RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
FMR1-201ENST00000218200 CARMIL1Q5VZK9 1371 aa28.51■■■□□ 2.15
FMR1-201ENST00000218200 CHIC2Q9UKJ5 165 aa28.48■■■□□ 2.15
FMR1-201ENST00000218200 TONSLQ96HA7 1378 aa28.48■■■□□ 2.15
FMR1-201ENST00000218200 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
FMR1-201ENST00000218200 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
FMR1-201ENST00000218200 MTUS2Q5JR59 1369 aa28.39■■■□□ 2.14
FMR1-201ENST00000218200 CADPSQ9ULU8 1353 aa28.39■■■□□ 2.14
FMR1-201ENST00000218200 CCDC136Q96JN2 1154 aa28.37■■■□□ 2.13
FMR1-201ENST00000218200 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
FMR1-201ENST00000218200 CANXP27824 592 aaKnown RBP28.35■■■□□ 2.13
FMR1-201ENST00000218200 MRS2Q9HD23 443 aa28.34■■■□□ 2.13
FMR1-201ENST00000218200 CCNB3Q8WWL7 1395 aa28.33■■■□□ 2.13
FMR1-201ENST00000218200 ARXQ96QS3 562 aa28.33■■■□□ 2.13
FMR1-201ENST00000218200 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
FMR1-201ENST00000218200 ANP32EQ9BTT0 268 aa28.28■■■□□ 2.12
FMR1-201ENST00000218200 SUPT16HQ9Y5B9 1047 aaKnown RBP28.26■■■□□ 2.11
FMR1-201ENST00000218200 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
FMR1-201ENST00000218200 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
FMR1-201ENST00000218200 ZBTB47Q9UFB7 747 aaPredicted RBP28.23■■■□□ 2.11
FMR1-201ENST00000218200 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
FMR1-201ENST00000218200 TMC1Q8TDI8 760 aa28.18■■■□□ 2.1
FMR1-201ENST00000218200 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
FMR1-201ENST00000218200 TDRD9Q8NDG6 1382 aaKnown RBP28.13■■■□□ 2.09
FMR1-201ENST00000218200 RRP7BPQ9NSQ0 103 aa28.11■■■□□ 2.09
FMR1-201ENST00000218200 KDM2AQ9Y2K7 1162 aa28.11■■■□□ 2.09
FMR1-201ENST00000218200 KIF21BO75037 1637 aa28.1■■■□□ 2.09
FMR1-201ENST00000218200 IGF1RP08069 1367 aa28.08■■■□□ 2.09
FMR1-201ENST00000218200 CFTRP13569 1480 aa28.03■■■□□ 2.08
FMR1-201ENST00000218200 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
FMR1-201ENST00000218200 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
FMR1-201ENST00000218200 RTN4Q9NQC3 1192 aaKnown RBP28.02■■■□□ 2.08
FMR1-201ENST00000218200 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
FMR1-201ENST00000218200 SLC24A1O60721 1099 aa28■■■□□ 2.07
FMR1-201ENST00000218200 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
FMR1-201ENST00000218200 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
FMR1-201ENST00000218200 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
FMR1-201ENST00000218200 RAB3GAP2Q9H2M9 1393 aa27.96■■■□□ 2.07
FMR1-201ENST00000218200 B4GALNT3Q6L9W6 998 aa27.94■■■□□ 2.06
FMR1-201ENST00000218200 SETD5Q9C0A6 1442 aa27.94■■■□□ 2.06
FMR1-201ENST00000218200 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
FMR1-201ENST00000218200 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
FMR1-201ENST00000218200 PRXQ9BXM0 1461 aa27.93■■■□□ 2.06
FMR1-201ENST00000218200 CUX1P39880 1505 aa27.93■■■□□ 2.06
FMR1-201ENST00000218200 DHX57Q6P158 1386 aaKnown RBP27.92■■■□□ 2.06
FMR1-201ENST00000218200 EIF4G2P78344 907 aaKnown RBP eCLIP27.91■■■□□ 2.06
FMR1-201ENST00000218200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.9■■■□□ 2.068e-7■■□□□ 12.1
FMR1-201ENST00000218200 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
FMR1-201ENST00000218200 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
FMR1-201ENST00000218200 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
FMR1-201ENST00000218200 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
FMR1-201ENST00000218200 HSP90AA1P07900 732 aaKnown RBP27.83■■■□□ 2.05
FMR1-201ENST00000218200 CHGAP10645 457 aaKnown RBP27.83■■■□□ 2.05
FMR1-201ENST00000218200 LAS1LQ9Y4W2 734 aaKnown RBP27.83■■■□□ 2.05
FMR1-201ENST00000218200 RBM19Q9Y4C8 960 aaKnown RBP27.83■■■□□ 2.05
FMR1-201ENST00000218200 SENP3Q9H4L4 574 aaPredicted RBP27.82■■■□□ 2.04
FMR1-201ENST00000218200 FMN1Q68DA7 1419 aa27.81■■■□□ 2.04
FMR1-201ENST00000218200 TSHZ2Q9NRE2 1034 aa27.74■■■□□ 2.03
FMR1-201ENST00000218200 KCNH8Q96L42 1107 aa27.73■■■□□ 2.03
FMR1-201ENST00000218200 RGL3Q3MIN7 710 aa27.7■■■□□ 2.02
FMR1-201ENST00000218200 CFDP1Q9UEE9 299 aaPredicted RBP27.7■■■□□ 2.02
FMR1-201ENST00000218200 UPF2Q9HAU5 1272 aaKnown RBP27.69■■■□□ 2.02
FMR1-201ENST00000218200 TSPY4P0CV99 314 aa27.68■■■□□ 2.02
FMR1-201ENST00000218200 TSPY10P0CW01 314 aa27.68■■■□□ 2.02
FMR1-201ENST00000218200 NESP48681 1621 aa27.68■■■□□ 2.02
FMR1-201ENST00000218200 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
FMR1-201ENST00000218200 ERCC6Q03468 1493 aa27.66■■■□□ 2.02
FMR1-201ENST00000218200 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
FMR1-201ENST00000218200 NEFMP07197 916 aa27.65■■■□□ 2.02
FMR1-201ENST00000218200 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
FMR1-201ENST00000218200 WDR43Q15061 677 aaKnown RBP eCLIP27.64■■■□□ 2.01
FMR1-201ENST00000218200 PHLDB1Q86UU1 1377 aa27.62■■■□□ 2.01
FMR1-201ENST00000218200 PPP4R2Q9NY27 417 aa27.61■■■□□ 2.01
FMR1-201ENST00000218200 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.59■■■□□ 2.01
FMR1-201ENST00000218200 PPP1R15AO75807 674 aaPredicted RBP27.56■■■□□ 2
FMR1-201ENST00000218200 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
FMR1-201ENST00000218200 LRRC9Q6ZRR7 1453 aa27.56■■■□□ 2
FMR1-201ENST00000218200 RRBP1Q9P2E9 1410 aaKnown RBP27.56■■■□□ 2
FMR1-201ENST00000218200 NOP58Q9Y2X3 529 aaKnown RBP27.55■■■□□ 2
FMR1-201ENST00000218200 RGS3P49796 1198 aa27.54■■■□□ 2
FMR1-201ENST00000218200 DEKP35659 375 aaKnown RBP27.54■■■□□ 2
FMR1-201ENST00000218200 FOXD1Q16676 465 aa27.52■■■□□ 2
FMR1-201ENST00000218200 ANP32BQ92688 251 aaKnown RBP27.51■■□□□ 1.99
FMR1-201ENST00000218200 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
FMR1-201ENST00000218200 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
FMR1-201ENST00000218200 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
FMR1-201ENST00000218200 NEUROD2Q15784 382 aa27.46■■□□□ 1.99
FMR1-201ENST00000218200 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
FMR1-201ENST00000218200 MPHOSPH9Q99550 1183 aa27.41■■□□□ 1.98
FMR1-201ENST00000218200 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
FMR1-201ENST00000218200 CARD11Q9BXL7 1154 aa27.38■■□□□ 1.97
FMR1-201ENST00000218200 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.977e-6■■□□□ 12.2
FMR1-201ENST00000218200 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
FMR1-201ENST00000218200 HSPA5P11021 654 aaKnown RBP27.35■■□□□ 1.97
FMR1-201ENST00000218200 PLPPR3Q6T4P5 718 aa27.34■■□□□ 1.97
FMR1-201ENST00000218200 CC2D1BQ5T0F9 858 aaKnown RBP27.32■■□□□ 1.96
FMR1-201ENST00000218200 TIAM1Q13009 1591 aa27.32■■□□□ 1.96
FMR1-201ENST00000218200 DNMBPQ6XZF7 1577 aa27.32■■□□□ 1.96
FMR1-201ENST00000218200 CCDC18Q5T9S5 1454 aa27.29■■□□□ 1.96
FMR1-201ENST00000218200 GLIPR1L2Q4G1C9 344 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms