RNA–Protein interactions for RNA: ENST00000239174.6

HOXB1-201, Transcript of homeobox B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB1, Length 2,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB1-201ENST00000239174 KANK4Q5T7N3 995 aaPredicted RBP25.18■■□□□ 1.62
HOXB1-201ENST00000239174 ERCC6Q03468 1493 aa25.16■■□□□ 1.62
HOXB1-201ENST00000239174 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
HOXB1-201ENST00000239174 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
HOXB1-201ENST00000239174 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
HOXB1-201ENST00000239174 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
HOXB1-201ENST00000239174 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
HOXB1-201ENST00000239174 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
HOXB1-201ENST00000239174 MAPKBP1O60336 1514 aa25.09■■□□□ 1.61
HOXB1-201ENST00000239174 MRC2Q9UBG0 1479 aa25.07■■□□□ 1.6
HOXB1-201ENST00000239174 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
HOXB1-201ENST00000239174 RAB3GAP2Q9H2M9 1393 aa25.02■■□□□ 1.6
HOXB1-201ENST00000239174 FKBP8Q14318 412 aa25.02■■□□□ 1.6
HOXB1-201ENST00000239174 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
HOXB1-201ENST00000239174 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
HOXB1-201ENST00000239174 RBM19Q9Y4C8 960 aaKnown RBP24.98■■□□□ 1.59
HOXB1-201ENST00000239174 NEFLP07196 543 aa24.98■■□□□ 1.59
HOXB1-201ENST00000239174 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
HOXB1-201ENST00000239174 SETD5Q9C0A6 1442 aa24.97■■□□□ 1.59
HOXB1-201ENST00000239174 TDRD9Q8NDG6 1382 aaKnown RBP24.96■■□□□ 1.59
HOXB1-201ENST00000239174 IGF1RP08069 1367 aa24.95■■□□□ 1.59
HOXB1-201ENST00000239174 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
HOXB1-201ENST00000239174 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
HOXB1-201ENST00000239174 WDR62O43379 1518 aa24.89■■□□□ 1.58
HOXB1-201ENST00000239174 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
HOXB1-201ENST00000239174 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
HOXB1-201ENST00000239174 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
HOXB1-201ENST00000239174 BCANQ96GW7 911 aa24.85■■□□□ 1.57
HOXB1-201ENST00000239174 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
HOXB1-201ENST00000239174 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
HOXB1-201ENST00000239174 FANCIQ9NVI1 1328 aa24.81■■□□□ 1.56
HOXB1-201ENST00000239174 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
HOXB1-201ENST00000239174 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
HOXB1-201ENST00000239174 ANP32CO43423 234 aa24.79■■□□□ 1.56
HOXB1-201ENST00000239174 GAPVD1Q14C86 1478 aa24.79■■□□□ 1.56
HOXB1-201ENST00000239174 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
HOXB1-201ENST00000239174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.78■■□□□ 1.56
HOXB1-201ENST00000239174 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
HOXB1-201ENST00000239174 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
HOXB1-201ENST00000239174 ERICH6BQ5W0A0 696 aa24.74■■□□□ 1.55
HOXB1-201ENST00000239174 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
HOXB1-201ENST00000239174 ITGAEP38570 1179 aa24.7■■□□□ 1.54
HOXB1-201ENST00000239174 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
HOXB1-201ENST00000239174 SIN3AQ96ST3 1273 aa24.68■■□□□ 1.54
HOXB1-201ENST00000239174 PHLDB1Q86UU1 1377 aa24.68■■□□□ 1.54
HOXB1-201ENST00000239174 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
HOXB1-201ENST00000239174 MSH5O43196 834 aa24.65■■□□□ 1.54
HOXB1-201ENST00000239174 CFAP43Q8NDM7 1665 aa24.64■■□□□ 1.54
HOXB1-201ENST00000239174 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
HOXB1-201ENST00000239174 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
HOXB1-201ENST00000239174 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
HOXB1-201ENST00000239174 CUL7Q14999 1698 aa24.56■■□□□ 1.52
HOXB1-201ENST00000239174 EIF4G3O43432 1585 aaKnown RBP24.52■■□□□ 1.52
HOXB1-201ENST00000239174 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
HOXB1-201ENST00000239174 FAM50AQ14320 339 aaKnown RBP24.5■■□□□ 1.51
HOXB1-201ENST00000239174 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
HOXB1-201ENST00000239174 FBLN2P98095 1184 aa24.47■■□□□ 1.51
HOXB1-201ENST00000239174 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
HOXB1-201ENST00000239174 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
HOXB1-201ENST00000239174 UACAQ9BZF9 1416 aa24.46■■□□□ 1.51
HOXB1-201ENST00000239174 PPP4R2Q9NY27 417 aa24.44■■□□□ 1.5
HOXB1-201ENST00000239174 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
HOXB1-201ENST00000239174 P3H3Q8IVL6 736 aa24.43■■□□□ 1.5
HOXB1-201ENST00000239174 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
HOXB1-201ENST00000239174 HFM1A2PYH4 1435 aa24.42■■□□□ 1.5
HOXB1-201ENST00000239174 CASKIN1Q8WXD9 1431 aa24.42■■□□□ 1.5
HOXB1-201ENST00000239174 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
HOXB1-201ENST00000239174 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
HOXB1-201ENST00000239174 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
HOXB1-201ENST00000239174 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
HOXB1-201ENST00000239174 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
HOXB1-201ENST00000239174 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
HOXB1-201ENST00000239174 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
HOXB1-201ENST00000239174 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
HOXB1-201ENST00000239174 NCOA2Q15596 1464 aa24.33■■□□□ 1.49
HOXB1-201ENST00000239174 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
HOXB1-201ENST00000239174 PTPN23Q9H3S7 1636 aa24.31■■□□□ 1.48
HOXB1-201ENST00000239174 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
HOXB1-201ENST00000239174 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
HOXB1-201ENST00000239174 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
HOXB1-201ENST00000239174 NAIPQ13075 1403 aa24.25■■□□□ 1.47
HOXB1-201ENST00000239174 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
HOXB1-201ENST00000239174 FHOD3Q2V2M9 1422 aa24.23■■□□□ 1.47
HOXB1-201ENST00000239174 WASHC2AQ641Q2 1341 aa24.23■■□□□ 1.47
HOXB1-201ENST00000239174 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
HOXB1-201ENST00000239174 ZBED9Q6R2W3 1325 aa24.22■■□□□ 1.47
HOXB1-201ENST00000239174 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
HOXB1-201ENST00000239174 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
HOXB1-201ENST00000239174 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
HOXB1-201ENST00000239174 DEKP35659 375 aaKnown RBP24.16■■□□□ 1.46
HOXB1-201ENST00000239174 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
HOXB1-201ENST00000239174 IQGAP2Q13576 1575 aa24.15■■□□□ 1.46
HOXB1-201ENST00000239174 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
HOXB1-201ENST00000239174 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.45
HOXB1-201ENST00000239174 AKNAQ7Z591 1439 aa24.14■■□□□ 1.45
HOXB1-201ENST00000239174 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
HOXB1-201ENST00000239174 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
HOXB1-201ENST00000239174 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
HOXB1-201ENST00000239174 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
HOXB1-201ENST00000239174 NOP58Q9Y2X3 529 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms