RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Ccdc136Q3TVA9 1136 aa15.75■□□□□ 0.11
Pdlim5-209ENSMUST00000196908 Ccdc18Q640L5 1455 aa15.75■□□□□ 0.11
Pdlim5-209ENSMUST00000196908 Cacnb1Q8R3Z5 597 aa15.72■□□□□ 0.11
Pdlim5-209ENSMUST00000196908 Pprc1Q6NZN1 1644 aa15.65■□□□□ 0.1
Pdlim5-209ENSMUST00000196908 Disp1Q3TDN0 1521 aa15.63■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 PogzQ8BZH4 1409 aaKnown RBP15.63■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 Ppargc1bQ8VHJ7 1014 aa15.62■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 Cc2d2bA0A286YDU8 1405 aa15.6■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 Fgd6Q69ZL1 1399 aa15.6■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 Ppp1r18Q8BQ30 594 aa15.59■□□□□ 0.09
Pdlim5-209ENSMUST00000196908 Egfem1Q8C088 590 aa15.58■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Nup160Q9Z0W3 1402 aaKnown RBP15.56■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Golga3P55937 1487 aa15.56■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Camsap1A2AHC3 1581 aa15.56■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Grwd1Q810D6 446 aaKnown RBP15.55■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Rapgef2Q8CHG7 1496 aa15.54■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Ythdc2B2RR83 1445 aaKnown RBP15.54■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Slc4a1apE9PX68 744 aa15.54■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Duox2A2AQ99 1517 aa15.53■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 AknaQ80VW7 1404 aa15.53■□□□□ 0.08
Pdlim5-209ENSMUST00000196908 Zbtb7aO88939 569 aaKnown RBP15.49■□□□□ 0.07
Pdlim5-209ENSMUST00000196908 Abcc1O35379 1528 aa15.48■□□□□ 0.07
Pdlim5-209ENSMUST00000196908 TnnQ80Z71 1560 aa15.47■□□□□ 0.07
Pdlim5-209ENSMUST00000196908 WdpcpQ8C456 722 aa15.47■□□□□ 0.07
Pdlim5-209ENSMUST00000196908 Znf703P0CL69 594 aa15.46■□□□□ 0.07
Pdlim5-209ENSMUST00000196908 Pbrm1Q8BSQ9 1634 aaKnown RBP15.46■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Setd1bQ8CFT2 1985 aa15.45■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Ildr2B5TVM2 661 aa15.44■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 AqrQ8CFQ3 1481 aaKnown RBP15.44■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Setbp1Q9Z180 1582 aa15.43■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Rtl1Q7M732 1744 aa15.41■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Cypt1Q8CH20 168 aa15.41■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Top2aQ01320 1528 aaKnown RBP15.4■□□□□ 0.06
Pdlim5-209ENSMUST00000196908 Cyb5rlB1AS42 316 aa15.39■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Samd9lQ69Z37 1561 aa15.39■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 CadpsQ80TJ1 1355 aa15.38■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Rad54l2Q99NG0 1466 aa15.37■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Ccdc88bQ4QRL3 1481 aa15.36■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Ifnlr1Q8CGK5 535 aa15.35■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Soga1E1U8D0 1418 aa15.34■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Grin2aP35436 1464 aa15.34■□□□□ 0.05
Pdlim5-209ENSMUST00000196908 Alpk3Q924C5 1678 aa15.33■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 1700123L14RikQ3V2K7 440 aa15.33■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 Chd1P40201 1711 aa15.31■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 Ak9G3UYQ4 1894 aa15.31■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 Grin2bQ01097 1482 aa15.29■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 Magi3Q9EQJ9 1476 aa15.29■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 MlecQ6ZQI3 291 aaKnown RBP15.28■□□□□ 0.04
Pdlim5-209ENSMUST00000196908 Arhgef11Q68FM7 1552 aa15.26■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 Fbxo41Q6NS60 873 aa15.25■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 EprsQ8CGC7 1512 aaKnown RBP15.25■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 AI481877A2ALV5 1481 aa15.25■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 Efcab5A0JP43 1406 aa15.23■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 AdgbG3UZ78 1657 aa15.22■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 Cngb1E1AZ71 1325 aa15.22■□□□□ 0.03
Pdlim5-209ENSMUST00000196908 Neo1P97798 1493 aa15.2■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Gm14025A2AP89 1413 aa15.19■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Clasp1Q80TV8 1535 aaKnown RBP15.18■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Arhgap27A2AB59 869 aa15.18■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Abcb7Q61102 752 aaKnown RBP15.18■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Mapkbp1Q6NS57 1503 aa15.17■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Ercc6l2Q9JIM3 1537 aa15.17■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Ttc37F8VPK0 1563 aa15.16■□□□□ 0.02
Pdlim5-209ENSMUST00000196908 Dnmt1P13864 1620 aaKnown RBP15.14■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Dnajc5gQ8C632 165 aa15.14■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Hecw2Q6I6G8 1578 aa15.14■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Arid3cA6PWV5 409 aa15.13■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Prr29B1ARI9 187 aa15.13■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Pla2r1Q62028 1487 aa15.12■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 G430095P16RikE9Q913 147 aa15.11■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Kcnn1Q9EQR3 537 aa15.11■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Fmn1Q05860 1466 aa15.11■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 Depdc5P61460 1591 aa15.1■□□□□ 0.01
Pdlim5-209ENSMUST00000196908 BC005561E9Q5E2 1589 aa15.08■□□□□ 0
Pdlim5-209ENSMUST00000196908 Fndc1E9Q043 1732 aa15.08■□□□□ 0
Pdlim5-209ENSMUST00000196908 Brwd3A2AHJ4 1799 aa15.06■□□□□ 0
Pdlim5-209ENSMUST00000196908 Rnf216P58283 853 aa15.05■□□□□ -0
Pdlim5-209ENSMUST00000196908 Arhgef12Q8R4H2 1543 aaKnown RBP15.05■□□□□ -0
Pdlim5-209ENSMUST00000196908 Map3k4O08648 1597 aa15.03■□□□□ -0
Pdlim5-209ENSMUST00000196908 Abcc2Q8VI47 1543 aa15.03■□□□□ -0
Pdlim5-209ENSMUST00000196908 Fkbp15Q6P9Q6 1216 aaKnown RBP15.03■□□□□ -0
Pdlim5-209ENSMUST00000196908 Zfyve16Q80U44 1528 aa15.02■□□□□ -0
Pdlim5-209ENSMUST00000196908 Gpatch8A2A6A1 1505 aa15.02□□□□□ -0.01
Pdlim5-209ENSMUST00000196908 PxdnQ3UQ28 1475 aa14.98□□□□□ -0.01
Pdlim5-209ENSMUST00000196908 SynmQ70IV5 1561 aa14.97□□□□□ -0.01
Pdlim5-209ENSMUST00000196908 Jph4Q80WT0 628 aa14.96□□□□□ -0.01
Pdlim5-209ENSMUST00000196908 Abca16E9PWJ7 1678 aa14.96□□□□□ -0.01
Pdlim5-209ENSMUST00000196908 TchhA0A0B4J1F9 1599 aa14.95□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 Zeb1Q64318 1117 aa14.95□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 NrkQ9R0G8 1455 aa14.95□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 Kdm6bQ5NCY0 1641 aa14.92□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 WizO88286 1684 aaKnown RBP14.91□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 Lrrc9Q8CDN9 1456 aa14.91□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 Slx4Q6P1D7 1565 aa14.9□□□□□ -0.02
Pdlim5-209ENSMUST00000196908 Igf1rQ60751 1373 aa14.89□□□□□ -0.03
Pdlim5-209ENSMUST00000196908 Znf608Q56A10 1511 aa14.88□□□□□ -0.03
Pdlim5-209ENSMUST00000196908 Eif4g1Q6NZJ6 1600 aaKnown RBP14.87□□□□□ -0.03
Pdlim5-209ENSMUST00000196908 Ecm2Q5FW85 670 aa14.86□□□□□ -0.03
Pdlim5-209ENSMUST00000196908 Nkx1-1G3UXB3 402 aa14.85□□□□□ -0.03
Pdlim5-209ENSMUST00000196908 Zbtb12Q9Z150 459 aa14.82□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms