RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 RRP7BPQ9NSQ0 103 aa31.08■■■□□ 2.57
TARBP1-201ENST00000040877 KCNH8Q96L42 1107 aa31.06■■■□□ 2.56
TARBP1-201ENST00000040877 MRS2Q9HD23 443 aa31.04■■■□□ 2.56
TARBP1-201ENST00000040877 CFDP1Q9UEE9 299 aaPredicted RBP31.01■■■□□ 2.55
TARBP1-201ENST00000040877 NPM2Q86SE8 214 aaKnown RBP30.95■■■□□ 2.54
TARBP1-201ENST00000040877 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
TARBP1-201ENST00000040877 SCAF1Q9H7N4 1312 aaKnown RBP30.93■■■□□ 2.54
TARBP1-201ENST00000040877 PPP1R15AO75807 674 aaPredicted RBP30.92■■■□□ 2.54
TARBP1-201ENST00000040877 SALL2Q9Y467 1007 aaPredicted RBP30.92■■■□□ 2.54
TARBP1-201ENST00000040877 HSP90AA1P07900 732 aaKnown RBP30.92■■■□□ 2.54
TARBP1-201ENST00000040877 CDCA8Q53HL2 280 aa30.89■■■□□ 2.54
TARBP1-201ENST00000040877 CCDC136Q96JN2 1154 aa30.88■■■□□ 2.53
TARBP1-201ENST00000040877 FHAD1B1AJZ9 1412 aa30.84■■■□□ 2.53
TARBP1-201ENST00000040877 ANP32BQ92688 251 aaKnown RBP30.79■■■□□ 2.52
TARBP1-201ENST00000040877 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
TARBP1-201ENST00000040877 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
TARBP1-201ENST00000040877 RGL3Q3MIN7 710 aa30.72■■■□□ 2.51
TARBP1-201ENST00000040877 EIF5BO60841 1220 aaKnown RBP30.72■■■□□ 2.51
TARBP1-201ENST00000040877 MYH16Q9H6N6 1097 aa30.71■■■□□ 2.51
TARBP1-201ENST00000040877 CARMIL1Q5VZK9 1371 aa30.71■■■□□ 2.51
TARBP1-201ENST00000040877 CFAP53Q96M91 514 aa30.7■■■□□ 2.51
TARBP1-201ENST00000040877 MIER1Q8N108 512 aa30.67■■■□□ 2.5
TARBP1-201ENST00000040877 CCNB3Q8WWL7 1395 aa30.67■■■□□ 2.5
TARBP1-201ENST00000040877 HIRIP3Q9BW71 556 aaPredicted RBP30.66■■■□□ 2.5
TARBP1-201ENST00000040877 CUX2O14529 1486 aa30.66■■■□□ 2.5
TARBP1-201ENST00000040877 ARID4BQ4LE39 1312 aaPredicted RBP30.64■■■□□ 2.49
TARBP1-201ENST00000040877 KNSTRNQ9Y448 316 aa30.63■■■□□ 2.49
TARBP1-201ENST00000040877 CARD11Q9BXL7 1154 aa30.62■■■□□ 2.49
TARBP1-201ENST00000040877 C14orf37Q86TY3 774 aa30.6■■■□□ 2.49
TARBP1-201ENST00000040877 SMARCA2P51531 1590 aa30.59■■■□□ 2.49
TARBP1-201ENST00000040877 PDS5BQ9NTI5 1447 aa30.5■■■□□ 2.47
TARBP1-201ENST00000040877 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
TARBP1-201ENST00000040877 TIMELESSQ9UNS1 1208 aa30.48■■■□□ 2.47
TARBP1-201ENST00000040877 KANK1Q14678 1352 aa30.46■■■□□ 2.47
TARBP1-201ENST00000040877 ZBTB7CA1YPR0 619 aa30.44■■■□□ 2.46
TARBP1-201ENST00000040877 SOGA1O94964 1423 aa30.43■■■□□ 2.46
TARBP1-201ENST00000040877 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
TARBP1-201ENST00000040877 NUDCQ9Y266 331 aa30.41■■■□□ 2.46
TARBP1-201ENST00000040877 CARMIL2Q6F5E8 1435 aa30.41■■■□□ 2.46
TARBP1-201ENST00000040877 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
TARBP1-201ENST00000040877 POGKQ9P215 609 aa30.41■■■□□ 2.46
TARBP1-201ENST00000040877 SENP3Q9H4L4 574 aaPredicted RBP30.38■■■□□ 2.45
TARBP1-201ENST00000040877 VPS8Q8N3P4 1428 aa30.36■■■□□ 2.45
TARBP1-201ENST00000040877 A0A0G2JS52 829 aa30.35■■■□□ 2.45
TARBP1-201ENST00000040877 HAP1P54257 671 aaPredicted RBP30.35■■■□□ 2.45
TARBP1-201ENST00000040877 NBR1Q14596 966 aa30.35■■■□□ 2.45
TARBP1-201ENST00000040877 HDGFP51858 240 aaKnown RBP30.34■■■□□ 2.45
TARBP1-201ENST00000040877 MAPK8IP3Q9UPT6 1336 aa30.34■■■□□ 2.45
TARBP1-201ENST00000040877 GLIPR1L2Q4G1C9 344 aa30.32■■■□□ 2.44
TARBP1-201ENST00000040877 SIN3AQ96ST3 1273 aa30.32■■■□□ 2.44
TARBP1-201ENST00000040877 ARHGAP35Q9NRY4 1499 aa30.31■■■□□ 2.44
TARBP1-201ENST00000040877 IRX6P78412 446 aaPredicted RBP30.3■■■□□ 2.44
TARBP1-201ENST00000040877 BECN1Q14457 450 aa30.27■■■□□ 2.44
TARBP1-201ENST00000040877 PPM1GO15355 546 aaPredicted RBP30.27■■■□□ 2.44
TARBP1-201ENST00000040877 DDRGK1Q96HY6 314 aa30.27■■■□□ 2.44
TARBP1-201ENST00000040877 TMF1P82094 1093 aa30.27■■■□□ 2.44
TARBP1-201ENST00000040877 FMN1Q68DA7 1419 aa30.27■■■□□ 2.44
TARBP1-201ENST00000040877 PNNQ9H307 717 aaKnown RBP30.24■■■□□ 2.43
TARBP1-201ENST00000040877 PLEKHG5O94827 1062 aa30.23■■■□□ 2.43
TARBP1-201ENST00000040877 SETD5Q9C0A6 1442 aa30.23■■■□□ 2.43
TARBP1-201ENST00000040877 CHMP4BQ9H444 224 aaKnown RBP30.21■■■□□ 2.43
TARBP1-201ENST00000040877 FTSJ3Q8IY81 847 aaKnown RBP30.2■■■□□ 2.43
TARBP1-201ENST00000040877 DCAF11Q8TEB1 546 aa30.2■■■□□ 2.43
TARBP1-201ENST00000040877 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
TARBP1-201ENST00000040877 ANP32EQ9BTT0 268 aa30.18■■■□□ 2.42
TARBP1-201ENST00000040877 MS4A1P11836 297 aa30.16■■■□□ 2.42
TARBP1-201ENST00000040877 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
TARBP1-201ENST00000040877 CASC1Q6TDU7 716 aa30.12■■■□□ 2.41
TARBP1-201ENST00000040877 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
TARBP1-201ENST00000040877 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
TARBP1-201ENST00000040877 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
TARBP1-201ENST00000040877 NEUROD2Q15784 382 aa30.08■■■□□ 2.41
TARBP1-201ENST00000040877 NCLP19338 710 aaKnown RBP30.07■■■□□ 2.4
TARBP1-201ENST00000040877 GOLGA6L22H0YM25 854 aa30.06■■■□□ 2.4
TARBP1-201ENST00000040877 LMOD2Q6P5Q4 547 aa30.05■■■□□ 2.4
TARBP1-201ENST00000040877 SUPT16HQ9Y5B9 1047 aaKnown RBP30.05■■■□□ 2.4
TARBP1-201ENST00000040877 CC2D1BQ5T0F9 858 aaKnown RBP30.04■■■□□ 2.4
TARBP1-201ENST00000040877 PKD2Q13563 968 aa30.03■■■□□ 2.4
TARBP1-201ENST00000040877 ANKRD30AQ9BXX3 1397 aa30.03■■■□□ 2.4
TARBP1-201ENST00000040877 LAS1LQ9Y4W2 734 aaKnown RBP30.03■■■□□ 2.4
TARBP1-201ENST00000040877 U2SURPO15042 1029 aaKnown RBP30■■■□□ 2.39
TARBP1-201ENST00000040877 PPP4R2Q9NY27 417 aa29.99■■■□□ 2.39
TARBP1-201ENST00000040877 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
TARBP1-201ENST00000040877 RAPGEF2Q9Y4G8 1499 aa29.98■■■□□ 2.39
TARBP1-201ENST00000040877 SRPK2P78362 688 aaKnown RBP29.98■■■□□ 2.39
TARBP1-201ENST00000040877 GGT6Q6P531 493 aa29.98■■■□□ 2.39
TARBP1-201ENST00000040877 TNNT2P45379 298 aaPredicted RBP29.97■■■□□ 2.39
TARBP1-201ENST00000040877 CCER2I3L3R5 266 aa29.97■■■□□ 2.39
TARBP1-201ENST00000040877 KANK4Q5T7N3 995 aaPredicted RBP29.97■■■□□ 2.39
TARBP1-201ENST00000040877 RSPH4AQ5TD94 716 aa29.97■■■□□ 2.39
TARBP1-201ENST00000040877 MLECQ14165 292 aa29.96■■■□□ 2.39
TARBP1-201ENST00000040877 ARXQ96QS3 562 aa29.95■■■□□ 2.39
TARBP1-201ENST00000040877 MORC1Q86VD1 984 aa29.93■■■□□ 2.38
TARBP1-201ENST00000040877 FRAT1Q92837 279 aaPredicted RBP29.9■■■□□ 2.38
TARBP1-201ENST00000040877 NUP155O75694 1391 aa29.9■■■□□ 2.38
TARBP1-201ENST00000040877 WIZO95785 1651 aa29.9■■■□□ 2.38
TARBP1-201ENST00000040877 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.37
TARBP1-201ENST00000040877 HSPA5P11021 654 aaKnown RBP29.88■■■□□ 2.37
TARBP1-201ENST00000040877 MPHOSPH9Q99550 1183 aa29.88■■■□□ 2.37
TARBP1-201ENST00000040877 HDGFL2Q7Z4V5 671 aaPredicted RBP29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms