RNA–Protein interactions for RNA: ENST00000239174.6

HOXB1-201, Transcript of homeobox B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB1, Length 2,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB1-201ENST00000239174 NISCHQ9Y2I1 1504 aa35.23■■■■□ 3.23
HOXB1-201ENST00000239174 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
HOXB1-201ENST00000239174 HRCP23327 699 aa29.65■■■□□ 2.34
HOXB1-201ENST00000239174 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
HOXB1-201ENST00000239174 ZCCHC6Q5VYS8 1495 aaKnown RBP29.53■■■□□ 2.32
HOXB1-201ENST00000239174 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
HOXB1-201ENST00000239174 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
HOXB1-201ENST00000239174 ABCC9O60706 1549 aa29.36■■■□□ 2.29
HOXB1-201ENST00000239174 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
HOXB1-201ENST00000239174 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
HOXB1-201ENST00000239174 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
HOXB1-201ENST00000239174 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
HOXB1-201ENST00000239174 NACADO15069 1562 aa28.58■■■□□ 2.17
HOXB1-201ENST00000239174 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
HOXB1-201ENST00000239174 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
HOXB1-201ENST00000239174 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
HOXB1-201ENST00000239174 TRIM26Q12899 539 aaPredicted RBP28.39■■■□□ 2.14
HOXB1-201ENST00000239174 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
HOXB1-201ENST00000239174 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
HOXB1-201ENST00000239174 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
HOXB1-201ENST00000239174 PABPN1Q86U42 306 aaKnown RBP eCLIP27.82■■■□□ 2.04
HOXB1-201ENST00000239174 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
HOXB1-201ENST00000239174 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
HOXB1-201ENST00000239174 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
HOXB1-201ENST00000239174 RSF1Q96T23 1441 aaPredicted RBP27.51■■■□□ 2
HOXB1-201ENST00000239174 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
HOXB1-201ENST00000239174 TRIM41Q8WV44 630 aa27.45■■□□□ 1.99
HOXB1-201ENST00000239174 MYT1Q01538 1121 aa27.41■■□□□ 1.98
HOXB1-201ENST00000239174 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
HOXB1-201ENST00000239174 ACIN1Q9UKV3 1341 aaKnown RBP27.27■■□□□ 1.96
HOXB1-201ENST00000239174 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
HOXB1-201ENST00000239174 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
HOXB1-201ENST00000239174 WIZO95785 1651 aa27.04■■□□□ 1.92
HOXB1-201ENST00000239174 CENPBP07199 599 aaPredicted RBP27.03■■□□□ 1.92
HOXB1-201ENST00000239174 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
HOXB1-201ENST00000239174 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.91
HOXB1-201ENST00000239174 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
HOXB1-201ENST00000239174 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
HOXB1-201ENST00000239174 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
HOXB1-201ENST00000239174 GTF3C3Q9Y5Q9 886 aa26.84■■□□□ 1.89
HOXB1-201ENST00000239174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
HOXB1-201ENST00000239174 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
HOXB1-201ENST00000239174 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
HOXB1-201ENST00000239174 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
HOXB1-201ENST00000239174 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
HOXB1-201ENST00000239174 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
HOXB1-201ENST00000239174 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.84
HOXB1-201ENST00000239174 ZNF316A6NFI3 1004 aaPredicted RBP26.56■■□□□ 1.84
HOXB1-201ENST00000239174 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
HOXB1-201ENST00000239174 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
HOXB1-201ENST00000239174 TNIKQ9UKE5 1360 aa26.5■■□□□ 1.83
HOXB1-201ENST00000239174 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
HOXB1-201ENST00000239174 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
HOXB1-201ENST00000239174 EEA1Q15075 1411 aa26.44■■□□□ 1.82
HOXB1-201ENST00000239174 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
HOXB1-201ENST00000239174 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
HOXB1-201ENST00000239174 CLSPNQ9HAW4 1339 aa26.24■■□□□ 1.79
HOXB1-201ENST00000239174 CSRNP3Q8WYN3 585 aa26.17■■□□□ 1.78
HOXB1-201ENST00000239174 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
HOXB1-201ENST00000239174 MIER1Q8N108 512 aa26.15■■□□□ 1.78
HOXB1-201ENST00000239174 GOLGA3Q08378 1498 aa26.15■■□□□ 1.78
HOXB1-201ENST00000239174 SOGA1O94964 1423 aa26.14■■□□□ 1.78
HOXB1-201ENST00000239174 DNAJC5BQ9UF47 199 aa26.1■■□□□ 1.77
HOXB1-201ENST00000239174 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
HOXB1-201ENST00000239174 UBTFP17480 764 aaKnown RBP25.98■■□□□ 1.75
HOXB1-201ENST00000239174 TTBK1Q5TCY1 1321 aaPredicted RBP25.95■■□□□ 1.74
HOXB1-201ENST00000239174 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
HOXB1-201ENST00000239174 KIF21BO75037 1637 aa25.94■■□□□ 1.74
HOXB1-201ENST00000239174 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
HOXB1-201ENST00000239174 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
HOXB1-201ENST00000239174 CFTRP13569 1480 aa25.86■■□□□ 1.73
HOXB1-201ENST00000239174 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
HOXB1-201ENST00000239174 CLIP1P30622 1438 aa25.81■■□□□ 1.72
HOXB1-201ENST00000239174 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
HOXB1-201ENST00000239174 SUPT16HQ9Y5B9 1047 aaKnown RBP25.75■■□□□ 1.71
HOXB1-201ENST00000239174 NESP48681 1621 aa25.74■■□□□ 1.71
HOXB1-201ENST00000239174 APLP2Q06481 763 aa25.66■■□□□ 1.7
HOXB1-201ENST00000239174 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.7
HOXB1-201ENST00000239174 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
HOXB1-201ENST00000239174 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
HOXB1-201ENST00000239174 TSHZ2Q9NRE2 1034 aa25.55■■□□□ 1.68
HOXB1-201ENST00000239174 ANP32EQ9BTT0 268 aa25.54■■□□□ 1.68
HOXB1-201ENST00000239174 CUX2O14529 1486 aa25.54■■□□□ 1.68
HOXB1-201ENST00000239174 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
HOXB1-201ENST00000239174 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
HOXB1-201ENST00000239174 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
HOXB1-201ENST00000239174 CUX1P39880 1505 aa25.49■■□□□ 1.67
HOXB1-201ENST00000239174 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
HOXB1-201ENST00000239174 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
HOXB1-201ENST00000239174 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
HOXB1-201ENST00000239174 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
HOXB1-201ENST00000239174 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
HOXB1-201ENST00000239174 PRXQ9BXM0 1461 aa25.32■■□□□ 1.64
HOXB1-201ENST00000239174 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
HOXB1-201ENST00000239174 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
HOXB1-201ENST00000239174 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
HOXB1-201ENST00000239174 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
HOXB1-201ENST00000239174 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
HOXB1-201ENST00000239174 DNMBPQ6XZF7 1577 aa25.21■■□□□ 1.63
HOXB1-201ENST00000239174 CCNB3Q8WWL7 1395 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms