RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 TIMELESSQ9UNS1 1208 aa7.42□□□□□ -1.22
CDH17-201ENST00000027335 KIF13AQ9H1H9 1805 aa7.42□□□□□ -1.22
CDH17-201ENST00000027335 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
CDH17-201ENST00000027335 CCDC88BA6NC98 1476 aa7.42□□□□□ -1.22
CDH17-201ENST00000027335 ZEB1P37275 1124 aaPredicted RBP7.41□□□□□ -1.22
CDH17-201ENST00000027335 SHROOM2Q13796 1616 aa7.41□□□□□ -1.22
CDH17-201ENST00000027335 BCL11AQ9H165 835 aa7.41□□□□□ -1.22
CDH17-201ENST00000027335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
CDH17-201ENST00000027335 ZNF608Q9ULD9 1512 aaPredicted RBP7.38□□□□□ -1.23
CDH17-201ENST00000027335 HNRNPUL2Q1KMD3 747 aaKnown RBP7.38□□□□□ -1.23
CDH17-201ENST00000027335 CSRNP3Q8WYN3 585 aa7.38□□□□□ -1.23
CDH17-201ENST00000027335 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
CDH17-201ENST00000027335 HOMEZQ8IX15 550 aa7.37□□□□□ -1.23
CDH17-201ENST00000027335 ITGAEP38570 1179 aa7.36□□□□□ -1.23
CDH17-201ENST00000027335 TULP1O00294 542 aaPredicted RBP7.36□□□□□ -1.23
CDH17-201ENST00000027335 SYNJ2O15056 1496 aa7.34□□□□□ -1.23
CDH17-201ENST00000027335 WRNQ14191 1432 aaPredicted RBP eCLIP7.32□□□□□ -1.24
CDH17-201ENST00000027335 PBRM1Q86U86 1689 aa7.32□□□□□ -1.24
CDH17-201ENST00000027335 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
CDH17-201ENST00000027335 YTHDC1Q96MU7 727 aaKnown RBP7.31□□□□□ -1.24
CDH17-201ENST00000027335 P3H3Q8IVL6 736 aa7.31□□□□□ -1.24
CDH17-201ENST00000027335 GAPVD1Q14C86 1478 aa7.31□□□□□ -1.24
CDH17-201ENST00000027335 SOGA1O94964 1423 aa7.3□□□□□ -1.24
CDH17-201ENST00000027335 GRIN2BQ13224 1484 aa7.29□□□□□ -1.24
CDH17-201ENST00000027335 FBLN2P98095 1184 aa7.29□□□□□ -1.24
CDH17-201ENST00000027335 GLI2P10070 1586 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 CYB5RLQ6IPT4 315 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 DIP2BQ9P265 1576 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 ABCC10Q5T3U5 1492 aa7.28□□□□□ -1.24
CDH17-201ENST00000027335 POLA1P09884 1462 aaPredicted RBP7.27□□□□□ -1.25
CDH17-201ENST00000027335 TRHP20396 242 aaPredicted RBP7.27□□□□□ -1.25
CDH17-201ENST00000027335 ILDR1Q86SU0 546 aaPredicted RBP7.27□□□□□ -1.25
CDH17-201ENST00000027335 PLEKHG5O94827 1062 aa7.26□□□□□ -1.25
CDH17-201ENST00000027335 KCNA4P22459 653 aa7.26□□□□□ -1.25
CDH17-201ENST00000027335 NUP160Q12769 1436 aa7.26□□□□□ -1.25
CDH17-201ENST00000027335 SNAPC4Q5SXM2 1469 aa7.25□□□□□ -1.25
CDH17-201ENST00000027335 ARID3CA6NKF2 412 aa7.24□□□□□ -1.25
CDH17-201ENST00000027335 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
CDH17-201ENST00000027335 KDM6BO15054 1643 aa7.24□□□□□ -1.25
CDH17-201ENST00000027335 TOP2BQ02880 1626 aa7.24□□□□□ -1.25
CDH17-201ENST00000027335 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
CDH17-201ENST00000027335 CEP170Q5SW79 1584 aa7.23□□□□□ -1.25
CDH17-201ENST00000027335 TAOK2Q9UL54 1235 aa7.23□□□□□ -1.25
CDH17-201ENST00000027335 ADAMTS12P58397 1594 aa7.21□□□□□ -1.26
CDH17-201ENST00000027335 HECW2Q9P2P5 1572 aa7.2□□□□□ -1.26
CDH17-201ENST00000027335 ABCA10Q8WWZ4 1543 aa7.2□□□□□ -1.26
CDH17-201ENST00000027335 AQRO60306 1485 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDH17-201ENST00000027335 CACNB1Q02641 598 aaPredicted RBP7.19□□□□□ -1.26
CDH17-201ENST00000027335 PPRC1Q5VV67 1664 aaKnown RBP7.19□□□□□ -1.26
CDH17-201ENST00000027335 KIAA0586Q9BVV6 1533 aa7.18□□□□□ -1.26
CDH17-201ENST00000027335 MAPK8IP2Q13387 824 aaPredicted RBP7.17□□□□□ -1.26
CDH17-201ENST00000027335 DIEXFQ68CQ4 756 aaKnown RBP7.17□□□□□ -1.26
CDH17-201ENST00000027335 FBXO41Q8TF61 875 aa7.17□□□□□ -1.26
CDH17-201ENST00000027335 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
CDH17-201ENST00000027335 ERICH3Q5RHP9 1530 aa7.16□□□□□ -1.26
CDH17-201ENST00000027335 TDRD9Q8NDG6 1382 aaKnown RBP7.16□□□□□ -1.26
CDH17-201ENST00000027335 CEP162Q5TB80 1403 aa7.16□□□□□ -1.26
CDH17-201ENST00000027335 FAM50AQ14320 339 aaKnown RBP7.16□□□□□ -1.26
CDH17-201ENST00000027335 KDM4FA0A1W2PPD8 638 aa7.15□□□□□ -1.26
CDH17-201ENST00000027335 TPRNQ4KMQ1 711 aa7.15□□□□□ -1.26
CDH17-201ENST00000027335 KIF27Q86VH2 1401 aa7.15□□□□□ -1.27
CDH17-201ENST00000027335 BCANQ96GW7 911 aa7.14□□□□□ -1.27
CDH17-201ENST00000027335 MAP3K4Q9Y6R4 1608 aa7.14□□□□□ -1.27
CDH17-201ENST00000027335 CLIP1P30622 1438 aa7.13□□□□□ -1.27
CDH17-201ENST00000027335 DCAF8L1A6NGE4 600 aa7.13□□□□□ -1.27
CDH17-201ENST00000027335 ADGRL1O94910 1474 aa7.13□□□□□ -1.27
CDH17-201ENST00000027335 GOLGA3Q08378 1498 aa7.13□□□□□ -1.27
CDH17-201ENST00000027335 ADCY10Q96PN6 1610 aa7.13□□□□□ -1.27
CDH17-201ENST00000027335 NPM2Q86SE8 214 aaKnown RBP7.13□□□□□ -1.27
CDH17-201ENST00000027335 FGD5Q6ZNL6 1462 aa7.12□□□□□ -1.27
CDH17-201ENST00000027335 EEA1Q15075 1411 aa7.12□□□□□ -1.27
CDH17-201ENST00000027335 UHRF1BP1LA0JNW5 1464 aa7.12□□□□□ -1.27
CDH17-201ENST00000027335 TNIKQ9UKE5 1360 aa7.11□□□□□ -1.27
CDH17-201ENST00000027335 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
CDH17-201ENST00000027335 CNGB1Q14028 1251 aaPredicted RBP7.11□□□□□ -1.27
CDH17-201ENST00000027335 FHAD1B1AJZ9 1412 aa7.1□□□□□ -1.27
CDH17-201ENST00000027335 CHMP7Q8WUX9 453 aaPredicted RBP7.1□□□□□ -1.27
CDH17-201ENST00000027335 RAD54L2Q9Y4B4 1467 aa7.1□□□□□ -1.27
CDH17-201ENST00000027335 RAPGEF2Q9Y4G8 1499 aa7.1□□□□□ -1.27
CDH17-201ENST00000027335 CARMIL1Q5VZK9 1371 aa7.1□□□□□ -1.27
CDH17-201ENST00000027335 BIVM-ERCC5R4GMW8 1640 aa7.1□□□□□ -1.27
CDH17-201ENST00000027335 CUX1P39880 1505 aa7.09□□□□□ -1.27
CDH17-201ENST00000027335 TEX14Q8IWB6 1497 aa7.08□□□□□ -1.28
CDH17-201ENST00000027335 IQSEC2Q5JU85 1478 aa7.08□□□□□ -1.28
CDH17-201ENST00000027335 C14orf37Q86TY3 774 aa7.07□□□□□ -1.28
CDH17-201ENST00000027335 PLB1Q6P1J6 1458 aa7.07□□□□□ -1.28
CDH17-201ENST00000027335 POLR3GLQ9BT43 218 aa7.07□□□□□ -1.28
CDH17-201ENST00000027335 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
CDH17-201ENST00000027335 ADAMTSL3P82987 1691 aa7.06□□□□□ -1.28
CDH17-201ENST00000027335 SCAF1Q9H7N4 1312 aaKnown RBP7.05□□□□□ -1.28
CDH17-201ENST00000027335 ZNF316A6NFI3 1004 aaPredicted RBP7.04□□□□□ -1.28
CDH17-201ENST00000027335 CFAP43Q8NDM7 1665 aa7.04□□□□□ -1.28
CDH17-201ENST00000027335 IGF1RP08069 1367 aa7.04□□□□□ -1.28
CDH17-201ENST00000027335 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
CDH17-201ENST00000027335 TRIM52Q96A61 297 aa7.03□□□□□ -1.28
CDH17-201ENST00000027335 PDIA4P13667 645 aaKnown RBP7.03□□□□□ -1.28
CDH17-201ENST00000027335 SOCS7O14512 581 aa7.02□□□□□ -1.29
CDH17-201ENST00000027335 MAGI3Q5TCQ9 1506 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms