RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
GREB1-201ENST00000234142 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
GREB1-201ENST00000234142 CHMP4BQ9H444 224 aaKnown RBP15.41■□□□□ 0.06
GREB1-201ENST00000234142 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
GREB1-201ENST00000234142 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
GREB1-201ENST00000234142 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
GREB1-201ENST00000234142 CFAP53Q96M91 514 aa15.36■□□□□ 0.05
GREB1-201ENST00000234142 FGD1P98174 961 aa15.34■□□□□ 0.05
GREB1-201ENST00000234142 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
GREB1-201ENST00000234142 C14orf37Q86TY3 774 aa15.33■□□□□ 0.05
GREB1-201ENST00000234142 PLCB2Q00722 1185 aa15.33■□□□□ 0.05
GREB1-201ENST00000234142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.042e-9■□□□□ 10.5
GREB1-201ENST00000234142 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
GREB1-201ENST00000234142 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
GREB1-201ENST00000234142 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
GREB1-201ENST00000234142 CDCA8Q53HL2 280 aa15.3■□□□□ 0.04
GREB1-201ENST00000234142 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
GREB1-201ENST00000234142 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
GREB1-201ENST00000234142 NPHP1O15259 732 aa15.3■□□□□ 0.04
GREB1-201ENST00000234142 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
GREB1-201ENST00000234142 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
GREB1-201ENST00000234142 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
GREB1-201ENST00000234142 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
GREB1-201ENST00000234142 MS4A1P11836 297 aa15.28■□□□□ 0.04
GREB1-201ENST00000234142 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
GREB1-201ENST00000234142 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.03
GREB1-201ENST00000234142 KCNJ4P48050 445 aa15.27■□□□□ 0.03
GREB1-201ENST00000234142 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
GREB1-201ENST00000234142 CLSTN1O94985 981 aa15.26■□□□□ 0.03
GREB1-201ENST00000234142 TPRNQ4KMQ1 711 aa15.26■□□□□ 0.03
GREB1-201ENST00000234142 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
GREB1-201ENST00000234142 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
GREB1-201ENST00000234142 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
GREB1-201ENST00000234142 EIF4G2P78344 907 aaKnown RBP eCLIP15.25■□□□□ 0.03
GREB1-201ENST00000234142 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
GREB1-201ENST00000234142 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
GREB1-201ENST00000234142 MCCP23508 829 aa15.23■□□□□ 0.03
GREB1-201ENST00000234142 OS9Q13438 667 aaPredicted RBP15.22■□□□□ 0.03
GREB1-201ENST00000234142 PTMSP20962 102 aa15.22■□□□□ 0.03
GREB1-201ENST00000234142 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■■□□□ 12.1
GREB1-201ENST00000234142 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
GREB1-201ENST00000234142 KNSTRNQ9Y448 316 aa15.2■□□□□ 0.02
GREB1-201ENST00000234142 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
GREB1-201ENST00000234142 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
GREB1-201ENST00000234142 HSCBQ8IWL3 235 aa15.19■□□□□ 0.02
GREB1-201ENST00000234142 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
GREB1-201ENST00000234142 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
GREB1-201ENST00000234142 GOLGA6L1Q8N7Z2 621 aa15.17■□□□□ 0.02
GREB1-201ENST00000234142 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
GREB1-201ENST00000234142 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
GREB1-201ENST00000234142 NOP58Q9Y2X3 529 aaKnown RBP15.14■□□□□ 0.01
GREB1-201ENST00000234142 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
GREB1-201ENST00000234142 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
GREB1-201ENST00000234142 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
GREB1-201ENST00000234142 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
GREB1-201ENST00000234142 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
GREB1-201ENST00000234142 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
GREB1-201ENST00000234142 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
GREB1-201ENST00000234142 TPM4P67936 248 aa15.11■□□□□ 0.01
GREB1-201ENST00000234142 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
GREB1-201ENST00000234142 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
GREB1-201ENST00000234142 ABCC9O60706 1549 aa15.09■□□□□ 0.01
GREB1-201ENST00000234142 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
GREB1-201ENST00000234142 SYAP1Q96A49 352 aaPredicted RBP15.08■□□□□ 0.01
GREB1-201ENST00000234142 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
GREB1-201ENST00000234142 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
GREB1-201ENST00000234142 SETQ01105 290 aaPredicted RBP15.05■□□□□ 0
GREB1-201ENST00000234142 GBP4Q96PP9 640 aa15.04■□□□□ -0
GREB1-201ENST00000234142 KIAA1211Q6ZU35 1233 aa15.04■□□□□ -0
GREB1-201ENST00000234142 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
GREB1-201ENST00000234142 RGS3P49796 1198 aa15.04■□□□□ -0
GREB1-201ENST00000234142 ISY1Q9ULR0 285 aaKnown RBP15.04■□□□□ -0
GREB1-201ENST00000234142 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
GREB1-201ENST00000234142 CEP89Q96ST8 783 aa15□□□□□ -0.01
GREB1-201ENST00000234142 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
GREB1-201ENST00000234142 MIER1Q8N108 512 aa14.99□□□□□ -0.01
GREB1-201ENST00000234142 CSPP1Q1MSJ5 1256 aa14.99□□□□□ -0.01
GREB1-201ENST00000234142 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
GREB1-201ENST00000234142 TMX4Q9H1E5 349 aaPredicted RBP14.97□□□□□ -0.01
GREB1-201ENST00000234142 POGKQ9P215 609 aa14.96□□□□□ -0.01
GREB1-201ENST00000234142 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.02
GREB1-201ENST00000234142 NEUROD2Q15784 382 aa14.96□□□□□ -0.02
GREB1-201ENST00000234142 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
GREB1-201ENST00000234142 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
GREB1-201ENST00000234142 PHF14O94880 888 aa14.94□□□□□ -0.02
GREB1-201ENST00000234142 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
GREB1-201ENST00000234142 TPM3P06753 285 aa14.92□□□□□ -0.02
GREB1-201ENST00000234142 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
GREB1-201ENST00000234142 GPATCH3Q96I76 525 aa14.91□□□□□ -0.02
GREB1-201ENST00000234142 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
GREB1-201ENST00000234142 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
GREB1-201ENST00000234142 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
GREB1-201ENST00000234142 CALD1Q05682 793 aaKnown RBP14.89□□□□□ -0.03
GREB1-201ENST00000234142 RTF1Q92541 710 aaKnown RBP14.89□□□□□ -0.03
GREB1-201ENST00000234142 HDGFP51858 240 aaKnown RBP14.89□□□□□ -0.03
GREB1-201ENST00000234142 HIRIP3Q9BW71 556 aaPredicted RBP14.89□□□□□ -0.03
GREB1-201ENST00000234142 PLEKHD1A6NEE1 506 aa14.88□□□□□ -0.03
GREB1-201ENST00000234142 HDAC5Q9UQL6 1122 aa14.88□□□□□ -0.03
GREB1-201ENST00000234142 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
GREB1-201ENST00000234142 CCDC70Q6NSX1 233 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms