00000241704 CARD11Q9BXL7 1154 aa14.6□□□□□ -0.07
COPA-201ENST00000241704 CCER2I3L3R5 266 aa14.59□□□□□ -0.07
COPA-201ENST00000241704 CCDC18Q5T9S5 1454 aa14.57□□□□□ -0.08
COPA-201ENST00000241704 MSH5O43196 834 aa14.57□□□□□ -0.08
COPA-201ENST00000241704 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
COPA-201ENST00000241704 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
COPA-201ENST00000241704 KIF21BO75037 1637 aa14.55□□□□□ -0.08
COPA-201ENST00000241704 NESP48681 1621 aa14.55□□□□□ -0.08
COPA-201ENST00000241704 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
COPA-201ENST00000241704 ERICH3Q5RHP9 1530 aa14.54□□□□□ -0.08
COPA-201ENST00000241704 ANKRD30AQ9BXX3 1397 aa14.53□□□□□ -0.08
COPA-201ENST00000241704 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
COPA-201ENST00000241704 GGT6Q6P531 493 aa14.53□□□□□ -0.08
COPA-201ENST00000241704 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
COPA-201ENST00000241704 PKD2Q13563 968 aa14.53□□□□□ -0.08
COPA-201ENST00000241704 WDR43Q15061 677 aaKnown RBP eCLIP14.52□□□□□ -0.081e-6■■□□□ 11.8
COPA-201ENST00000241704 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.084e-7■■■■□ 24
COPA-201ENST00000241704 PPM1GO15355 546 aaPredicted RBP14.52□□□□□ -0.09
COPA-201ENST00000241704 CUX1P39880 1505 aa14.52□□□□□ -0.09
COPA-201ENST00000241704 RSPH4AQ5TD94 716 aa14.51□□□□□ -0.09
COPA-201ENST00000241704 KANK1Q14678 1352 aa14.51□□□□□ -0.09
COPA-201ENST00000241704 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms