RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 AEBP2Q6ZN18 517 aaPredicted RBP10.4□□□□□ -0.74
CDH17-201ENST00000027335 NISCHQ9Y2I1 1504 aa9.91□□□□□ -0.82
CDH17-201ENST00000027335 CHIC1Q5VXU3 224 aa9.58□□□□□ -0.88
CDH17-201ENST00000027335 CCDC180Q9P1Z9 1646 aa9.42□□□□□ -0.9
CDH17-201ENST00000027335 ABCC9O60706 1549 aa9.15□□□□□ -0.94
CDH17-201ENST00000027335 RB1CC1Q8TDY2 1594 aa8.96□□□□□ -0.97
CDH17-201ENST00000027335 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
CDH17-201ENST00000027335 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
CDH17-201ENST00000027335 NACADO15069 1562 aa8.88□□□□□ -0.99
CDH17-201ENST00000027335 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
CDH17-201ENST00000027335 MYO15BQ96JP2 1530 aa8.86□□□□□ -0.99
CDH17-201ENST00000027335 SENP3Q9H4L4 574 aaPredicted RBP8.78□□□□□ -1
CDH17-201ENST00000027335 SLC24A1O60721 1099 aa8.78□□□□□ -1
CDH17-201ENST00000027335 PHF23Q9BUL5 403 aaPredicted RBP8.76□□□□□ -1.01
CDH17-201ENST00000027335 UNC13AQ9UPW8 1703 aa8.74□□□□□ -1.01
CDH17-201ENST00000027335 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.01
CDH17-201ENST00000027335 BICRAQ9NZM4 1560 aa8.66□□□□□ -1.02
CDH17-201ENST00000027335 CUX2O14529 1486 aa8.54□□□□□ -1.04
CDH17-201ENST00000027335 CC2D2AQ9P2K1 1620 aa8.51□□□□□ -1.05
CDH17-201ENST00000027335 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
CDH17-201ENST00000027335 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
CDH17-201ENST00000027335 MYT1Q01538 1121 aa8.48□□□□□ -1.05
CDH17-201ENST00000027335 CECR2Q9BXF3 1484 aa8.47□□□□□ -1.05
CDH17-201ENST00000027335 EIF4G1Q04637 1599 aaKnown RBP8.43□□□□□ -1.06
CDH17-201ENST00000027335 POTEDQ86YR6 584 aa8.42□□□□□ -1.06
CDH17-201ENST00000027335 FOXD1Q16676 465 aa8.36□□□□□ -1.07
CDH17-201ENST00000027335 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
CDH17-201ENST00000027335 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
CDH17-201ENST00000027335 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDH17-201ENST00000027335 ZCCHC6Q5VYS8 1495 aaKnown RBP8.18□□□□□ -1.1
CDH17-201ENST00000027335 THOC2Q8NI27 1593 aaKnown RBP8.14□□□□□ -1.11
CDH17-201ENST00000027335 DAXXQ9UER7 740 aaPredicted RBP8.13□□□□□ -1.11
CDH17-201ENST00000027335 HMGXB3Q12766 1538 aa8.12□□□□□ -1.11
CDH17-201ENST00000027335 NCAPD3P42695 1498 aa8.11□□□□□ -1.11
CDH17-201ENST00000027335 EHMT2Q96KQ7 1210 aa8.1□□□□□ -1.11
CDH17-201ENST00000027335 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
CDH17-201ENST00000027335 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
CDH17-201ENST00000027335 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
CDH17-201ENST00000027335 SCRIBQ14160 1630 aa8.03□□□□□ -1.12
CDH17-201ENST00000027335 PEG3Q9GZU2 1588 aa8.02□□□□□ -1.13
CDH17-201ENST00000027335 ERCC6Q03468 1493 aa8.01□□□□□ -1.13
CDH17-201ENST00000027335 PRKCSHP14314 528 aaPredicted RBP8□□□□□ -1.13
CDH17-201ENST00000027335 WDR62O43379 1518 aa7.96□□□□□ -1.14
CDH17-201ENST00000027335 APLP2Q06481 763 aa7.95□□□□□ -1.14
CDH17-201ENST00000027335 FAM9AQ8IZU1 332 aaPredicted RBP7.95□□□□□ -1.14
CDH17-201ENST00000027335 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
CDH17-201ENST00000027335 ATAD2BQ9ULI0 1458 aa7.9□□□□□ -1.15
CDH17-201ENST00000027335 KIF21AQ7Z4S6 1674 aa7.88□□□□□ -1.15
CDH17-201ENST00000027335 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
CDH17-201ENST00000027335 PCGF6Q9BYE7 350 aa7.86□□□□□ -1.15
CDH17-201ENST00000027335 MRC2Q9UBG0 1479 aa7.85□□□□□ -1.15
CDH17-201ENST00000027335 SMARCA4P51532 1647 aa7.85□□□□□ -1.15
CDH17-201ENST00000027335 PIAS4Q8N2W9 510 aaPredicted RBP7.84□□□□□ -1.15
CDH17-201ENST00000027335 RIMBP3CA6NJZ7 1639 aa7.83□□□□□ -1.16
CDH17-201ENST00000027335 RIMBP3BA6NNM3 1639 aa7.83□□□□□ -1.16
CDH17-201ENST00000027335 RIMBP3Q9UFD9 1639 aa7.83□□□□□ -1.16
CDH17-201ENST00000027335 TRIM41Q8WV44 630 aa7.79□□□□□ -1.16
CDH17-201ENST00000027335 MSH5O43196 834 aa7.78□□□□□ -1.16
CDH17-201ENST00000027335 NCBP3Q53F19 620 aaKnown RBP7.78□□□□□ -1.16
CDH17-201ENST00000027335 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CDH17-201ENST00000027335 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
CDH17-201ENST00000027335 WDR97A6NE52 1622 aa7.75□□□□□ -1.17
CDH17-201ENST00000027335 NESP48681 1621 aa7.74□□□□□ -1.17
CDH17-201ENST00000027335 BAZ1BQ9UIG0 1483 aaKnown RBP7.74□□□□□ -1.17
CDH17-201ENST00000027335 RSF1Q96T23 1441 aaPredicted RBP7.72□□□□□ -1.17
CDH17-201ENST00000027335 ARHGEF11O15085 1522 aa7.71□□□□□ -1.18
CDH17-201ENST00000027335 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
CDH17-201ENST00000027335 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
CDH17-201ENST00000027335 RTN4Q9NQC3 1192 aaKnown RBP7.69□□□□□ -1.18
CDH17-201ENST00000027335 OSCARQ8IYS5 282 aa7.69□□□□□ -1.18
CDH17-201ENST00000027335 CADPSQ9ULU8 1353 aa7.69□□□□□ -1.18
CDH17-201ENST00000027335 PLPPR3Q6T4P5 718 aa7.68□□□□□ -1.18
CDH17-201ENST00000027335 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
CDH17-201ENST00000027335 ADRA2BP18089 450 aa7.65□□□□□ -1.18
CDH17-201ENST00000027335 PPP6R1Q9UPN7 881 aa7.65□□□□□ -1.19
CDH17-201ENST00000027335 IFT140Q96RY7 1462 aa7.63□□□□□ -1.19
CDH17-201ENST00000027335 EIF5BO60841 1220 aaKnown RBP7.61□□□□□ -1.19
CDH17-201ENST00000027335 CFTRP13569 1480 aa7.6□□□□□ -1.19
CDH17-201ENST00000027335 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
CDH17-201ENST00000027335 MROH2BQ7Z745 1585 aa7.59□□□□□ -1.19
CDH17-201ENST00000027335 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
CDH17-201ENST00000027335 CLASP1Q7Z460 1538 aa7.59□□□□□ -1.19
CDH17-201ENST00000027335 ARAP1Q96P48 1450 aa7.59□□□□□ -1.19
CDH17-201ENST00000027335 ARXQ96QS3 562 aa7.57□□□□□ -1.2
CDH17-201ENST00000027335 FANCD2Q9BXW9 1451 aa7.56□□□□□ -1.2
CDH17-201ENST00000027335 URB2Q14146 1524 aaKnown RBP7.55□□□□□ -1.2
CDH17-201ENST00000027335 CHD1O14646 1710 aa7.55□□□□□ -1.2
CDH17-201ENST00000027335 EIF4G3O43432 1585 aaKnown RBP7.53□□□□□ -1.2
CDH17-201ENST00000027335 HRCP23327 699 aa7.51□□□□□ -1.21
CDH17-201ENST00000027335 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
CDH17-201ENST00000027335 CCER1Q8TC90 406 aaPredicted RBP7.51□□□□□ -1.21
CDH17-201ENST00000027335 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
CDH17-201ENST00000027335 WIZO95785 1651 aa7.51□□□□□ -1.21
CDH17-201ENST00000027335 TARBP1Q13395 1621 aaKnown RBP7.5□□□□□ -1.21
CDH17-201ENST00000027335 SYNJ1O43426 1573 aa7.48□□□□□ -1.21
CDH17-201ENST00000027335 ERCC6L2Q5T890 1561 aa7.48□□□□□ -1.21
CDH17-201ENST00000027335 DNMBPQ6XZF7 1577 aa7.48□□□□□ -1.21
CDH17-201ENST00000027335 ATP1B4Q9UN42 357 aaPredicted RBP7.46□□□□□ -1.21
CDH17-201ENST00000027335 TOP2AP11388 1531 aaKnown RBP7.44□□□□□ -1.22
CDH17-201ENST00000027335 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms