RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Rad21Q61550 635 aaKnown RBP10.94□□□□□ -0.66
Bdnf-211ENSMUST00000176893 Rtn4Q99P72 1162 aaKnown RBP10.92□□□□□ -0.66
Bdnf-211ENSMUST00000176893 HomezQ80W88 542 aa10.92□□□□□ -0.66
Bdnf-211ENSMUST00000176893 Cnksr2Q80YA9 1032 aa10.89□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Anp32aO35381 247 aa10.88□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Tnnt3Q9QZ47 272 aa10.88□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Pde4cQ3UEI1 686 aa10.88□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Gpatch11Q3UFS4 262 aa10.86□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Aebp2Q9Z248 504 aaKnown RBP10.86□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Znf692Q3U381 531 aa10.86□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Irx3P81067 507 aa10.86□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Brd2Q7JJ13 798 aaKnown RBP10.86□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Gtf3c6Q9D8P7 227 aa10.85□□□□□ -0.67
Bdnf-211ENSMUST00000176893 Dnajc5bQ9CQ94 199 aa10.84□□□□□ -0.67
Bdnf-211ENSMUST00000176893 SafbD3YXK2 937 aaKnown RBP10.83□□□□□ -0.68
Bdnf-211ENSMUST00000176893 Mier1Q5UAK0 511 aa10.83□□□□□ -0.68
Bdnf-211ENSMUST00000176893 Ythdc1E9Q5K9 736 aaKnown RBP10.82□□□□□ -0.68
Bdnf-211ENSMUST00000176893 ScribQ80U72 1612 aa10.8□□□□□ -0.68
Bdnf-211ENSMUST00000176893 Hsp90b1P08113 802 aaKnown RBP10.79□□□□□ -0.68
Bdnf-211ENSMUST00000176893 ClspnQ80YR7 1315 aa10.77□□□□□ -0.69
Bdnf-211ENSMUST00000176893 1700019A02RikA0A087WPV9 146 aa10.76□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Zfp777B9EKF4 885 aa10.76□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Hnrnpul2Q00PI9 745 aaKnown RBP10.75□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Ccdc9Q8VC31 543 aaKnown RBP10.75□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Fam50aQ9WV03 339 aaKnown RBP10.74□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Gab3Q8BSM5 595 aa10.73□□□□□ -0.69
Bdnf-211ENSMUST00000176893 NacadQ5SWP3 1504 aa10.73□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Kdm5dQ62240 1548 aa10.71□□□□□ -0.69
Bdnf-211ENSMUST00000176893 Cep164Q5DU05 1446 aa10.71□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Hmgb1P63158 215 aaKnown RBP10.7□□□□□ -0.7
Bdnf-211ENSMUST00000176893 PtmaP26350 111 aa10.7□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Prm3Q62100 101 aa10.7□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Il27Q8K3I6 234 aa10.7□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Stag3O70576 1240 aa10.69□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Nlrp6Q91WS2 869 aa10.67□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Dmrt2Q8BG36 561 aa10.67□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Upf2A2AT37 1269 aaKnown RBP10.66□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Phf23Q8BSN5 401 aa10.66□□□□□ -0.7
Bdnf-211ENSMUST00000176893 Rbm10Q99KG3 930 aaKnown RBP10.65□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Hs1bp3Q3TC93 395 aa10.64□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Plcd3Q8K2J0 785 aa10.63□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Styxl1Q9DAR2 321 aa10.63□□□□□ -0.71
Bdnf-211ENSMUST00000176893 BbxQ8VBW5 907 aa10.62□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Rbm25B2RY56 838 aaKnown RBP10.62□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Psmd1Q3TXS7 953 aa10.62□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Zfp91Q62511 572 aa10.6□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Vgll3P85442 326 aa10.6□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Aebp1Q640N1 1128 aa10.6□□□□□ -0.71
Bdnf-211ENSMUST00000176893 B4galnt3Q6L8S8 986 aa10.6□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Ccdc27Q3V036 639 aa10.59□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Ccdc96Q9CR92 584 aa10.59□□□□□ -0.71
Bdnf-211ENSMUST00000176893 Hsp90aa1P07901 733 aaKnown RBP10.57□□□□□ -0.72
Bdnf-211ENSMUST00000176893 DekQ7TNV0 380 aaKnown RBP10.57□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Ubl4bQ9CQ84 188 aa10.56□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Nolc1E9Q5C9 702 aaKnown RBP10.55□□□□□ -0.72
Bdnf-211ENSMUST00000176893 NeflP08551 543 aa10.55□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Ipo4Q8VI75 1082 aa10.55□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Ubap1lG3UW59 384 aa10.54□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Tmed8Q3UHI4 326 aa10.53□□□□□ -0.72
Bdnf-211ENSMUST00000176893 ErmnQ5EBJ4 281 aa10.53□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Tmem132aQ922P8 1018 aa10.53□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Stra8P70278 393 aa10.53□□□□□ -0.72
Bdnf-211ENSMUST00000176893 Zbtb38Q3LR78 1197 aa10.51□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Noc3lQ8VI84 807 aaKnown RBP10.51□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Npm1Q61937 292 aaKnown RBP10.5□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Arid4aF8VPQ2 1261 aaKnown RBP10.49□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Ppp1r18Q8BQ30 594 aa10.48□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Polr3glQ8R0C0 218 aa10.48□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Trim26Q99PN3 545 aa10.47□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Gm13695A2AK44 830 aa10.46□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Ap3b1Q9Z1T1 1105 aa10.46□□□□□ -0.73
Bdnf-211ENSMUST00000176893 Rb1cc1Q9ESK9 1588 aa10.46□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Sparcl1P70663 650 aa10.46□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Supt16hQ920B9 1047 aa10.46□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Erich6D3Z6S9 713 aa10.45□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Hs6st3Q9QYK4 470 aa10.45□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Sycp2Q9CUU3 1500 aa10.44□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Zcwpw1Q6IR42 630 aa10.44□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Myt1lP97500 1187 aa10.43□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Stard8Q8K031 1019 aa10.43□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Znf710Q3U288 666 aa10.43□□□□□ -0.74
Bdnf-211ENSMUST00000176893 4933402E13RikQ9D4D2 429 aa10.42□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Calr4Q3TQS0 420 aa10.41□□□□□ -0.74
Bdnf-211ENSMUST00000176893 Dnttip2Q8R2M2 758 aaKnown RBP10.39□□□□□ -0.75
Bdnf-211ENSMUST00000176893 AampJ3QN89 436 aa10.38□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Ppp4r2Q0VGB7 417 aa10.38□□□□□ -0.75
Bdnf-211ENSMUST00000176893 TonslQ6NZL6 1363 aa10.37□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Sh3bp1P55194 680 aa10.36□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Ppp6r1Q7TSI3 856 aa10.36□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Senp3Q9EP97 568 aaKnown RBP10.35□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Kcnn1Q9EQR3 537 aa10.35□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Zbtb4Q5F293 982 aa10.34□□□□□ -0.75
Bdnf-211ENSMUST00000176893 Rsf1E9PWW9 1441 aaKnown RBP10.34□□□□□ -0.75
Bdnf-211ENSMUST00000176893 BcanQ61361 883 aa10.32□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Wdr43Q6ZQL4 677 aaKnown RBP10.32□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Fam43bA2AM80 330 aa10.32□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Irf5P56477 497 aa10.31□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Riok3Q9DBU3 519 aaKnown RBP10.31□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Spryd3E9Q9B3 442 aa10.31□□□□□ -0.76
Bdnf-211ENSMUST00000176893 Pdcl3Q8BVF2 240 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms