RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Samd9lQ69Z37 1561 aa20.02■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Crocc2F6XLV1 1638 aa20.01■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 Lmo7E9PYF4 1699 aaKnown RBP19.99■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 Naip1Q9QWK5 1403 aa19.99■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 Fyco1Q8VDC1 1437 aa19.97■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 CntlnA2AM05 1397 aa19.97■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 Pcf11G3X9Z4 1553 aa19.96■□□□□ 0.79
Pdlim5-208ENSMUST00000196220 Cux1P53564 1515 aa19.95■□□□□ 0.78
Pdlim5-208ENSMUST00000196220 Kif21aQ9QXL2 1672 aa19.95■□□□□ 0.78
Pdlim5-208ENSMUST00000196220 Peg3Q3URU2 1571 aa19.95■□□□□ 0.78
Pdlim5-208ENSMUST00000196220 Urb2E9Q7L1 1524 aaKnown RBP19.94■□□□□ 0.78
Pdlim5-208ENSMUST00000196220 TchhA0A0B4J1F9 1599 aa19.88■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 BlmO88700 1416 aa19.86■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 Gpatch8A2A6A1 1505 aa19.84■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 Slx4Q6P1D7 1565 aa19.84■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 Ap3b1Q9Z1T1 1105 aa19.84■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 Rad54l2Q99NG0 1466 aa19.84■□□□□ 0.77
Pdlim5-208ENSMUST00000196220 Supt5hO55201 1082 aaKnown RBP19.82■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Pla2r1Q62028 1487 aa19.81■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 EprsQ8CGC7 1512 aaKnown RBP19.81■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Magi3Q9EQJ9 1476 aa19.8■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Kdm5bQ80Y84 1544 aa19.78■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Las1lA2BE28 776 aaKnown RBP19.78■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Plb1Q3TTY0 1478 aa19.77■□□□□ 0.76
Pdlim5-208ENSMUST00000196220 Aebp1Q640N1 1128 aa19.76■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Dnajc5bQ9CQ94 199 aa19.76■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Disp1Q3TDN0 1521 aa19.75■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Grin2aP35436 1464 aa19.75■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Ift140E9PY46 1464 aa19.74■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Pbrm1Q8BSQ9 1634 aaKnown RBP19.74■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Abca5Q8K448 1642 aa19.73■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 CadpsQ80TJ1 1355 aa19.72■□□□□ 0.75
Pdlim5-208ENSMUST00000196220 Gm1043A0A140LJC2 1431 aa19.7■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 Adamts12Q811B3 1600 aa19.7■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 Gm7298A0A0N4SVU1 1476 aa19.68■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 TonslQ6NZL6 1363 aa19.68■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 Nup160Q9Z0W3 1402 aaKnown RBP19.66■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 Soga1E1U8D0 1418 aa19.65■□□□□ 0.74
Pdlim5-208ENSMUST00000196220 Mia2Q91ZV0 1396 aa19.62■□□□□ 0.73
Pdlim5-208ENSMUST00000196220 3425401B19RikD3Z1D3 1412 aa19.6■□□□□ 0.73
Pdlim5-208ENSMUST00000196220 Lmtk2Q3TYD6 1471 aa19.6■□□□□ 0.73
Pdlim5-208ENSMUST00000196220 Fhad1A6PWD2 1420 aa19.6■□□□□ 0.73
Pdlim5-208ENSMUST00000196220 WizO88286 1684 aaKnown RBP19.57■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Ccer2J3QPU5 274 aa19.57■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Cc2d2bA0A286YDU8 1405 aa19.57■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Lmod2Q3UHZ5 550 aa19.55■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Kif27Q7M6Z4 1394 aa19.55■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Setd1bQ8CFT2 1985 aa19.54■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Vps8Q0P5W1 1427 aa19.53■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Sall2Q9QX96 1004 aa19.53■□□□□ 0.72
Pdlim5-208ENSMUST00000196220 Lrriq1Q0P5X1 1673 aa19.51■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 Naip2Q9QUK4 1447 aa19.5■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 ClspnQ80YR7 1315 aa19.5■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 Abca16E9PWJ7 1678 aa19.49■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 PxdnQ3UQ28 1475 aa19.49■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 Ankrd36D3Z4K0 1415 aa19.48■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 Gcc2Q8CHG3 1679 aa19.47■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 Ccnb3Q810T2 1396 aa19.46■□□□□ 0.71
Pdlim5-208ENSMUST00000196220 UacaQ8CGB3 1411 aa19.42■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 A2mQ6GQT1 1474 aa19.42■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 Fam50aQ9WV03 339 aaKnown RBP19.42■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 Aebp2Q9Z248 504 aaKnown RBP19.42■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 NexmifQ5DTT1 1515 aa19.4■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 WrnO09053 1401 aa19.4■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 Wdr66E9Q743 1299 aa19.39■□□□□ 0.7
Pdlim5-208ENSMUST00000196220 Abcc2Q8VI47 1543 aa19.39■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Rapgef6Q5NCJ1 1609 aa19.39■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 BC005561E9Q5E2 1589 aa19.39■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Shroom2A2ALU4 1481 aa19.38■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Rusc2Q80U22 1514 aa19.37■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Rfx7F8VPJ6 1459 aa19.35■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Mug1P28665 1476 aa19.35■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Fhod3Q76LL6 1578 aa19.35■□□□□ 0.69
Pdlim5-208ENSMUST00000196220 Map3k4O08648 1597 aa19.31■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Dhx57Q6P5D3 1388 aaKnown RBP19.31■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Ncoa2Q61026 1462 aa19.3■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Eid3Q3V124 375 aa19.3■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Eif4g3Q80XI3 1579 aaKnown RBP19.3■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Arhgap27A2AB59 869 aa19.29■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Arhgef11Q68FM7 1552 aa19.29■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Ncoa3O09000 1398 aa19.29■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Kiaa1551Q5DTW7 1521 aa19.28■□□□□ 0.68
Pdlim5-208ENSMUST00000196220 Dennd4bQ3U1Y4 1499 aa19.26■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Fam163aQ8CAA5 168 aa19.24■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Camsap2Q8C1B1 1461 aa19.22■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Arhgap31A6X8Z5 1425 aa19.22■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Cdc42bpaQ3UU96 1719 aa19.21■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Cul7Q8VE73 1689 aa19.21■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Dnmt1P13864 1620 aaKnown RBP19.21■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Plekhh2Q8C115 1491 aa19.21■□□□□ 0.67
Pdlim5-208ENSMUST00000196220 Mapkbp1Q6NS57 1503 aa19.2■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Abcc5Q9R1X5 1436 aa19.2■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Ccdc141E9Q8Q6 1531 aa19.19■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Magi1Q6RHR9 1471 aa19.19■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Il16O54824 1322 aa19.18■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Setbp1Q9Z180 1582 aa19.16■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Rrbp1Q99PL5 1605 aaKnown RBP19.16■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 NclP09405 707 aaKnown RBP19.15■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Cdk11bP24788 784 aaKnown RBP19.14■□□□□ 0.66
Pdlim5-208ENSMUST00000196220 Mlh3A0A1Y7VMP7 1443 aa19.14■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms