RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Fkbp15Q6P9Q6 1216 aaKnown RBP18.11■□□□□ 0.49
Rnf40-202ENSMUST00000205694 Ccer2J3QPU5 274 aa18.1■□□□□ 0.49
Rnf40-202ENSMUST00000205694 Prdm10Q3UTQ7 1184 aa18.09■□□□□ 0.49
Rnf40-202ENSMUST00000205694 DaxxO35613 739 aa18.07■□□□□ 0.48
Rnf40-202ENSMUST00000205694 Polr3glQ8R0C0 218 aa18.07■□□□□ 0.48
Rnf40-202ENSMUST00000205694 Mapk8ip2Q9ERE9 830 aa18.06■□□□□ 0.48
Rnf40-202ENSMUST00000205694 Ccdc88bQ4QRL3 1481 aa18■□□□□ 0.47
Rnf40-202ENSMUST00000205694 Setd5Q5XJV7 1441 aa17.93■□□□□ 0.46
Rnf40-202ENSMUST00000205694 DiexfQ8BTT6 772 aaKnown RBP17.93■□□□□ 0.46
Rnf40-202ENSMUST00000205694 Frmpd1A2AKB4 1549 aa17.92■□□□□ 0.46
Rnf40-202ENSMUST00000205694 Sall2Q9QX96 1004 aa17.89■□□□□ 0.45
Rnf40-202ENSMUST00000205694 Arhgap27A2AB59 869 aa17.87■□□□□ 0.45
Rnf40-202ENSMUST00000205694 Wdr62Q3U3T8 1523 aa17.87■□□□□ 0.45
Rnf40-202ENSMUST00000205694 Upf2A2AT37 1269 aaKnown RBP17.86■□□□□ 0.45
Rnf40-202ENSMUST00000205694 LrpprcQ6PB66 1392 aaKnown RBP17.85■□□□□ 0.45
Rnf40-202ENSMUST00000205694 Clstn2Q9ER65 966 aa17.85■□□□□ 0.45
Rnf40-202ENSMUST00000205694 Eea1Q8BL66 1411 aa17.83■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Plppr3Q7TPB0 716 aa17.83■□□□□ 0.44
Rnf40-202ENSMUST00000205694 ArxO35085 564 aa17.82■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Csrnp3P59055 597 aa17.81■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Chic2Q9D9G3 165 aa17.81■□□□□ 0.44
Rnf40-202ENSMUST00000205694 BlmO88700 1416 aa17.8■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Anks4bQ8K3X6 423 aa17.79■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Dhx29Q6PGC1 1365 aaKnown RBP17.78■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Mrc2Q64449 1479 aa17.78■□□□□ 0.44
Rnf40-202ENSMUST00000205694 Cc2d2aQ8CFW7 1633 aa17.77■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Baz1bQ9Z277 1479 aa17.75■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Cep162Q6ZQ06 1403 aa17.75■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Calr4Q3TQS0 420 aa17.75■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Mrs2Q5NCE8 434 aa17.74■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Rad21Q61550 635 aaKnown RBP17.71■□□□□ 0.43
Rnf40-202ENSMUST00000205694 Rangap1P46061 589 aaKnown RBP17.7■□□□□ 0.42
Rnf40-202ENSMUST00000205694 Gm38655A0A286YDK6 273 aa17.7■□□□□ 0.42
Rnf40-202ENSMUST00000205694 Ppp4r2Q0VGB7 417 aa17.69■□□□□ 0.42
Rnf40-202ENSMUST00000205694 Aplp2Q06335 707 aa17.64■□□□□ 0.41
Rnf40-202ENSMUST00000205694 Safb2Q80YR5 991 aaKnown RBP17.64■□□□□ 0.41
Rnf40-202ENSMUST00000205694 Carmil1Q6EDY6 1374 aa17.63■□□□□ 0.41
Rnf40-202ENSMUST00000205694 AknaQ80VW7 1404 aa17.63■□□□□ 0.41
Rnf40-202ENSMUST00000205694 Rpap1Q80TE0 1409 aa17.6■□□□□ 0.41
Rnf40-202ENSMUST00000205694 Wdr43Q6ZQL4 677 aaKnown RBP17.6■□□□□ 0.41
Rnf40-202ENSMUST00000205694 Efcab5A0JP43 1406 aa17.57■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Fgd1P52734 960 aa17.56■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Top2aQ01320 1528 aaKnown RBP17.56■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Rapgef2Q8CHG7 1496 aa17.55■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Kif27Q7M6Z4 1394 aa17.55■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Top2bQ64511 1612 aa17.55■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Lamc3Q9R0B6 1581 aa17.53■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Urb2E9Q7L1 1524 aaKnown RBP17.53■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Rgl3Q3UYI5 709 aa17.53■□□□□ 0.4
Rnf40-202ENSMUST00000205694 Shroom4Q1W617 1475 aa17.53■□□□□ 0.4
Rnf40-202ENSMUST00000205694 P3h3Q8CG70 732 aa17.52■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Hsp90aa1P07901 733 aaKnown RBP17.51■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Duox2A2AQ99 1517 aa17.49■□□□□ 0.39
Rnf40-202ENSMUST00000205694 NrkQ9R0G8 1455 aa17.49■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Aebp1Q640N1 1128 aa17.49■□□□□ 0.39
Rnf40-202ENSMUST00000205694 PogzQ8BZH4 1409 aaKnown RBP17.48■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Dnajc5bQ9CQ94 199 aa17.48■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Grin2bQ01097 1482 aa17.47■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Fam135aQ6NS59 1506 aa17.47■□□□□ 0.39
Rnf40-202ENSMUST00000205694 Camsap1A2AHC3 1581 aa17.44■□□□□ 0.38
Rnf40-202ENSMUST00000205694 Fyco1Q8VDC1 1437 aa17.44■□□□□ 0.38
Rnf40-202ENSMUST00000205694 CntlnA2AM05 1397 aa17.43■□□□□ 0.38
Rnf40-202ENSMUST00000205694 Trim26Q99PN3 545 aa17.43■□□□□ 0.38
Rnf40-202ENSMUST00000205694 IqubQ8CDK3 788 aa17.42■□□□□ 0.38
Rnf40-202ENSMUST00000205694 Pabpn1Q8CCS6 302 aaKnown RBP17.42■□□□□ 0.38
Rnf40-202ENSMUST00000205694 Thoc2B1AZI6 1594 aaKnown RBP17.42■□□□□ 0.38
Rnf40-202ENSMUST00000205694 DekQ7TNV0 380 aaKnown RBP17.42■□□□□ 0.38
Rnf40-202ENSMUST00000205694 CatipB9EKE5 520 aa17.41■□□□□ 0.38
Rnf40-202ENSMUST00000205694 Ift140E9PY46 1464 aa17.39■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Dhx57Q6P5D3 1388 aaKnown RBP17.39■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Polr1aO35134 1717 aaKnown RBP17.39■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Crocc2F6XLV1 1638 aa17.37■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Mtus2Q3UHD3 1353 aa17.37■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Kdm2aP59997 1161 aa17.37■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Ofd1Q80Z25 1017 aa17.37■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Ppp1r18Q8BQ30 594 aa17.36■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Trim30dE9PWL0 497 aa17.36■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Srpk2O54781 681 aaKnown RBP17.36■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Mroh3A0A1D5RM54 893 aa17.36■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Rad54l2Q99NG0 1466 aa17.35■□□□□ 0.37
Rnf40-202ENSMUST00000205694 CanxP35564 591 aaKnown RBP17.34■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Grwd1Q810D6 446 aaKnown RBP17.34■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Hsp90ab1P11499 724 aaKnown RBP17.34■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Ccdc9Q8VC31 543 aaKnown RBP17.34■□□□□ 0.37
Rnf40-202ENSMUST00000205694 Plb1Q3TTY0 1478 aa17.32■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Cwc22Q8C5N3 908 aaKnown RBP17.32■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Vsig10D3YX43 558 aa17.32■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Card11Q8CIS0 1159 aa17.32■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Exosc9Q9JHI7 438 aaKnown RBP17.31■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Gm20521D3Z5F7 333 aa17.3■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Cc2d2bA0A286YDU8 1405 aa17.29■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Irx6Q9ER75 438 aa17.29■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Trim44Q9QXA7 346 aa17.28■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Soga1E1U8D0 1418 aa17.28■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Mia2Q91ZV0 1396 aa17.27■□□□□ 0.36
Rnf40-202ENSMUST00000205694 Map3k1P53349 1493 aa17.27■□□□□ 0.35
Rnf40-202ENSMUST00000205694 WrnO09053 1401 aa17.27■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Arid3cA6PWV5 409 aa17.26■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Mapk8ip3Q9ESN9 1337 aa17.26■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Rrp7aQ9D1C9 280 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms