RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FKBP8Q14318 412 aa13.82□□□□□ -0.2
TUBB1-201ENST00000217133 PRDM2Q13029 1718 aa13.82□□□□□ -0.2
TUBB1-201ENST00000217133 NEFLP07196 543 aa13.82□□□□□ -0.2
TUBB1-201ENST00000217133 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
TUBB1-201ENST00000217133 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
TUBB1-201ENST00000217133 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
TUBB1-201ENST00000217133 BIVM-ERCC5R4GMW8 1640 aa13.8□□□□□ -0.2
TUBB1-201ENST00000217133 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
TUBB1-201ENST00000217133 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
TUBB1-201ENST00000217133 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.21
TUBB1-201ENST00000217133 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
TUBB1-201ENST00000217133 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
TUBB1-201ENST00000217133 IGF1RP08069 1367 aa13.73□□□□□ -0.21
TUBB1-201ENST00000217133 FBLN2P98095 1184 aa13.71□□□□□ -0.21
TUBB1-201ENST00000217133 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.21
TUBB1-201ENST00000217133 WDR62O43379 1518 aa13.69□□□□□ -0.22
TUBB1-201ENST00000217133 RBM19Q9Y4C8 960 aaKnown RBP13.68□□□□□ -0.22
TUBB1-201ENST00000217133 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
TUBB1-201ENST00000217133 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
TUBB1-201ENST00000217133 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
TUBB1-201ENST00000217133 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
TUBB1-201ENST00000217133 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
TUBB1-201ENST00000217133 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
TUBB1-201ENST00000217133 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
TUBB1-201ENST00000217133 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
TUBB1-201ENST00000217133 ANP32CO43423 234 aa13.64□□□□□ -0.23
TUBB1-201ENST00000217133 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
TUBB1-201ENST00000217133 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
TUBB1-201ENST00000217133 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
TUBB1-201ENST00000217133 HIRIP3Q9BW71 556 aaPredicted RBP13.61□□□□□ -0.23
TUBB1-201ENST00000217133 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
TUBB1-201ENST00000217133 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
TUBB1-201ENST00000217133 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
TUBB1-201ENST00000217133 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
TUBB1-201ENST00000217133 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
TUBB1-201ENST00000217133 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
TUBB1-201ENST00000217133 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
TUBB1-201ENST00000217133 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
TUBB1-201ENST00000217133 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
TUBB1-201ENST00000217133 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
TUBB1-201ENST00000217133 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
TUBB1-201ENST00000217133 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
TUBB1-201ENST00000217133 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.24
TUBB1-201ENST00000217133 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
TUBB1-201ENST00000217133 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
TUBB1-201ENST00000217133 ABCA5Q8WWZ7 1642 aa13.51□□□□□ -0.25
TUBB1-201ENST00000217133 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
TUBB1-201ENST00000217133 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
TUBB1-201ENST00000217133 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
TUBB1-201ENST00000217133 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
TUBB1-201ENST00000217133 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
TUBB1-201ENST00000217133 MSH5O43196 834 aa13.47□□□□□ -0.25
TUBB1-201ENST00000217133 TONSLQ96HA7 1378 aa13.46□□□□□ -0.26
TUBB1-201ENST00000217133 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
TUBB1-201ENST00000217133 PHLDB1Q86UU1 1377 aa13.43□□□□□ -0.26
TUBB1-201ENST00000217133 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
TUBB1-201ENST00000217133 ARID3CA6NKF2 412 aa13.42□□□□□ -0.26
TUBB1-201ENST00000217133 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
TUBB1-201ENST00000217133 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
TUBB1-201ENST00000217133 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
TUBB1-201ENST00000217133 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
TUBB1-201ENST00000217133 GRIN2AQ12879 1464 aa13.37□□□□□ -0.27
TUBB1-201ENST00000217133 SYNJ2O15056 1496 aa13.37□□□□□ -0.27
TUBB1-201ENST00000217133 CUL7Q14999 1698 aa13.36□□□□□ -0.27
TUBB1-201ENST00000217133 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
TUBB1-201ENST00000217133 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
TUBB1-201ENST00000217133 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
TUBB1-201ENST00000217133 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
TUBB1-201ENST00000217133 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
TUBB1-201ENST00000217133 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
TUBB1-201ENST00000217133 ERICH6BQ5W0A0 696 aa13.31□□□□□ -0.28
TUBB1-201ENST00000217133 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
TUBB1-201ENST00000217133 FAM9BQ8IZU0 186 aa13.28□□□□□ -0.28
TUBB1-201ENST00000217133 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
TUBB1-201ENST00000217133 DEKP35659 375 aaKnown RBP13.28□□□□□ -0.28
TUBB1-201ENST00000217133 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
TUBB1-201ENST00000217133 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
TUBB1-201ENST00000217133 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
TUBB1-201ENST00000217133 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
TUBB1-201ENST00000217133 NBR1Q14596 966 aa13.24□□□□□ -0.29
TUBB1-201ENST00000217133 MRS2Q9HD23 443 aa13.24□□□□□ -0.29
TUBB1-201ENST00000217133 NUP160Q12769 1436 aa13.24□□□□□ -0.29
TUBB1-201ENST00000217133 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBB1-201ENST00000217133 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
TUBB1-201ENST00000217133 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
TUBB1-201ENST00000217133 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
TUBB1-201ENST00000217133 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
TUBB1-201ENST00000217133 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
TUBB1-201ENST00000217133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
TUBB1-201ENST00000217133 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
TUBB1-201ENST00000217133 CHD1O14646 1710 aa13.21□□□□□ -0.29
TUBB1-201ENST00000217133 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.29
TUBB1-201ENST00000217133 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
TUBB1-201ENST00000217133 CCDC184Q52MB2 194 aa13.21□□□□□ -0.3
TUBB1-201ENST00000217133 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
TUBB1-201ENST00000217133 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
TUBB1-201ENST00000217133 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
TUBB1-201ENST00000217133 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
TUBB1-201ENST00000217133 RRP7BPQ9NSQ0 103 aa13.17□□□□□ -0.3
TUBB1-201ENST00000217133 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms